RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 USP54Q70EL1 1684 aa7.15□□□□□ -1.27
SCAF11-214ENST00000550893 GNAT3A8MTJ3 354 aa7.14□□□□□ -1.27
SCAF11-214ENST00000550893 PIK3C2AO00443 1686 aa7.14□□□□□ -1.27
SCAF11-214ENST00000550893 BPNT1O95861 308 aa7.14□□□□□ -1.27
SCAF11-214ENST00000550893 ZNF16P17020 682 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-214ENST00000550893 GARTP22102 1010 aa7.14□□□□□ -1.27
SCAF11-214ENST00000550893 MFAP1P55081 439 aaKnown RBP7.14□□□□□ -1.27
SCAF11-214ENST00000550893 PLCL1Q15111 1095 aa7.14□□□□□ -1.27
SCAF11-214ENST00000550893 DIEXFQ68CQ4 756 aaKnown RBP7.14□□□□□ -1.27
SCAF11-214ENST00000550893 SLC6A19Q695T7 634 aa7.14□□□□□ -1.27
SCAF11-214ENST00000550893 ERMP1Q7Z2K6 904 aa7.14□□□□□ -1.27
SCAF11-214ENST00000550893 MON2Q7Z3U7 1717 aa7.14□□□□□ -1.27
SCAF11-214ENST00000550893 MCATQ8IVS2 390 aaKnown RBP7.14□□□□□ -1.27
SCAF11-214ENST00000550893 GOLM1Q8NBJ4 401 aa7.14□□□□□ -1.27
SCAF11-214ENST00000550893 ADAM30Q9UKF2 790 aa7.14□□□□□ -1.27
SCAF11-214ENST00000550893 NWD2Q9ULI1 1742 aa7.14□□□□□ -1.27
SCAF11-214ENST00000550893 LMO7Q8WWI1 1683 aa7.13□□□□□ -1.27
SCAF11-214ENST00000550893 PLCG1P19174 1290 aa7.13□□□□□ -1.27
SCAF11-214ENST00000550893 FUT4P22083 530 aa7.13□□□□□ -1.27
SCAF11-214ENST00000550893 SNAP47Q5SQN1 464 aa7.13□□□□□ -1.27
SCAF11-214ENST00000550893 SFRP5Q5T4F7 317 aa7.13□□□□□ -1.27
SCAF11-214ENST00000550893 CDH24Q86UP0 819 aa7.13□□□□□ -1.27
SCAF11-214ENST00000550893 WNK3Q9BYP7 1800 aa7.13□□□□□ -1.27
SCAF11-214ENST00000550893 ANKARQ7Z5J8 1434 aa7.12□□□□□ -1.27
SCAF11-214ENST00000550893 UPK3BL1B0FP48 263 aa7.12□□□□□ -1.27
SCAF11-214ENST00000550893 UPK3BL2E5RIL1 263 aa7.12□□□□□ -1.27
SCAF11-214ENST00000550893 ZNF865P0CJ78 1059 aaPredicted RBP7.12□□□□□ -1.27
SCAF11-214ENST00000550893 ZNF792Q3KQV3 632 aa7.12□□□□□ -1.27
SCAF11-214ENST00000550893 C22orf34Q6ZV56 151 aa7.12□□□□□ -1.27
SCAF11-214ENST00000550893 FBXO27Q8NI29 283 aa7.12□□□□□ -1.27
SCAF11-214ENST00000550893 COL18A1P39060 1754 aa7.12□□□□□ -1.27
SCAF11-214ENST00000550893 MYOM1P52179 1685 aa7.12□□□□□ -1.27
SCAF11-214ENST00000550893 SRCAPQ6ZRS2 3230 aa7.12□□□□□ -1.27
SCAF11-214ENST00000550893 RGS12O14924 1447 aa7.11□□□□□ -1.27
SCAF11-214ENST00000550893 GPRASP1Q5JY77 1395 aa7.11□□□□□ -1.27
SCAF11-214ENST00000550893 GRIN3BO60391 1043 aa7.11□□□□□ -1.27
SCAF11-214ENST00000550893 CLCN7P51798 805 aa7.11□□□□□ -1.27
SCAF11-214ENST00000550893 LDLRAD1Q5T700 205 aa7.11□□□□□ -1.27
SCAF11-214ENST00000550893 ZNF746Q6NUN9 644 aaPredicted RBP7.11□□□□□ -1.27
SCAF11-214ENST00000550893 FBXL19Q6PCT2 694 aa7.11□□□□□ -1.27
SCAF11-214ENST00000550893 MFSD4AQ8N468 514 aa7.11□□□□□ -1.27
SCAF11-214ENST00000550893 ASB11Q8WXH4 323 aa7.11□□□□□ -1.27
SCAF11-214ENST00000550893 BCL11AQ9H165 835 aa7.11□□□□□ -1.27
SCAF11-214ENST00000550893 ADAMTS6Q9UKP5 1117 aa7.11□□□□□ -1.27
SCAF11-214ENST00000550893 POLR3KQ9Y2Y1 108 aaPredicted RBP7.11□□□□□ -1.27
SCAF11-214ENST00000550893 CAPN6Q9Y6Q1 641 aa7.11□□□□□ -1.27
SCAF11-214ENST00000550893 SLIT2O94813 1529 aa7.11□□□□□ -1.27
SCAF11-214ENST00000550893 BCL9LQ86UU0 1499 aa7.11□□□□□ -1.27
SCAF11-214ENST00000550893 RALGAPBQ86X10 1494 aa7.11□□□□□ -1.27
SCAF11-214ENST00000550893 TNS3Q68CZ2 1445 aa7.1□□□□□ -1.27
SCAF11-214ENST00000550893 THSD7AQ9UPZ6 1657 aa7.1□□□□□ -1.27
SCAF11-214ENST00000550893 PITPNM2Q9BZ72 1349 aa7.1□□□□□ -1.27
SCAF11-214ENST00000550893 FAM155AB1AL88 458 aaPredicted RBP7.1□□□□□ -1.27
SCAF11-214ENST00000550893 CBX7O95931 251 aa7.1□□□□□ -1.27
SCAF11-214ENST00000550893 RNASE1P07998 156 aaKnown RBP7.1□□□□□ -1.27
SCAF11-214ENST00000550893 MPP2Q14168 576 aa7.1□□□□□ -1.27
SCAF11-214ENST00000550893 TMEM201Q5SNT2 666 aa7.1□□□□□ -1.27
SCAF11-214ENST00000550893 ANGEL2Q5VTE6 544 aaKnown RBP7.1□□□□□ -1.27
SCAF11-214ENST00000550893 CDKAL1Q5VV42 579 aa7.1□□□□□ -1.27
SCAF11-214ENST00000550893 FAM196AQ6ZSG2 479 aa7.1□□□□□ -1.27
SCAF11-214ENST00000550893 FAM13CQ8NE31 585 aa7.1□□□□□ -1.27
SCAF11-214ENST00000550893 PI4K2BQ8TCG2 481 aa7.1□□□□□ -1.27
SCAF11-214ENST00000550893 HSPA12BQ96MM6 686 aa7.1□□□□□ -1.27
SCAF11-214ENST00000550893 MBNL3Q9NUK0 354 aaKnown RBP7.1□□□□□ -1.27
SCAF11-214ENST00000550893 STK26Q9P289 416 aa7.1□□□□□ -1.27
SCAF11-214ENST00000550893 GGT7Q9UJ14 662 aa7.1□□□□□ -1.27
SCAF11-214ENST00000550893 CDK12Q9NYV4 1490 aaPredicted RBP7.1□□□□□ -1.27
SCAF11-214ENST00000550893 SPATA31A6Q5VVP1 1343 aa7.09□□□□□ -1.27
SCAF11-214ENST00000550893 TLR3O15455 904 aaKnown RBP7.09□□□□□ -1.27
SCAF11-214ENST00000550893 ITGB5P18084 799 aa7.09□□□□□ -1.27
SCAF11-214ENST00000550893 ATF3P18847 181 aa7.09□□□□□ -1.27
SCAF11-214ENST00000550893 CYP7A1P22680 504 aa7.09□□□□□ -1.27
SCAF11-214ENST00000550893 EIF4A3P38919 411 aaKnown RBP7.09□□□□□ -1.27
SCAF11-214ENST00000550893 IKZF1Q13422 519 aa7.09□□□□□ -1.27
SCAF11-214ENST00000550893 HS2ST1Q7LGA3 356 aa7.09□□□□□ -1.27
SCAF11-214ENST00000550893 REC114Q7Z4M0 266 aa7.09□□□□□ -1.27
SCAF11-214ENST00000550893 TMEM87AQ8NBN3 555 aa7.09□□□□□ -1.27
SCAF11-214ENST00000550893 DNAJB8Q8NHS0 232 aa7.09□□□□□ -1.27
SCAF11-214ENST00000550893 PRAM1Q96QH2 718 aa7.09□□□□□ -1.27
SCAF11-214ENST00000550893 SIN3AQ96ST3 1273 aa7.09□□□□□ -1.27
SCAF11-214ENST00000550893 KCNQ5Q9NR82 932 aa7.09□□□□□ -1.27
SCAF11-214ENST00000550893 SEMA3GQ9NS98 782 aa7.09□□□□□ -1.27
SCAF11-214ENST00000550893 REV1Q9UBZ9 1251 aa7.09□□□□□ -1.27
SCAF11-214ENST00000550893 ST14Q9Y5Y6 855 aa7.09□□□□□ -1.27
SCAF11-214ENST00000550893 RGPD5Q99666 1765 aa7.09□□□□□ -1.27
SCAF11-214ENST00000550893 ARID1BQ8NFD5 2236 aaPredicted RBP7.09□□□□□ -1.27
SCAF11-214ENST00000550893 CD163L1Q9NR16 1453 aa7.09□□□□□ -1.27
SCAF11-214ENST00000550893 ATRNO75882 1429 aa7.09□□□□□ -1.28
SCAF11-214ENST00000550893 SSH2Q76I76 1423 aa7.09□□□□□ -1.28
SCAF11-214ENST00000550893 COL14A1Q05707 1796 aaKnown RBP7.08□□□□□ -1.28
SCAF11-214ENST00000550893 GREM1O60565 184 aa7.08□□□□□ -1.28
SCAF11-214ENST00000550893 HTR3BO95264 441 aa7.08□□□□□ -1.28
SCAF11-214ENST00000550893 NBPF8Q3BBV2 869 aa7.08□□□□□ -1.28
SCAF11-214ENST00000550893 PPP1R13LQ8WUF5 828 aa7.08□□□□□ -1.28
SCAF11-214ENST00000550893 CYB5D2Q8WUJ1 264 aa7.08□□□□□ -1.28
SCAF11-214ENST00000550893 RC3H2Q9HBD1 1191 aaKnown RBP7.08□□□□□ -1.28
SCAF11-214ENST00000550893 PRDM7Q9NQW5 492 aa7.08□□□□□ -1.28
SCAF11-214ENST00000550893 CEP131Q9UPN4 1083 aa7.08□□□□□ -1.28
SCAF11-214ENST00000550893 SUPT16HQ9Y5B9 1047 aaKnown RBP7.08□□□□□ -1.28
SCAF11-214ENST00000550893 TNS1Q9HBL0 1735 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms