RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 LEMD3Q9Y2U8 911 aa12.04□□□□□ -0.48
TGFBR1-209ENST00000552516 RBL2Q08999 1139 aa12.04□□□□□ -0.48
TGFBR1-209ENST00000552516 TAB3Q8N5C8 712 aaPredicted RBP12.04□□□□□ -0.48
TGFBR1-209ENST00000552516 PCIF1Q9H4Z3 704 aa12.04□□□□□ -0.48
TGFBR1-209ENST00000552516 MTF1Q14872 753 aa12.03□□□□□ -0.48
TGFBR1-209ENST00000552516 TBC1D22AQ8WUA7 517 aa12.03□□□□□ -0.48
TGFBR1-209ENST00000552516 PAFAH1B1P43034 410 aa12.03□□□□□ -0.48
TGFBR1-209ENST00000552516 RNF26Q9BY78 433 aaPredicted RBP12.03□□□□□ -0.48
TGFBR1-209ENST00000552516 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.03□□□□□ -0.48
TGFBR1-209ENST00000552516 MROH7-TTC4A0A0A0MT08 1334 aa12.03□□□□□ -0.48
TGFBR1-209ENST00000552516 CTAGE9A4FU28 777 aa12.03□□□□□ -0.48
TGFBR1-209ENST00000552516 NFIAQ12857 509 aa12.03□□□□□ -0.48
TGFBR1-209ENST00000552516 POTEDQ86YR6 584 aa12.03□□□□□ -0.48
TGFBR1-209ENST00000552516 FMR1NBQ8N0W7 255 aaPredicted RBP12.03□□□□□ -0.48
TGFBR1-209ENST00000552516 PRIMPOLQ96LW4 560 aa12.03□□□□□ -0.48
TGFBR1-209ENST00000552516 SPTLC3Q9NUV7 552 aa12.03□□□□□ -0.48
TGFBR1-209ENST00000552516 NKX2-3Q8TAU0 364 aa12.03□□□□□ -0.48
TGFBR1-209ENST00000552516 ARHGEF10LQ9HCE6 1279 aa12.03□□□□□ -0.48
TGFBR1-209ENST00000552516 SHPRHQ149N8 1683 aa12.03□□□□□ -0.48
TGFBR1-209ENST00000552516 SEC31AO94979 1220 aaKnown RBP12.02□□□□□ -0.48
TGFBR1-209ENST00000552516 CTTNQ14247 550 aaKnown RBP12.02□□□□□ -0.48
TGFBR1-209ENST00000552516 NAA35Q5VZE5 725 aa12.02□□□□□ -0.48
TGFBR1-209ENST00000552516 CLEC4GQ6UXB4 293 aa12.02□□□□□ -0.48
TGFBR1-209ENST00000552516 TMTC3Q6ZXV5 915 aa12.02□□□□□ -0.48
TGFBR1-209ENST00000552516 KRT25Q7Z3Z0 450 aa12.02□□□□□ -0.48
TGFBR1-209ENST00000552516 STAG1Q8WVM7 1258 aa12.02□□□□□ -0.48
TGFBR1-209ENST00000552516 CTAGE1Q96RT6 745 aa12.02□□□□□ -0.48
TGFBR1-209ENST00000552516 NEFHP12036 1026 aa12.02□□□□□ -0.48
TGFBR1-209ENST00000552516 CRKP46108 304 aa12.02□□□□□ -0.48
TGFBR1-209ENST00000552516 TRIM28Q13263 835 aaKnown RBP12.02□□□□□ -0.48
TGFBR1-209ENST00000552516 PAGE5Q96GU1 130 aa12.02□□□□□ -0.48
TGFBR1-209ENST00000552516 LUC7LQ9NQ29 371 aaKnown RBP12.02□□□□□ -0.48
TGFBR1-209ENST00000552516 LIFRP42702 1097 aa12.02□□□□□ -0.49
TGFBR1-209ENST00000552516 MAATS1Q7Z4T9 603 aa12.02□□□□□ -0.49
TGFBR1-209ENST00000552516 FBXO11Q86XK2 927 aa12.02□□□□□ -0.49
TGFBR1-209ENST00000552516 TBC1D16Q8TBP0 767 aa12.02□□□□□ -0.49
TGFBR1-209ENST00000552516 ERLIN1O75477 346 aa12.02□□□□□ -0.49
TGFBR1-209ENST00000552516 PPP2R3AQ06190 1150 aa12.02□□□□□ -0.49
TGFBR1-209ENST00000552516 CTAGE15A4D2H0 777 aa12.02□□□□□ -0.49
TGFBR1-209ENST00000552516 CTAGE8P0CG41 777 aa12.02□□□□□ -0.49
TGFBR1-209ENST00000552516 EIF2AK2P19525 551 aaKnown RBP12.02□□□□□ -0.49
TGFBR1-209ENST00000552516 BIRC3Q13489 604 aa12.02□□□□□ -0.49
TGFBR1-209ENST00000552516 ATL3Q6DD88 541 aa12.02□□□□□ -0.49
TGFBR1-209ENST00000552516 CTAGE6Q86UF2 777 aa12.02□□□□□ -0.49
TGFBR1-209ENST00000552516 CTAGE4Q8IX94 777 aa12.02□□□□□ -0.49
TGFBR1-209ENST00000552516 MAP7D2Q96T17 732 aa12.02□□□□□ -0.49
TGFBR1-209ENST00000552516 PICK1Q9NRD5 415 aa12.02□□□□□ -0.49
TGFBR1-209ENST00000552516 PCDHA4Q9UN74 947 aa12.02□□□□□ -0.49
TGFBR1-209ENST00000552516 GAS7O60861 476 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 KRT5P13647 590 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 EARS2Q5JPH6 523 aaKnown RBP12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 UTP14CQ5TAP6 766 aaKnown RBP12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 PAF1Q8N7H5 531 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 NPHP3-ACAD11A0A0J9YXS1 232 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 ANKRD62A6NC57 917 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 BBOX1O75936 387 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 KRT13P13646 458 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 DDIT3P35638 169 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 CYLC1P35663 651 aaPredicted RBP12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 FERMT2Q96AC1 680 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 CDHR2Q9BYE9 1310 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 ECE2O60344 883 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 FCER1AP12319 257 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 EEF2P13639 858 aaKnown RBP12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 CCDC25Q86WR0 208 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 KLHL7Q8IXQ5 586 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 SPATA31A5Q5VU36 1347 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 SPATA31A7Q8IWB4 1347 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 ARHGEF35A5YM69 484 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 TTLL1O95922 423 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 CCDC50Q8IVM0 306 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 SUGCTQ9HAC7 445 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 POLLQ9UGP5 575 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 DNM3Q9UQ16 869 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 KIF20BQ96Q89 1820 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 E9PMD0 336 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 H0YHG0 523 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 FGFR1OPO95684 399 aaKnown RBP12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 BAG6P46379 1132 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 HS2ST1Q7LGA3 356 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 FAM114A1Q8IWE2 563 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 CCDC65Q8IXS2 484 aa12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 FOXP1Q9H334 677 aaPredicted RBP12.01□□□□□ -0.49
TGFBR1-209ENST00000552516 TLDC2A0PJX2 215 aa12□□□□□ -0.49
TGFBR1-209ENST00000552516 FAM83BQ5T0W9 1011 aa12□□□□□ -0.49
TGFBR1-209ENST00000552516 POLR2FP61218 127 aaKnown RBP12□□□□□ -0.49
TGFBR1-209ENST00000552516 IGBP1P78318 339 aa12□□□□□ -0.49
TGFBR1-209ENST00000552516 FMR1Q06787 632 aaKnown RBP eCLIP12□□□□□ -0.492e-7■■■□□ 14.9
TGFBR1-209ENST00000552516 ZMYND15Q9H091 742 aa12□□□□□ -0.49
TGFBR1-209ENST00000552516 MYO1AQ9UBC5 1043 aa12□□□□□ -0.49
TGFBR1-209ENST00000552516 CCPG1Q9ULG6 757 aa12□□□□□ -0.49
TGFBR1-209ENST00000552516 GSTTP1A0A1W2PQM5 241 aa12□□□□□ -0.49
TGFBR1-209ENST00000552516 EXOC3O60645 756 aa12□□□□□ -0.49
TGFBR1-209ENST00000552516 LRRN2O75325 713 aa12□□□□□ -0.49
TGFBR1-209ENST00000552516 EZH2Q15910 746 aaKnown RBP12□□□□□ -0.49
TGFBR1-209ENST00000552516 METTL16Q86W50 562 aaKnown RBP12□□□□□ -0.49
TGFBR1-209ENST00000552516 TDRD7Q8NHU6 1098 aaKnown RBP12□□□□□ -0.49
TGFBR1-209ENST00000552516 KCNF1Q9H3M0 494 aa12□□□□□ -0.49
TGFBR1-209ENST00000552516 PPP2R2CQ9Y2T4 447 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms