RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 C22orf23Q9BZE7 217 aa15.29■□□□□ 0.04
CDK4-212ENST00000552388 UPF3BQ9BZI7 483 aaKnown RBP15.29■□□□□ 0.04
CDK4-212ENST00000552388 BRPF3Q9ULD4 1205 aa15.29■□□□□ 0.04
CDK4-212ENST00000552388 KLRF2D3W0D1 207 aa15.28■□□□□ 0.04
CDK4-212ENST00000552388 TNPO2O14787 897 aaKnown RBP15.28■□□□□ 0.04
CDK4-212ENST00000552388 KIF5BP33176 963 aa15.28■□□□□ 0.04
CDK4-212ENST00000552388 COPB2P35606 906 aa15.28■□□□□ 0.04
CDK4-212ENST00000552388 PRMT2P55345 433 aa15.28■□□□□ 0.04
CDK4-212ENST00000552388 EVCP57679 992 aa15.28■□□□□ 0.04
CDK4-212ENST00000552388 SYNE3Q6ZMZ3 975 aa15.28■□□□□ 0.04
CDK4-212ENST00000552388 CPXCR1Q8N123 301 aa15.28■□□□□ 0.04
CDK4-212ENST00000552388 BRF1Q92994 677 aa15.28■□□□□ 0.04
CDK4-212ENST00000552388 COA7Q96BR5 231 aa15.28■□□□□ 0.04
CDK4-212ENST00000552388 UBA5Q9GZZ9 404 aa15.28■□□□□ 0.04
CDK4-212ENST00000552388 ALDH8A1Q9H2A2 487 aaPredicted RBP15.28■□□□□ 0.04
CDK4-212ENST00000552388 CPVLQ9H3G5 476 aa15.28■□□□□ 0.04
CDK4-212ENST00000552388 MROH8Q9H579 483 aa15.28■□□□□ 0.04
CDK4-212ENST00000552388 UPF2Q9HAU5 1272 aaKnown RBP15.28■□□□□ 0.04
CDK4-212ENST00000552388 CTDP1Q9Y5B0 961 aaPredicted RBP15.28■□□□□ 0.04
CDK4-212ENST00000552388 NID2Q14112 1375 aa15.27■□□□□ 0.04
CDK4-212ENST00000552388 KLF18A0A0U1RQI7 1052 aa15.27■□□□□ 0.04
CDK4-212ENST00000552388 ZBTB43O43298 467 aa15.27■□□□□ 0.04
CDK4-212ENST00000552388 ECM2O94769 699 aaPredicted RBP15.27■□□□□ 0.04
CDK4-212ENST00000552388 ERCC3P19447 782 aa15.27■□□□□ 0.04
CDK4-212ENST00000552388 RXRAP19793 462 aa15.27■□□□□ 0.04
CDK4-212ENST00000552388 HOXD10P28358 340 aa15.27■□□□□ 0.04
CDK4-212ENST00000552388 SMARCA1P28370 1054 aa15.27■□□□□ 0.04
CDK4-212ENST00000552388 APOBRQ0VD83 1088 aa15.27■□□□□ 0.04
CDK4-212ENST00000552388 TOB2Q14106 344 aaPredicted RBP15.27■□□□□ 0.04
CDK4-212ENST00000552388 SNRNP48Q6IEG0 339 aaKnown RBP15.27■□□□□ 0.04
CDK4-212ENST00000552388 GPR142Q7Z601 462 aa15.27■□□□□ 0.04
CDK4-212ENST00000552388 MICU3Q86XE3 530 aa15.27■□□□□ 0.04
CDK4-212ENST00000552388 CCAR1Q8IX12 1150 aaKnown RBP15.27■□□□□ 0.04
CDK4-212ENST00000552388 ADGRF4Q8IZF3 695 aa15.27■□□□□ 0.04
CDK4-212ENST00000552388 FANCBQ8NB91 859 aa15.27■□□□□ 0.04
CDK4-212ENST00000552388 RIOX1Q9H6W3 641 aa15.27■□□□□ 0.04
CDK4-212ENST00000552388 JMJD4Q9H9V9 463 aa15.27■□□□□ 0.04
CDK4-212ENST00000552388 RAVER2Q9HCJ3 691 aaKnown RBP15.27■□□□□ 0.04
CDK4-212ENST00000552388 PDRG1Q9NUG6 133 aa15.27■□□□□ 0.04
CDK4-212ENST00000552388 SRRDQ9UH36 339 aa15.27■□□□□ 0.04
CDK4-212ENST00000552388 LCTP09848 1927 aa15.26■□□□□ 0.03
CDK4-212ENST00000552388 ICAM1P05362 532 aa15.26■□□□□ 0.03
CDK4-212ENST00000552388 GNAQP50148 359 aa15.26■□□□□ 0.03
CDK4-212ENST00000552388 SNAP25P60880 206 aa15.26■□□□□ 0.03
CDK4-212ENST00000552388 SLC35G1Q2M3R5 365 aa15.26■□□□□ 0.03
CDK4-212ENST00000552388 PLEKHH3Q7Z736 793 aa15.26■□□□□ 0.03
CDK4-212ENST00000552388 NCAPG2Q86XI2 1143 aa15.26■□□□□ 0.03
CDK4-212ENST00000552388 MTMR8Q96EF0 704 aa15.26■□□□□ 0.03
CDK4-212ENST00000552388 KIF2CQ99661 725 aa15.26■□□□□ 0.03
CDK4-212ENST00000552388 LZTS2Q9BRK4 669 aa15.26■□□□□ 0.03
CDK4-212ENST00000552388 RBM28Q9NW13 759 aaKnown RBP15.26■□□□□ 0.03
CDK4-212ENST00000552388 GJD2Q9UKL4 321 aa15.26■□□□□ 0.03
CDK4-212ENST00000552388 PNMA2Q9UL42 364 aa15.26■□□□□ 0.03
CDK4-212ENST00000552388 RIPK3Q9Y572 518 aa15.26■□□□□ 0.03
CDK4-212ENST00000552388 CYTH3O43739 400 aa15.25■□□□□ 0.03
CDK4-212ENST00000552388 STRNO43815 780 aa15.25■□□□□ 0.03
CDK4-212ENST00000552388 EN2P19622 333 aaPredicted RBP15.25■□□□□ 0.03
CDK4-212ENST00000552388 PTPREP23469 700 aa15.25■□□□□ 0.03
CDK4-212ENST00000552388 FXR1P51114 621 aaKnown RBP eCLIP15.25■□□□□ 0.03
CDK4-212ENST00000552388 PRKCZQ05513 592 aa15.25■□□□□ 0.03
CDK4-212ENST00000552388 PPP2R5BQ15173 497 aa15.25■□□□□ 0.03
CDK4-212ENST00000552388 CDC37Q16543 378 aaPredicted RBP15.25■□□□□ 0.03
CDK4-212ENST00000552388 TKFCQ3LXA3 575 aa15.25■□□□□ 0.03
CDK4-212ENST00000552388 MORN1Q5T089 497 aa15.25■□□□□ 0.03
CDK4-212ENST00000552388 CCDC174Q6PII3 467 aa15.25■□□□□ 0.03
CDK4-212ENST00000552388 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.25■□□□□ 0.03
CDK4-212ENST00000552388 NBPF11Q86T75 865 aa15.25■□□□□ 0.03
CDK4-212ENST00000552388 RAB11FIP4Q86YS3 637 aa15.25■□□□□ 0.03
CDK4-212ENST00000552388 CCDC144CPQ8IYA2 1237 aa15.25■□□□□ 0.03
CDK4-212ENST00000552388 CHST13Q8NET6 341 aa15.25■□□□□ 0.03
CDK4-212ENST00000552388 AGBL1Q96MI9 1066 aa15.25■□□□□ 0.03
CDK4-212ENST00000552388 SPZ1Q9BXG8 430 aa15.25■□□□□ 0.03
CDK4-212ENST00000552388 GABRQQ9UN88 632 aa15.25■□□□□ 0.03
CDK4-212ENST00000552388 SLC15A5A6NIM6 579 aa15.24■□□□□ 0.03
CDK4-212ENST00000552388 DHX16O60231 1041 aaKnown RBP15.24■□□□□ 0.03
CDK4-212ENST00000552388 FLT3LGP49771 235 aa15.24■□□□□ 0.03
CDK4-212ENST00000552388 GRB14Q14449 540 aa15.24■□□□□ 0.03
CDK4-212ENST00000552388 RTN1Q16799 776 aa15.24■□□□□ 0.03
CDK4-212ENST00000552388 WDR78Q5VTH9 848 aa15.24■□□□□ 0.03
CDK4-212ENST00000552388 TMTC3Q6ZXV5 915 aa15.24■□□□□ 0.03
CDK4-212ENST00000552388 ABRAQ8N0Z2 381 aa15.24■□□□□ 0.03
CDK4-212ENST00000552388 SOCS4Q8WXH5 440 aa15.24■□□□□ 0.03
CDK4-212ENST00000552388 USP6NLQ92738 828 aa15.24■□□□□ 0.03
CDK4-212ENST00000552388 TBC1D32Q96NH3 1257 aa15.24■□□□□ 0.03
CDK4-212ENST00000552388 NUDT12Q9BQG2 462 aa15.24■□□□□ 0.03
CDK4-212ENST00000552388 CWC22Q9HCG8 908 aaKnown RBP15.24■□□□□ 0.03
CDK4-212ENST00000552388 VAT1LQ9HCJ6 419 aa15.24■□□□□ 0.03
CDK4-212ENST00000552388 CCPG1Q9ULG6 757 aa15.24■□□□□ 0.03
CDK4-212ENST00000552388 PTCH2Q9Y6C5 1203 aa15.24■□□□□ 0.03
CDK4-212ENST00000552388 IVNS1ABPQ9Y6Y0 642 aa15.24■□□□□ 0.03
CDK4-212ENST00000552388 SZT2Q5T011 3432 aa15.24■□□□□ 0.03
CDK4-212ENST00000552388 RANBP2P49792 3224 aaKnown RBP15.23■□□□□ 0.03
CDK4-212ENST00000552388 GOLGA8AA7E2F4 631 aa15.23■□□□□ 0.03
CDK4-212ENST00000552388 GOLGA8BA8MQT2 603 aa15.23■□□□□ 0.03
CDK4-212ENST00000552388 PLEKHA8P1O95397 391 aa15.23■□□□□ 0.03
CDK4-212ENST00000552388 FCER1AP12319 257 aa15.23■□□□□ 0.03
CDK4-212ENST00000552388 PDIA3P30101 505 aaKnown RBP15.23■□□□□ 0.03
CDK4-212ENST00000552388 METAP2P50579 478 aaKnown RBP eCLIP15.23■□□□□ 0.033e-6■■■■□ 25.7
CDK4-212ENST00000552388 NEK4P51957 841 aa15.23■□□□□ 0.03
CDK4-212ENST00000552388 IRF5Q13568 498 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms