RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 NEDD1Q8NHV4 660 aa12.9□□□□□ -0.34
PFDN5-210ENST00000550513 OTUD7AQ8TE49 926 aaPredicted RBP12.9□□□□□ -0.34
PFDN5-210ENST00000550513 RNPC3Q96LT9 517 aaKnown RBP12.9□□□□□ -0.34
PFDN5-210ENST00000550513 ABHD16BQ9H3Z7 469 aa12.9□□□□□ -0.34
PFDN5-210ENST00000550513 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.9□□□□□ -0.34
PFDN5-210ENST00000550513 MROH7Q68CQ1 1323 aa12.89□□□□□ -0.35
PFDN5-210ENST00000550513 PRUNE2Q8WUY3 3088 aa12.89□□□□□ -0.35
PFDN5-210ENST00000550513 MYADML2A6NDP7 307 aa12.89□□□□□ -0.35
PFDN5-210ENST00000550513 ADCY6O43306 1168 aa12.89□□□□□ -0.35
PFDN5-210ENST00000550513 DUSP11O75319 330 aaKnown RBP12.89□□□□□ -0.35
PFDN5-210ENST00000550513 C6orf222P0C671 652 aaPredicted RBP12.89□□□□□ -0.35
PFDN5-210ENST00000550513 FDX1P10109 184 aa12.89□□□□□ -0.35
PFDN5-210ENST00000550513 CST5P28325 142 aaPredicted RBP12.89□□□□□ -0.35
PFDN5-210ENST00000550513 FPGSQ05932 587 aa12.89□□□□□ -0.35
PFDN5-210ENST00000550513 ACVR2BQ13705 512 aa12.89□□□□□ -0.35
PFDN5-210ENST00000550513 PPP4R3BQ5MIZ7 849 aa12.89□□□□□ -0.35
PFDN5-210ENST00000550513 ARMCX2Q7L311 632 aa12.89□□□□□ -0.35
PFDN5-210ENST00000550513 ANKRD33Q7Z3H0 272 aa12.89□□□□□ -0.35
PFDN5-210ENST00000550513 KLHDC9Q8NEP7 349 aa12.89□□□□□ -0.35
PFDN5-210ENST00000550513 FGD4Q96M96 766 aa12.89□□□□□ -0.35
PFDN5-210ENST00000550513 GLT1D1Q96MS3 346 aa12.89□□□□□ -0.35
PFDN5-210ENST00000550513 ACAD9Q9H845 621 aa12.89□□□□□ -0.35
PFDN5-210ENST00000550513 SPC25Q9HBM1 224 aa12.89□□□□□ -0.35
PFDN5-210ENST00000550513 TMEM39AQ9NV64 488 aa12.89□□□□□ -0.35
PFDN5-210ENST00000550513 KIAA1217Q5T5P2 1943 aa12.89□□□□□ -0.35
PFDN5-210ENST00000550513 TSPY2A6NKD2 308 aa12.88□□□□□ -0.35
PFDN5-210ENST00000550513 DCDC2CA8MYV0 355 aa12.88□□□□□ -0.35
PFDN5-210ENST00000550513 TMEM232C9JQI7 657 aa12.88□□□□□ -0.35
PFDN5-210ENST00000550513 SLC1A4P43007 532 aa12.88□□□□□ -0.35
PFDN5-210ENST00000550513 TFAP4Q01664 338 aa12.88□□□□□ -0.35
PFDN5-210ENST00000550513 FAAP100Q0VG06 881 aa12.88□□□□□ -0.35
PFDN5-210ENST00000550513 KCNA10Q16322 511 aa12.88□□□□□ -0.35
PFDN5-210ENST00000550513 CCDC144BQ3MJ40 725 aa12.88□□□□□ -0.35
PFDN5-210ENST00000550513 CCSAPQ6IQ19 270 aaPredicted RBP12.88□□□□□ -0.35
PFDN5-210ENST00000550513 FAM160B2Q86V87 743 aa12.88□□□□□ -0.35
PFDN5-210ENST00000550513 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.88□□□□□ -0.35
PFDN5-210ENST00000550513 PCSK9Q8NBP7 692 aaKnown RBP12.88□□□□□ -0.35
PFDN5-210ENST00000550513 GMCL1Q96IK5 515 aa12.88□□□□□ -0.35
PFDN5-210ENST00000550513 TOX2Q96NM4 488 aa12.88□□□□□ -0.35
PFDN5-210ENST00000550513 RNF146Q9NTX7 359 aa12.88□□□□□ -0.35
PFDN5-210ENST00000550513 STX8Q9UNK0 236 aa12.88□□□□□ -0.35
PFDN5-210ENST00000550513 PCDHB15Q9Y5E8 787 aa12.88□□□□□ -0.35
PFDN5-210ENST00000550513 SALL3Q9BXA9 1300 aa12.88□□□□□ -0.35
PFDN5-210ENST00000550513 ASGR1P07306 291 aa12.87□□□□□ -0.35
PFDN5-210ENST00000550513 CCDC129Q6ZRS4 1044 aa12.87□□□□□ -0.35
PFDN5-210ENST00000550513 CCDC144CPQ8IYA2 1237 aa12.87□□□□□ -0.35
PFDN5-210ENST00000550513 CHURC1Q8WUH1 139 aa12.87□□□□□ -0.35
PFDN5-210ENST00000550513 CHMP4CQ96CF2 233 aa12.87□□□□□ -0.35
PFDN5-210ENST00000550513 CDX2Q99626 313 aaPredicted RBP12.87□□□□□ -0.35
PFDN5-210ENST00000550513 UPF3AQ9H1J1 476 aaKnown RBP12.87□□□□□ -0.35
PFDN5-210ENST00000550513 A1CFQ9NQ94 594 aaKnown RBP12.87□□□□□ -0.35
PFDN5-210ENST00000550513 ZBTB47Q9UFB7 747 aaPredicted RBP12.87□□□□□ -0.35
PFDN5-210ENST00000550513 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.87□□□□□ -0.35
PFDN5-210ENST00000550513 SCN5AQ14524 2016 aa12.87□□□□□ -0.35
PFDN5-210ENST00000550513 ZNF536O15090 1300 aa12.87□□□□□ -0.35
PFDN5-210ENST00000550513 ELP1O95163 1332 aa12.87□□□□□ -0.35
PFDN5-210ENST00000550513 A0A0U1RQG5 324 aaPredicted RBP12.86□□□□□ -0.35
PFDN5-210ENST00000550513 FOXP2O15409 715 aa12.86□□□□□ -0.35
PFDN5-210ENST00000550513 EPHB4P54760 987 aa12.86□□□□□ -0.35
PFDN5-210ENST00000550513 GJA9P57773 515 aa12.86□□□□□ -0.35
PFDN5-210ENST00000550513 IRX5P78411 483 aaPredicted RBP12.86□□□□□ -0.35
PFDN5-210ENST00000550513 CNTN2Q02246 1040 aa12.86□□□□□ -0.35
PFDN5-210ENST00000550513 CTDSPL2Q05D32 466 aa12.86□□□□□ -0.35
PFDN5-210ENST00000550513 KCTD1Q719H9 257 aa12.86□□□□□ -0.35
PFDN5-210ENST00000550513 RASGRP2Q7LDG7 609 aa12.86□□□□□ -0.35
PFDN5-210ENST00000550513 FAM133AQ8N9E0 248 aa12.86□□□□□ -0.35
PFDN5-210ENST00000550513 STAG1Q8WVM7 1258 aa12.86□□□□□ -0.35
PFDN5-210ENST00000550513 AGBL1Q96MI9 1066 aa12.86□□□□□ -0.35
PFDN5-210ENST00000550513 KATNBL1Q9H079 304 aa12.86□□□□□ -0.35
PFDN5-210ENST00000550513 TTYH1Q9H313 450 aaPredicted RBP12.86□□□□□ -0.35
PFDN5-210ENST00000550513 SEMA6BQ9H3T3 888 aa12.86□□□□□ -0.35
PFDN5-210ENST00000550513 TBX21Q9UL17 535 aa12.86□□□□□ -0.35
PFDN5-210ENST00000550513 VCANP13611 3396 aa12.86□□□□□ -0.35
PFDN5-210ENST00000550513 TMEM265A0A087WTH1 108 aa12.85□□□□□ -0.35
PFDN5-210ENST00000550513 NMT2O60551 498 aa12.85□□□□□ -0.35
PFDN5-210ENST00000550513 TIMP1P01033 207 aa12.85□□□□□ -0.35
PFDN5-210ENST00000550513 ALAS1P13196 640 aa12.85□□□□□ -0.35
PFDN5-210ENST00000550513 MCCP23508 829 aa12.85□□□□□ -0.35
PFDN5-210ENST00000550513 CCDC96Q2M329 555 aa12.85□□□□□ -0.35
PFDN5-210ENST00000550513 TKFCQ3LXA3 575 aa12.85□□□□□ -0.35
PFDN5-210ENST00000550513 GNASQ5JWF2 1037 aa12.85□□□□□ -0.35
PFDN5-210ENST00000550513 CCDC174Q6PII3 467 aa12.85□□□□□ -0.35
PFDN5-210ENST00000550513 MAFAQ8NHW3 353 aaPredicted RBP12.85□□□□□ -0.35
PFDN5-210ENST00000550513 MYLIPQ8WY64 445 aa12.85□□□□□ -0.35
PFDN5-210ENST00000550513 VTI1AQ96AJ9 217 aa12.85□□□□□ -0.35
PFDN5-210ENST00000550513 TRERF1Q96PN7 1200 aa12.85□□□□□ -0.35
PFDN5-210ENST00000550513 SCN10AQ9Y5Y9 1956 aa12.84□□□□□ -0.35
PFDN5-210ENST00000550513 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.84□□□□□ -0.35
PFDN5-210ENST00000550513 ASB14A6NK59 587 aa12.84□□□□□ -0.35
PFDN5-210ENST00000550513 TLR3O15455 904 aaKnown RBP12.84□□□□□ -0.35
PFDN5-210ENST00000550513 RANBP6O60518 1105 aaKnown RBP12.84□□□□□ -0.35
PFDN5-210ENST00000550513 PLA2G6O60733 806 aa12.84□□□□□ -0.35
PFDN5-210ENST00000550513 FOSL2P15408 326 aa12.84□□□□□ -0.35
PFDN5-210ENST00000550513 RRP1P56182 461 aaKnown RBP12.84□□□□□ -0.35
PFDN5-210ENST00000550513 TNFAIP2Q03169 654 aa12.84□□□□□ -0.35
PFDN5-210ENST00000550513 VPS53Q5VIR6 699 aa12.84□□□□□ -0.35
PFDN5-210ENST00000550513 TLK2Q86UE8 772 aa12.84□□□□□ -0.35
PFDN5-210ENST00000550513 EVI5LQ96CN4 794 aa12.84□□□□□ -0.35
PFDN5-210ENST00000550513 COL25A1Q9BXS0 654 aaPredicted RBP12.84□□□□□ -0.35
PFDN5-210ENST00000550513 IL17RBQ9NRM6 502 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms