RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 EAPPQ56P03 285 aaPredicted RBP6.55□□□□□ -1.36
USP44-207ENST00000552237 LIPIQ6XZB0 460 aa6.55□□□□□ -1.36
USP44-207ENST00000552237 GOLM1Q8NBJ4 401 aa6.55□□□□□ -1.36
USP44-207ENST00000552237 PMF1-BGLAPU3KQ54 211 aa6.55□□□□□ -1.36
USP44-207ENST00000552237 A0A1B0GTL3 188 aa6.54□□□□□ -1.36
USP44-207ENST00000552237 AKAP8O43823 692 aaKnown RBP6.54□□□□□ -1.36
USP44-207ENST00000552237 CLEC3AO75596 197 aa6.54□□□□□ -1.36
USP44-207ENST00000552237 IGFBP6P24592 240 aaPredicted RBP6.54□□□□□ -1.36
USP44-207ENST00000552237 KCNA1Q09470 495 aa6.54□□□□□ -1.36
USP44-207ENST00000552237 PWP1Q13610 501 aa6.54□□□□□ -1.36
USP44-207ENST00000552237 ZNF512BQ96KM6 892 aaPredicted RBP6.54□□□□□ -1.36
USP44-207ENST00000552237 RHOVQ96L33 236 aa6.54□□□□□ -1.36
USP44-207ENST00000552237 TMEM74Q96NL1 305 aa6.54□□□□□ -1.36
USP44-207ENST00000552237 JMJD8Q96S16 334 aa6.54□□□□□ -1.36
USP44-207ENST00000552237 MKRN2Q9H000 416 aaKnown RBP6.54□□□□□ -1.36
USP44-207ENST00000552237 GMIPQ9P107 970 aa6.54□□□□□ -1.36
USP44-207ENST00000552237 FBXL21Q9UKT6 434 aa6.54□□□□□ -1.36
USP44-207ENST00000552237 IRS2Q9Y4H2 1338 aa6.53□□□□□ -1.36
USP44-207ENST00000552237 ZNF205O95201 554 aa6.53□□□□□ -1.36
USP44-207ENST00000552237 POLR2BP30876 1174 aaKnown RBP6.53□□□□□ -1.36
USP44-207ENST00000552237 BMP8BP34820 402 aa6.53□□□□□ -1.36
USP44-207ENST00000552237 FOXO4P98177 505 aa6.53□□□□□ -1.36
USP44-207ENST00000552237 CWF19L2Q2TBE0 894 aaKnown RBP6.53□□□□□ -1.36
USP44-207ENST00000552237 JAMLQ86YT9 394 aa6.53□□□□□ -1.36
USP44-207ENST00000552237 AP5S1Q9NUS5 200 aa6.53□□□□□ -1.36
USP44-207ENST00000552237 GFOD1Q9NXC2 390 aa6.53□□□□□ -1.36
USP44-207ENST00000552237 SMPD4Q9NXE4 827 aa6.53□□□□□ -1.36
USP44-207ENST00000552237 DBR1Q9UK59 544 aaKnown RBP6.53□□□□□ -1.36
USP44-207ENST00000552237 PCDHB12Q9Y5F1 795 aa6.53□□□□□ -1.36
USP44-207ENST00000552237 TLR3O15455 904 aaKnown RBP6.52□□□□□ -1.37
USP44-207ENST00000552237 TNFRSF1AP19438 455 aa6.52□□□□□ -1.37
USP44-207ENST00000552237 CNR2P34972 360 aa6.52□□□□□ -1.37
USP44-207ENST00000552237 GJA9P57773 515 aa6.52□□□□□ -1.37
USP44-207ENST00000552237 XPCQ01831 940 aaPredicted RBP6.52□□□□□ -1.37
USP44-207ENST00000552237 VWA3BQ502W6 1294 aa6.52□□□□□ -1.37
USP44-207ENST00000552237 PAQR3Q6TCH7 311 aa6.52□□□□□ -1.37
USP44-207ENST00000552237 HOMEZQ8IX15 550 aa6.52□□□□□ -1.37
USP44-207ENST00000552237 FBXO27Q8NI29 283 aa6.52□□□□□ -1.37
USP44-207ENST00000552237 FNIP1Q8TF40 1166 aa6.52□□□□□ -1.37
USP44-207ENST00000552237 DDX1Q92499 740 aaKnown RBP6.52□□□□□ -1.37
USP44-207ENST00000552237 PARP2Q9UGN5 583 aa6.52□□□□□ -1.37
USP44-207ENST00000552237 PCDHB14Q9Y5E9 798 aa6.52□□□□□ -1.37
USP44-207ENST00000552237 MINDY4BA8MYZ0 360 aa6.51□□□□□ -1.37
USP44-207ENST00000552237 PLA2G1BP04054 148 aaKnown RBP6.51□□□□□ -1.37
USP44-207ENST00000552237 CYBBP04839 570 aa6.51□□□□□ -1.37
USP44-207ENST00000552237 ADAM17P78536 824 aa6.51□□□□□ -1.37
USP44-207ENST00000552237 BICRALQ6AI39 1079 aa6.51□□□□□ -1.37
USP44-207ENST00000552237 OVOS1Q6IE37 1185 aa6.51□□□□□ -1.37
USP44-207ENST00000552237 CRTC3Q6UUV7 619 aa6.51□□□□□ -1.37
USP44-207ENST00000552237 CRELD1Q96HD1 420 aa6.51□□□□□ -1.37
USP44-207ENST00000552237 DSCC1Q9BVC3 393 aa6.51□□□□□ -1.37
USP44-207ENST00000552237 USP31Q70CQ4 1352 aa6.51□□□□□ -1.37
USP44-207ENST00000552237 PATL2C9JE40 543 aaKnown RBP6.5□□□□□ -1.37
USP44-207ENST00000552237 FSHBP01225 129 aa6.5□□□□□ -1.37
USP44-207ENST00000552237 VAV1P15498 845 aa6.5□□□□□ -1.37
USP44-207ENST00000552237 SAPCD2Q86UD0 394 aa6.5□□□□□ -1.37
USP44-207ENST00000552237 MATN3O15232 486 aa6.49□□□□□ -1.37
USP44-207ENST00000552237 DBHP09172 617 aa6.49□□□□□ -1.37
USP44-207ENST00000552237 CTSKP43235 329 aa6.49□□□□□ -1.37
USP44-207ENST00000552237 DAB2P98082 770 aa6.49□□□□□ -1.37
USP44-207ENST00000552237 MVKQ03426 396 aa6.49□□□□□ -1.37
USP44-207ENST00000552237 HLA-DQA1Q5Y7H0 255 aa6.49□□□□□ -1.37
USP44-207ENST00000552237 FAM196AQ6ZSG2 479 aa6.49□□□□□ -1.37
USP44-207ENST00000552237 ZNF526Q8TF50 670 aaPredicted RBP6.49□□□□□ -1.37
USP44-207ENST00000552237 RSRP1Q9BUV0 290 aa6.49□□□□□ -1.37
USP44-207ENST00000552237 KRTAP9-8Q9BYQ0 159 aa6.49□□□□□ -1.37
USP44-207ENST00000552237 RNF38Q9H0F5 515 aa6.49□□□□□ -1.37
USP44-207ENST00000552237 ANTXR1Q9H6X2 564 aa6.49□□□□□ -1.37
USP44-207ENST00000552237 SH3D21A4FU49 640 aa6.48□□□□□ -1.37
USP44-207ENST00000552237 SRGAP3O43295 1099 aa6.48□□□□□ -1.37
USP44-207ENST00000552237 GSTM1P09488 218 aa6.48□□□□□ -1.37
USP44-207ENST00000552237 CTSHP09668 335 aa6.48□□□□□ -1.37
USP44-207ENST00000552237 CCNFP41002 786 aa6.48□□□□□ -1.37
USP44-207ENST00000552237 CWF19L1Q69YN2 538 aaKnown RBP6.48□□□□□ -1.37
USP44-207ENST00000552237 SLC16A11Q8NCK7 471 aa6.48□□□□□ -1.37
USP44-207ENST00000552237 BRMS1Q9HCU9 246 aa6.48□□□□□ -1.37
USP44-207ENST00000552237 HCFC2Q9Y5Z7 792 aa6.48□□□□□ -1.37
USP44-207ENST00000552237 DUSP10Q9Y6W6 482 aa6.48□□□□□ -1.37
USP44-207ENST00000552237 F8W031 263 aaPredicted RBP6.47□□□□□ -1.37
USP44-207ENST00000552237 ITGB3P05106 788 aa6.47□□□□□ -1.37
USP44-207ENST00000552237 GSNP06396 782 aa6.47□□□□□ -1.37
USP44-207ENST00000552237 NCAM1P13591 858 aa6.47□□□□□ -1.37
USP44-207ENST00000552237 ATF2P15336 505 aa6.47□□□□□ -1.37
USP44-207ENST00000552237 CDCP2Q5VXM1 449 aa6.47□□□□□ -1.37
USP44-207ENST00000552237 CPZQ66K79 652 aa6.47□□□□□ -1.37
USP44-207ENST00000552237 NLRC3Q7RTR2 1065 aa6.47□□□□□ -1.37
USP44-207ENST00000552237 USP48Q86UV5 1035 aa6.47□□□□□ -1.37
USP44-207ENST00000552237 CARFQ8N187 725 aa6.47□□□□□ -1.37
USP44-207ENST00000552237 ALG3Q92685 438 aa6.47□□□□□ -1.37
USP44-207ENST00000552237 LOXL4Q96JB6 756 aa6.47□□□□□ -1.37
USP44-207ENST00000552237 LNPKQ9C0E8 428 aa6.47□□□□□ -1.37
USP44-207ENST00000552237 CNNM2Q9H8M5 875 aa6.47□□□□□ -1.37
USP44-207ENST00000552237 ANKRD33BA6NCL7 494 aa6.46□□□□□ -1.38
USP44-207ENST00000552237 MC3RP41968 323 aa6.46□□□□□ -1.38
USP44-207ENST00000552237 HTRA3P83110 453 aa6.46□□□□□ -1.38
USP44-207ENST00000552237 PRR5P85299 388 aa6.46□□□□□ -1.38
USP44-207ENST00000552237 CYP2R1Q6VVX0 501 aa6.46□□□□□ -1.38
USP44-207ENST00000552237 TMEM52Q8NDY8 209 aa6.46□□□□□ -1.38
USP44-207ENST00000552237 RGS22Q8NE09 1264 aa6.46□□□□□ -1.38
USP44-207ENST00000552237 ATG4CQ96DT6 458 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms