RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 SLC9C2Q5TAH2 1124 aa12.35□□□□□ -0.43
BEST3-210ENST00000551160 TMED8Q6PL24 325 aaPredicted RBP12.35□□□□□ -0.43
BEST3-210ENST00000551160 ARMCX2Q7L311 632 aa12.35□□□□□ -0.43
BEST3-210ENST00000551160 ZNF467Q7Z7K2 595 aaPredicted RBP12.35□□□□□ -0.43
BEST3-210ENST00000551160 SCLYQ96I15 445 aa12.35□□□□□ -0.43
BEST3-210ENST00000551160 SLF1Q9BQI6 1058 aa12.35□□□□□ -0.43
BEST3-210ENST00000551160 KATNBL1Q9H079 304 aa12.35□□□□□ -0.43
BEST3-210ENST00000551160 CD320Q9NPF0 282 aa12.35□□□□□ -0.43
BEST3-210ENST00000551160 ZNF532Q9HCE3 1301 aa12.35□□□□□ -0.43
BEST3-210ENST00000551160 B4GALT4O60513 344 aa12.34□□□□□ -0.43
BEST3-210ENST00000551160 POU3F3P20264 500 aaPredicted RBP12.34□□□□□ -0.43
BEST3-210ENST00000551160 CDK8P49336 464 aa12.34□□□□□ -0.43
BEST3-210ENST00000551160 ATP8B2P98198 1209 aa12.34□□□□□ -0.43
BEST3-210ENST00000551160 ITGA7Q13683 1181 aa12.34□□□□□ -0.43
BEST3-210ENST00000551160 SLFNL1Q499Z3 407 aa12.34□□□□□ -0.43
BEST3-210ENST00000551160 TMEM67Q5HYA8 995 aa12.34□□□□□ -0.43
BEST3-210ENST00000551160 CCDC144CPQ8IYA2 1237 aa12.34□□□□□ -0.43
BEST3-210ENST00000551160 ARNTL2Q8WYA1 636 aa12.34□□□□□ -0.43
BEST3-210ENST00000551160 ABHD16BQ9H3Z7 469 aa12.34□□□□□ -0.43
BEST3-210ENST00000551160 ARMT1Q9H993 441 aa12.34□□□□□ -0.43
BEST3-210ENST00000551160 GOPCQ9HD26 462 aa12.34□□□□□ -0.43
BEST3-210ENST00000551160 COG5Q9UP83 839 aa12.34□□□□□ -0.43
BEST3-210ENST00000551160 NOP58Q9Y2X3 529 aaKnown RBP12.34□□□□□ -0.43
BEST3-210ENST00000551160 NAV1Q8NEY1 1877 aa12.34□□□□□ -0.43
BEST3-210ENST00000551160 TCRBV5S4A2TA0A5A2 114 aa12.33□□□□□ -0.44
BEST3-210ENST00000551160 PSMC6P62333 389 aa12.33□□□□□ -0.44
BEST3-210ENST00000551160 NKX3-2P78367 333 aa12.33□□□□□ -0.44
BEST3-210ENST00000551160 NOL8Q76FK4 1167 aaKnown RBP12.33□□□□□ -0.44
BEST3-210ENST00000551160 SPRED2Q7Z698 418 aa12.33□□□□□ -0.44
BEST3-210ENST00000551160 AACSQ86V21 672 aa12.33□□□□□ -0.44
BEST3-210ENST00000551160 CPXCR1Q8N123 301 aa12.33□□□□□ -0.44
BEST3-210ENST00000551160 FRAT1Q92837 279 aaPredicted RBP12.33□□□□□ -0.44
BEST3-210ENST00000551160 HLA-CQ95604 372 aa12.33□□□□□ -0.44
BEST3-210ENST00000551160 CCDC17Q96LX7 622 aa12.33□□□□□ -0.44
BEST3-210ENST00000551160 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.33□□□□□ -0.44
BEST3-210ENST00000551160 KANSL2Q9H9L4 492 aa12.33□□□□□ -0.44
BEST3-210ENST00000551160 REV3LO60673 3130 aa12.33□□□□□ -0.44
BEST3-210ENST00000551160 PI4K2BG5E9Z4 385 aa12.32□□□□□ -0.44
BEST3-210ENST00000551160 TAP1Q03518 808 aa12.32□□□□□ -0.44
BEST3-210ENST00000551160 FSCN1Q16658 493 aaKnown RBP12.32□□□□□ -0.44
BEST3-210ENST00000551160 C16orf86Q6ZW13 317 aa12.32□□□□□ -0.44
BEST3-210ENST00000551160 TLK2Q86UE8 772 aa12.32□□□□□ -0.44
BEST3-210ENST00000551160 RPUSD2Q8IZ73 545 aaKnown RBP12.32□□□□□ -0.44
BEST3-210ENST00000551160 TMEM57Q8N5G2 664 aa12.32□□□□□ -0.44
BEST3-210ENST00000551160 AGBL1Q96MI9 1066 aa12.32□□□□□ -0.44
BEST3-210ENST00000551160 RAVER2Q9HCJ3 691 aaKnown RBP12.32□□□□□ -0.44
BEST3-210ENST00000551160 GNEQ9Y223 722 aaKnown RBP12.32□□□□□ -0.44
BEST3-210ENST00000551160 DDX49Q9Y6V7 483 aaKnown RBP12.32□□□□□ -0.44
BEST3-210ENST00000551160 LRRC37A2A6NM11 1700 aa12.31□□□□□ -0.44
BEST3-210ENST00000551160 ATP2A1O14983 1001 aa12.31□□□□□ -0.44
BEST3-210ENST00000551160 CABYRO75952 493 aa12.31□□□□□ -0.44
BEST3-210ENST00000551160 MBD4O95243 580 aa12.31□□□□□ -0.44
BEST3-210ENST00000551160 NDUFB10O96000 172 aa12.31□□□□□ -0.44
BEST3-210ENST00000551160 MRE11P49959 708 aa12.31□□□□□ -0.44
BEST3-210ENST00000551160 CNTN2Q02246 1040 aa12.31□□□□□ -0.44
BEST3-210ENST00000551160 TNFAIP2Q03169 654 aa12.31□□□□□ -0.44
BEST3-210ENST00000551160 GRB10Q13322 594 aa12.31□□□□□ -0.44
BEST3-210ENST00000551160 C12orf60Q5U649 245 aa12.31□□□□□ -0.44
BEST3-210ENST00000551160 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.31□□□□□ -0.44
BEST3-210ENST00000551160 DEFB128Q7Z7B8 93 aa12.31□□□□□ -0.44
BEST3-210ENST00000551160 ANKRD35Q8N283 1001 aa12.31□□□□□ -0.44
BEST3-210ENST00000551160 TRMT13Q9NUP7 481 aaKnown RBP12.31□□□□□ -0.44
BEST3-210ENST00000551160 PARP14Q460N5 1801 aa12.31□□□□□ -0.44
BEST3-210ENST00000551160 COL11A1P12107 1806 aaPredicted RBP12.3□□□□□ -0.44
BEST3-210ENST00000551160 USP17L12C9JPN9 530 aa12.3□□□□□ -0.44
BEST3-210ENST00000551160 USP17L21D6R901 530 aa12.3□□□□□ -0.44
BEST3-210ENST00000551160 GOLIM4O00461 696 aa12.3□□□□□ -0.44
BEST3-210ENST00000551160 IPO8O15397 1037 aaKnown RBP12.3□□□□□ -0.44
BEST3-210ENST00000551160 LPXNO60711 386 aa12.3□□□□□ -0.44
BEST3-210ENST00000551160 CHGBP05060 677 aa12.3□□□□□ -0.44
BEST3-210ENST00000551160 CYP2C9P11712 490 aa12.3□□□□□ -0.44
BEST3-210ENST00000551160 SMPD1P17405 629 aa12.3□□□□□ -0.44
BEST3-210ENST00000551160 TTF1Q15361 905 aaPredicted RBP12.3□□□□□ -0.44
BEST3-210ENST00000551160 TMEM63BQ5T3F8 832 aa12.3□□□□□ -0.44
BEST3-210ENST00000551160 DNAJC2Q99543 621 aaKnown RBP12.3□□□□□ -0.44
BEST3-210ENST00000551160 ALDH8A1Q9H2A2 487 aaPredicted RBP12.3□□□□□ -0.44
BEST3-210ENST00000551160 HOMER2Q9NSB8 354 aa12.3□□□□□ -0.44
BEST3-210ENST00000551160 GBF1Q92538 1859 aa12.29□□□□□ -0.44
BEST3-210ENST00000551160 ZNFX1Q9P2E3 1918 aaKnown RBP12.29□□□□□ -0.44
BEST3-210ENST00000551160 DYNC1LI2O43237 492 aaPredicted RBP12.29□□□□□ -0.44
BEST3-210ENST00000551160 ZBED4O75132 1171 aa12.29□□□□□ -0.44
BEST3-210ENST00000551160 PFKMP08237 780 aa12.29□□□□□ -0.44
BEST3-210ENST00000551160 KIFC2Q96AC6 838 aa12.29□□□□□ -0.44
BEST3-210ENST00000551160 SLC9A7Q96T83 725 aa12.29□□□□□ -0.44
BEST3-210ENST00000551160 SLC38A10Q9HBR0 1119 aa12.29□□□□□ -0.44
BEST3-210ENST00000551160 IL1RAPL2Q9NP60 686 aa12.29□□□□□ -0.44
BEST3-210ENST00000551160 ATP8A2Q9NTI2 1148 aa12.29□□□□□ -0.44
BEST3-210ENST00000551160 EXOC6BQ9Y2D4 811 aa12.29□□□□□ -0.44
BEST3-210ENST00000551160 BRWD1Q9NSI6 2320 aa12.29□□□□□ -0.44
BEST3-210ENST00000551160 SOWAHBA6NEL2 793 aa12.28□□□□□ -0.44
BEST3-210ENST00000551160 PRR33A8MZF0 331 aa12.28□□□□□ -0.44
BEST3-210ENST00000551160 F5H6K3 240 aa12.28□□□□□ -0.44
BEST3-210ENST00000551160 ZEB2O60315 1214 aa12.28□□□□□ -0.44
BEST3-210ENST00000551160 KLRC3Q07444 240 aa12.28□□□□□ -0.44
BEST3-210ENST00000551160 HERC6Q8IVU3 1022 aa12.28□□□□□ -0.44
BEST3-210ENST00000551160 FBXO16Q8IX29 292 aaPredicted RBP12.28□□□□□ -0.44
BEST3-210ENST00000551160 FAM133AQ8N9E0 248 aa12.28□□□□□ -0.44
BEST3-210ENST00000551160 PRPF38AQ8NAV1 312 aaKnown RBP12.28□□□□□ -0.44
BEST3-210ENST00000551160 CHST13Q8NET6 341 aa12.28□□□□□ -0.44
BEST3-210ENST00000551160 GDPD5Q8WTR4 605 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms