RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 SH2B1Q9NRF2 756 aaPredicted RBP15.69■□□□□ 0.1
ERBB3-215ENST00000550828 BTBD7Q9P203 1132 aa15.69■□□□□ 0.1
ERBB3-215ENST00000550828 K7ELQ4 463 aaPredicted RBP15.68■□□□□ 0.1
ERBB3-215ENST00000550828 IFNAR1P17181 557 aa15.68■□□□□ 0.1
ERBB3-215ENST00000550828 OSBPP22059 807 aa15.68■□□□□ 0.1
ERBB3-215ENST00000550828 GNAQP50148 359 aa15.68■□□□□ 0.1
ERBB3-215ENST00000550828 PABPC4Q13310 644 aaKnown RBP eCLIP15.68■□□□□ 0.1
ERBB3-215ENST00000550828 CRHR2Q13324 411 aa15.68■□□□□ 0.1
ERBB3-215ENST00000550828 TAF1CQ15572 869 aaPredicted RBP15.68■□□□□ 0.1
ERBB3-215ENST00000550828 PRPF38AQ8NAV1 312 aaKnown RBP15.68■□□□□ 0.1
ERBB3-215ENST00000550828 PIBF1Q8WXW3 757 aa15.68■□□□□ 0.1
ERBB3-215ENST00000550828 SHISA4Q96DD7 197 aa15.68■□□□□ 0.1
ERBB3-215ENST00000550828 PIGSQ96S52 555 aa15.68■□□□□ 0.1
ERBB3-215ENST00000550828 SLC38A10Q9HBR0 1119 aa15.68■□□□□ 0.1
ERBB3-215ENST00000550828 VAT1LQ9HCJ6 419 aa15.68■□□□□ 0.1
ERBB3-215ENST00000550828 RBPJLQ9UBG7 517 aa15.68■□□□□ 0.1
ERBB3-215ENST00000550828 SMARCA1P28370 1054 aa15.67■□□□□ 0.1
ERBB3-215ENST00000550828 TMEM132BQ14DG7 1078 aa15.67■□□□□ 0.1
ERBB3-215ENST00000550828 PPP2R5BQ15173 497 aa15.67■□□□□ 0.1
ERBB3-215ENST00000550828 PKN1Q16512 942 aa15.67■□□□□ 0.1
ERBB3-215ENST00000550828 CDC37Q16543 378 aaPredicted RBP15.67■□□□□ 0.1
ERBB3-215ENST00000550828 QRICH1Q2TAL8 776 aa15.67■□□□□ 0.1
ERBB3-215ENST00000550828 PRPF38BQ5VTL8 546 aaKnown RBP15.67■□□□□ 0.1
ERBB3-215ENST00000550828 PARK7Q99497 189 aaKnown RBP15.67■□□□□ 0.1
ERBB3-215ENST00000550828 LZTS2Q9BRK4 669 aa15.67■□□□□ 0.1
ERBB3-215ENST00000550828 PNMA3Q9UL41 463 aa15.67■□□□□ 0.1
ERBB3-215ENST00000550828 ZNF214Q9UL59 606 aaPredicted RBP15.67■□□□□ 0.1
ERBB3-215ENST00000550828 RBM19Q9Y4C8 960 aaKnown RBP15.67■□□□□ 0.1
ERBB3-215ENST00000550828 PLXNA1Q9UIW2 1896 aa15.67■□□□□ 0.1
ERBB3-215ENST00000550828 CCDC196A0A1B0GTZ2 297 aa15.66■□□□□ 0.1
ERBB3-215ENST00000550828 PTPDC1A2A3K4 754 aa15.66■□□□□ 0.1
ERBB3-215ENST00000550828 FDPSP14324 419 aaKnown RBP15.66■□□□□ 0.1
ERBB3-215ENST00000550828 CCDC174Q6PII3 467 aa15.66■□□□□ 0.1
ERBB3-215ENST00000550828 HOMER1Q86YM7 354 aa15.66■□□□□ 0.1
ERBB3-215ENST00000550828 SMARCC2Q8TAQ2 1214 aa15.66■□□□□ 0.1
ERBB3-215ENST00000550828 AIFM3Q96NN9 605 aa15.66■□□□□ 0.1
ERBB3-215ENST00000550828 RAVER2Q9HCJ3 691 aaKnown RBP15.66■□□□□ 0.1
ERBB3-215ENST00000550828 RNF186Q9NXI6 227 aa15.66■□□□□ 0.1
ERBB3-215ENST00000550828 HOXC10Q9NYD6 342 aa15.66■□□□□ 0.1
ERBB3-215ENST00000550828 FMNL1O95466 1100 aaPredicted RBP15.65■□□□□ 0.1
ERBB3-215ENST00000550828 BCRP11274 1271 aa15.65■□□□□ 0.1
ERBB3-215ENST00000550828 Q3C1V9 767 aa15.65■□□□□ 0.1
ERBB3-215ENST00000550828 TYW1BQ6NUM6 668 aa15.65■□□□□ 0.1
ERBB3-215ENST00000550828 C17orf99Q6UX52 265 aa15.65■□□□□ 0.1
ERBB3-215ENST00000550828 HSCBQ8IWL3 235 aa15.65■□□□□ 0.1
ERBB3-215ENST00000550828 REM2Q8IYK8 340 aaPredicted RBP15.65■□□□□ 0.1
ERBB3-215ENST00000550828 AGBL1Q96MI9 1066 aa15.65■□□□□ 0.1
ERBB3-215ENST00000550828 PAGR1Q9BTK6 254 aa15.65■□□□□ 0.1
ERBB3-215ENST00000550828 SLC26A6Q9BXS9 759 aa15.65■□□□□ 0.1
ERBB3-215ENST00000550828 CPA4Q9UI42 421 aa15.65■□□□□ 0.1
ERBB3-215ENST00000550828 RIPK3Q9Y572 518 aa15.65■□□□□ 0.1
ERBB3-215ENST00000550828 V9GY48 417 aaPredicted RBP15.65■□□□□ 0.1
ERBB3-215ENST00000550828 STK36Q9NRP7 1315 aa15.65■□□□□ 0.1
ERBB3-215ENST00000550828 MCM3APO60318 1980 aa15.64■□□□□ 0.09
ERBB3-215ENST00000550828 CPLX1O14810 134 aa15.64■□□□□ 0.09
ERBB3-215ENST00000550828 PRPF3O43395 683 aaKnown RBP15.64■□□□□ 0.09
ERBB3-215ENST00000550828 DHX16O60231 1041 aaKnown RBP15.64■□□□□ 0.09
ERBB3-215ENST00000550828 TLR2O60603 784 aa15.64■□□□□ 0.09
ERBB3-215ENST00000550828 TBC1D8O95759 1140 aa15.64■□□□□ 0.09
ERBB3-215ENST00000550828 CAP1Q01518 475 aa15.64■□□□□ 0.09
ERBB3-215ENST00000550828 CPXCR1Q8N123 301 aa15.64■□□□□ 0.09
ERBB3-215ENST00000550828 ANKRD13CQ8N6S4 541 aa15.64■□□□□ 0.09
ERBB3-215ENST00000550828 SMCR8Q8TEV9 937 aaPredicted RBP15.64■□□□□ 0.09
ERBB3-215ENST00000550828 GPKOWQ92917 476 aaPredicted RBP eCLIP15.64■□□□□ 0.09
ERBB3-215ENST00000550828 DDX11Q96FC9 970 aa15.64■□□□□ 0.09
ERBB3-215ENST00000550828 CFHR5Q9BXR6 569 aa15.64■□□□□ 0.09
ERBB3-215ENST00000550828 RNF26Q9BY78 433 aaPredicted RBP15.64■□□□□ 0.09
ERBB3-215ENST00000550828 MORF4L1Q9UBU8 362 aa15.64■□□□□ 0.09
ERBB3-215ENST00000550828 RABGAP1Q9Y3P9 1069 aa15.64■□□□□ 0.09
ERBB3-215ENST00000550828 ZNF236Q9UL36 1845 aa15.64■□□□□ 0.09
ERBB3-215ENST00000550828 PNMA6FA0A0J9YX94 578 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 OPLAHO14841 1288 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 ATP2A1O14983 1001 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 ZBTB5O15062 677 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 ADAMTS3O15072 1205 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 ZBED4O75132 1171 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 TRPA1O75762 1119 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 ICAM1P05362 532 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 GCLCP48506 637 aaPredicted RBP15.63■□□□□ 0.09
ERBB3-215ENST00000550828 SOX10P56693 466 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 ERVK-9P63128 1117 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 ERVK-24P63145 666 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 WWC2Q6AWC2 1192 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 OTUD7BQ6GQQ9 843 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 MB21D1Q8N884 522 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 RRP36Q96EU6 259 aaKnown RBP15.63■□□□□ 0.09
ERBB3-215ENST00000550828 LLPHQ9BRT6 129 aaKnown RBP15.63■□□□□ 0.09
ERBB3-215ENST00000550828 MOV10L1Q9BXT6 1211 aaKnown RBP15.63■□□□□ 0.09
ERBB3-215ENST00000550828 SPATC1LQ9H0A9 340 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 PORCNQ9H237 461 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 ZFYVE28Q9HCC9 887 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 GJB4Q9NTQ9 266 aa15.63■□□□□ 0.09
ERBB3-215ENST00000550828 ORC3Q9UBD5 711 aaPredicted RBP15.63■□□□□ 0.09
ERBB3-215ENST00000550828 TNRC18O15417 2968 aaPredicted RBP15.63■□□□□ 0.09
ERBB3-215ENST00000550828 STXBP3O00186 592 aa15.62■□□□□ 0.09
ERBB3-215ENST00000550828 ALDH1A1P00352 501 aa15.62■□□□□ 0.09
ERBB3-215ENST00000550828 SSRP1Q08945 709 aaKnown RBP15.62■□□□□ 0.09
ERBB3-215ENST00000550828 PFKFB3Q16875 520 aaPredicted RBP15.62■□□□□ 0.09
ERBB3-215ENST00000550828 GTF3C2Q8WUA4 911 aaPredicted RBP15.62■□□□□ 0.09
ERBB3-215ENST00000550828 COA7Q96BR5 231 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms