RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 GSTO1P78417 241 aa4.99□□□□□ -1.61
CCDC59-204ENST00000550589 SEMA3FQ13275 785 aa4.99□□□□□ -1.61
CCDC59-204ENST00000550589 COL9A3Q14050 684 aaPredicted RBP4.99□□□□□ -1.61
CCDC59-204ENST00000550589 IFIT1BQ5T764 474 aaKnown RBP4.99□□□□□ -1.61
CCDC59-204ENST00000550589 CCDC186Q7Z3E2 898 aa4.99□□□□□ -1.61
CCDC59-204ENST00000550589 NBPF5PQ86XG9 351 aaPredicted RBP4.99□□□□□ -1.61
CCDC59-204ENST00000550589 TBC1D10CQ8IV04 446 aa4.99□□□□□ -1.61
CCDC59-204ENST00000550589 CCDC150Q8NCX0 1101 aa4.99□□□□□ -1.61
CCDC59-204ENST00000550589 CNNM3Q8NE01 707 aa4.99□□□□□ -1.61
CCDC59-204ENST00000550589 CTCFLQ8NI51 663 aaPredicted RBP4.99□□□□□ -1.61
CCDC59-204ENST00000550589 NGLY1Q96IV0 654 aa4.99□□□□□ -1.61
CCDC59-204ENST00000550589 SEC31BQ9NQW1 1179 aa4.99□□□□□ -1.61
CCDC59-204ENST00000550589 ARPP21Q9UBL0 812 aaPredicted RBP4.99□□□□□ -1.61
CCDC59-204ENST00000550589 NARFQ9UHQ1 456 aa4.99□□□□□ -1.61
CCDC59-204ENST00000550589 HRH3Q9Y5N1 445 aa4.99□□□□□ -1.61
CCDC59-204ENST00000550589 CLIC4Q9Y696 253 aa4.99□□□□□ -1.61
CCDC59-204ENST00000550589 NID2Q14112 1375 aa4.99□□□□□ -1.61
CCDC59-204ENST00000550589 ZNF804BA4D1E1 1349 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 COL22A1Q8NFW1 1626 aaPredicted RBP4.98□□□□□ -1.61
CCDC59-204ENST00000550589 MAN1A2O60476 641 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 RPS6KA4O75676 772 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 DDAH1O94760 285 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 LDHCP07864 332 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 HIBADHP31937 336 aaKnown RBP4.98□□□□□ -1.61
CCDC59-204ENST00000550589 IQCB1Q15051 598 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 VPS72Q15906 364 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 NTRK3Q16288 839 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 CYB5R4Q7L1T6 521 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 FAM177A1Q8N128 213 aaPredicted RBP4.98□□□□□ -1.61
CCDC59-204ENST00000550589 CRACR2BQ8N4Y2 399 aaPredicted RBP4.98□□□□□ -1.61
CCDC59-204ENST00000550589 TRIML1Q8N9V2 468 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 PLPP7Q8NBV4 271 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 MYRIPQ8NFW9 859 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 WDR66Q8TBY9 1149 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 NUP133Q8WUM0 1156 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 ZSCAN10Q96SZ4 725 aaPredicted RBP4.98□□□□□ -1.61
CCDC59-204ENST00000550589 MINPP1Q9UNW1 487 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 DOLKQ9UPQ8 538 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 MORC2Q9Y6X9 1032 aaPredicted RBP4.98□□□□□ -1.61
CCDC59-204ENST00000550589 PLCH1Q4KWH8 1693 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 SHANK3Q9BYB0 1731 aa4.98□□□□□ -1.61
CCDC59-204ENST00000550589 FAM237AA0A1B0GTK4 181 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 RANBP6O60518 1105 aaKnown RBP4.97□□□□□ -1.61
CCDC59-204ENST00000550589 SMC2O95347 1197 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 IL2RAP01589 272 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 PFKFB1P16118 471 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 YBX3P16989 372 aaKnown RBP eCLIP4.97□□□□□ -1.61
CCDC59-204ENST00000550589 CDC27P30260 824 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 GNAQP50148 359 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 RNF144AP50876 292 aaPredicted RBP4.97□□□□□ -1.61
CCDC59-204ENST00000550589 ITPK1Q13572 414 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 TPD52L1Q16890 204 aaPredicted RBP4.97□□□□□ -1.61
CCDC59-204ENST00000550589 RESP18Q5W5W9 173 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 LRRC8AQ8IWT6 810 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 DIS3L2Q8IYB7 885 aaKnown RBP4.97□□□□□ -1.61
CCDC59-204ENST00000550589 ZNF654Q8IZM8 581 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 LCORLQ8N3X6 602 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 MIGA1Q8NAN2 632 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 CCDC112Q8NEF3 446 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 PHKBQ93100 1093 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 ZNF830Q96NB3 372 aaPredicted RBP4.97□□□□□ -1.61
CCDC59-204ENST00000550589 KCNH3Q9ULD8 1083 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 LEMD3Q9Y2U8 911 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 TOGARAM1Q9Y4F4 1720 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 NEDD4P46934 1319 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 A0A0G2JLW4 131 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 PRPF3O43395 683 aaKnown RBP4.97□□□□□ -1.61
CCDC59-204ENST00000550589 DTNBO60941 627 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 SERPINC1P01008 464 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 PTGS1P23219 599 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 SFPQP23246 707 aaKnown RBP eCLIP4.97□□□□□ -1.61
CCDC59-204ENST00000550589 CALML3P27482 149 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 MARCKSP29966 332 aaPredicted RBP4.97□□□□□ -1.61
CCDC59-204ENST00000550589 RFC4P35249 363 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 GTF2F1P35269 517 aaKnown RBP eCLIP4.97□□□□□ -1.61
CCDC59-204ENST00000550589 KRT2P35908 639 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 TXLNAP40222 546 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 TRAPPC10P48553 1259 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 MYL5Q02045 173 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 PTSQ03393 145 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 TRAPPC3LQ5T215 181 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 OTUD7BQ6GQQ9 843 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 FBXO33Q7Z6M2 555 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 DZIP1Q86YF9 867 aaKnown RBP4.97□□□□□ -1.61
CCDC59-204ENST00000550589 CCDC144CPQ8IYA2 1237 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 AOPEPQ8N6M6 819 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 MLKLQ8NB16 471 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 FERMT2Q96AC1 680 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 FAM84BQ96KN1 310 aaPredicted RBP4.97□□□□□ -1.61
CCDC59-204ENST00000550589 MAP3K14Q99558 947 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 FTOQ9C0B1 505 aaKnown RBP eCLIP4.97□□□□□ -1.61
CCDC59-204ENST00000550589 GOLPH3LQ9H4A5 285 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 EPB41L4AQ9HCS5 686 aaPredicted RBP4.97□□□□□ -1.61
CCDC59-204ENST00000550589 POLMQ9NP87 494 aaPredicted RBP4.97□□□□□ -1.61
CCDC59-204ENST00000550589 RAB6BQ9NRW1 208 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 SRPRBQ9Y5M8 271 aaKnown RBP4.97□□□□□ -1.61
CCDC59-204ENST00000550589 TNKSO95271 1327 aa4.97□□□□□ -1.61
CCDC59-204ENST00000550589 ROBO1Q9Y6N7 1651 aa4.96□□□□□ -1.61
CCDC59-204ENST00000550589 TCHHQ07283 1943 aa4.96□□□□□ -1.61
CCDC59-204ENST00000550589 TRIM75PA6NK02 468 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms