RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 VPS53Q5VIR6 699 aa16.35■□□□□ 0.21
SMARCC2-212ENST00000552566 GMCL1P1Q8NEA9 526 aa16.35■□□□□ 0.21
SMARCC2-212ENST00000552566 SLC38A10Q9HBR0 1119 aa16.35■□□□□ 0.21
SMARCC2-212ENST00000552566 INCENPQ9NQS7 918 aa16.35■□□□□ 0.21
SMARCC2-212ENST00000552566 STX8Q9UNK0 236 aa16.35■□□□□ 0.21
SMARCC2-212ENST00000552566 MTMR7Q9Y216 660 aa16.35■□□□□ 0.21
SMARCC2-212ENST00000552566 RBM8AQ9Y5S9 174 aaKnown RBP16.35■□□□□ 0.21
SMARCC2-212ENST00000552566 ATP2A1O14983 1001 aa16.34■□□□□ 0.21
SMARCC2-212ENST00000552566 FGAP02671 866 aa16.34■□□□□ 0.21
SMARCC2-212ENST00000552566 FAM184BQ9ULE4 1060 aa16.34■□□□□ 0.21
SMARCC2-212ENST00000552566 SYNPO2Q9UMS6 1093 aa16.34■□□□□ 0.21
SMARCC2-212ENST00000552566 PHF24Q9UPV7 400 aa16.34■□□□□ 0.21
SMARCC2-212ENST00000552566 A0A0G2JMZ2 1700 aa16.33■□□□□ 0.21
SMARCC2-212ENST00000552566 RANBP6O60518 1105 aaKnown RBP16.33■□□□□ 0.2
SMARCC2-212ENST00000552566 SNAI1O95863 264 aaPredicted RBP16.33■□□□□ 0.2
SMARCC2-212ENST00000552566 SLC1A4P43007 532 aa16.33■□□□□ 0.2
SMARCC2-212ENST00000552566 TLE2Q04725 743 aa16.33■□□□□ 0.2
SMARCC2-212ENST00000552566 GPR153Q6NV75 609 aa16.33■□□□□ 0.2
SMARCC2-212ENST00000552566 SH3RF1Q7Z6J0 888 aa16.33■□□□□ 0.2
SMARCC2-212ENST00000552566 SLC17A8Q8NDX2 589 aa16.33■□□□□ 0.2
SMARCC2-212ENST00000552566 BADQ92934 168 aa16.33■□□□□ 0.2
SMARCC2-212ENST00000552566 TOMM22Q9NS69 142 aa16.33■□□□□ 0.2
SMARCC2-212ENST00000552566 FBXO40Q9UH90 709 aa16.33■□□□□ 0.2
SMARCC2-212ENST00000552566 SZT2Q5T011 3432 aa16.32■□□□□ 0.2
SMARCC2-212ENST00000552566 DNAJC25-GNG10A0A024R161 153 aa16.32■□□□□ 0.2
SMARCC2-212ENST00000552566 FOXP2O15409 715 aa16.32■□□□□ 0.2
SMARCC2-212ENST00000552566 NMT2O60551 498 aa16.32■□□□□ 0.2
SMARCC2-212ENST00000552566 ZMYM6O95789 1325 aa16.32■□□□□ 0.2
SMARCC2-212ENST00000552566 STAT2P52630 851 aa16.32■□□□□ 0.2
SMARCC2-212ENST00000552566 SNAP25P60880 206 aa16.32■□□□□ 0.2
SMARCC2-212ENST00000552566 SNX17Q15036 470 aa16.32■□□□□ 0.2
SMARCC2-212ENST00000552566 MSL3Q8N5Y2 521 aaKnown RBP16.32■□□□□ 0.2
SMARCC2-212ENST00000552566 CHST13Q8NET6 341 aa16.32■□□□□ 0.2
SMARCC2-212ENST00000552566 CHURC1Q8WUH1 139 aa16.32■□□□□ 0.2
SMARCC2-212ENST00000552566 SYNGAP1Q96PV0 1343 aa16.32■□□□□ 0.2
SMARCC2-212ENST00000552566 PDLIM7Q9NR12 457 aa16.32■□□□□ 0.2
SMARCC2-212ENST00000552566 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.32■□□□□ 0.2
SMARCC2-212ENST00000552566 ZNF236Q9UL36 1845 aa16.32■□□□□ 0.2
SMARCC2-212ENST00000552566 BAZ2AQ9UIF9 1905 aaKnown RBP16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 PLIN4Q96Q06 1357 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 A0A1W2PQ45 241 aaPredicted RBP16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 A0A1W2PQY0 241 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 TRIM43BA6NCK2 446 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 PQBP1O60828 265 aaKnown RBP16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 HSPA4P34932 840 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 OAZ1P54368 228 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 ACVR2BQ13705 512 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 KRT32Q14532 448 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 NECTIN1Q15223 517 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 RRP12Q5JTH9 1297 aaKnown RBP16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 PPP4R3BQ5MIZ7 849 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 CREB3L3Q68CJ9 461 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 CCDC174Q6PII3 467 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 MAMDC4Q6UXC1 1216 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 KCTD1Q719H9 257 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 FAM160B2Q86V87 743 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 STAG1Q8WVM7 1258 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 TRIM43Q96BQ3 446 aaPredicted RBP16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 GMCL1Q96IK5 515 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 AGBL1Q96MI9 1066 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 ALPK3Q96L96 1907 aa16.31■□□□□ 0.2
SMARCC2-212ENST00000552566 SYNRGQ9UMZ2 1314 aa16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 POTEB2H3BUK9 544 aa16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 ADAMTS4O75173 837 aa16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 FDX1P10109 184 aa16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 ANAPC15P60006 121 aa16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 TRDNQ13061 729 aa16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 SHHQ15465 462 aa16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 CCDC96Q2M329 555 aa16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 C1orf53Q5VUE5 145 aa16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 ARMCX2Q7L311 632 aa16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 ZNF467Q7Z7K2 595 aaPredicted RBP16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 RNF41Q9H4P4 317 aaPredicted RBP16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 ACAD9Q9H845 621 aa16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 STARD7Q9NQZ5 370 aa16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 IL17RBQ9NRM6 502 aa16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 RNF146Q9NTX7 359 aa16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 MTMR10Q9NXD2 777 aa16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 TACC3Q9Y6A5 838 aa16.3■□□□□ 0.2
SMARCC2-212ENST00000552566 RLFQ13129 1914 aa16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 SLC27A2O14975 620 aa16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 CLTBP09497 229 aa16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 C6orf222P0C671 652 aaPredicted RBP16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 ALAS1P13196 640 aa16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 PSMA5P28066 241 aa16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 ACLYP53396 1101 aa16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 HAND2P61296 217 aa16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 CNTN2Q02246 1040 aa16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 KCNA10Q16322 511 aa16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 C9orf50Q5SZB4 431 aa16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 RCSD1Q6JBY9 416 aa16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 NOL8Q76FK4 1167 aaKnown RBP16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 RASGRP2Q7LDG7 609 aa16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 CCDC144CPQ8IYA2 1237 aa16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 VTI1AQ96AJ9 217 aa16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 FAM161BQ96MY7 647 aa16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 ABHD16BQ9H3Z7 469 aa16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 TMEM39AQ9NV64 488 aa16.29■□□□□ 0.2
SMARCC2-212ENST00000552566 MYADML2A6NDP7 307 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms