RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 CCDC96Q2M329 555 aa23.48■■□□□ 1.35
GCN1-207ENST00000550471 GJC2Q5T442 439 aaPredicted RBP23.48■■□□□ 1.35
GCN1-207ENST00000550471 CWC27Q6UX04 472 aaKnown RBP23.48■■□□□ 1.35
GCN1-207ENST00000550471 IQCA1Q86XH1 822 aa23.48■■□□□ 1.35
GCN1-207ENST00000550471 DGKHQ86XP1 1220 aa23.48■■□□□ 1.35
GCN1-207ENST00000550471 SPC25Q9HBM1 224 aa23.48■■□□□ 1.35
GCN1-207ENST00000550471 PRR12Q9ULL5 1215 aa23.48■■□□□ 1.35
GCN1-207ENST00000550471 ALPK3Q96L96 1907 aa23.48■■□□□ 1.35
GCN1-207ENST00000550471 ASB14A6NK59 587 aa23.47■■□□□ 1.35
GCN1-207ENST00000550471 POTEB2H3BUK9 544 aa23.47■■□□□ 1.35
GCN1-207ENST00000550471 NMT2O60551 498 aa23.47■■□□□ 1.35
GCN1-207ENST00000550471 IMMTQ16891 758 aaKnown RBP23.47■■□□□ 1.35
GCN1-207ENST00000550471 SLC39A5Q6ZMH5 540 aa23.47■■□□□ 1.35
GCN1-207ENST00000550471 KCTD1Q719H9 257 aa23.47■■□□□ 1.35
GCN1-207ENST00000550471 LBHD1Q9BQE6 289 aaPredicted RBP23.47■■□□□ 1.35
GCN1-207ENST00000550471 TMEM47Q9BQJ4 181 aa23.47■■□□□ 1.35
GCN1-207ENST00000550471 INCENPQ9NQS7 918 aa23.47■■□□□ 1.35
GCN1-207ENST00000550471 RNF146Q9NTX7 359 aa23.47■■□□□ 1.35
GCN1-207ENST00000550471 PHF24Q9UPV7 400 aa23.47■■□□□ 1.35
GCN1-207ENST00000550471 PLXNA1Q9UIW2 1896 aa23.47■■□□□ 1.35
GCN1-207ENST00000550471 LOC102724159A0A0B4J2E5 919 aa23.46■■□□□ 1.35
GCN1-207ENST00000550471 ICAM1P05362 532 aa23.46■■□□□ 1.35
GCN1-207ENST00000550471 SNX17Q15036 470 aa23.46■■□□□ 1.35
GCN1-207ENST00000550471 PWP2Q15269 919 aaKnown RBP23.46■■□□□ 1.35
GCN1-207ENST00000550471 GPATCH4Q5T3I0 446 aaKnown RBP23.46■■□□□ 1.35
GCN1-207ENST00000550471 GPR153Q6NV75 609 aa23.46■■□□□ 1.35
GCN1-207ENST00000550471 RUFY2Q8WXA3 655 aa23.46■■□□□ 1.35
GCN1-207ENST00000550471 RAD50Q92878 1312 aa23.46■■□□□ 1.35
GCN1-207ENST00000550471 TRERF1Q96PN7 1200 aa23.46■■□□□ 1.35
GCN1-207ENST00000550471 MAF1Q9H063 256 aa23.46■■□□□ 1.35
GCN1-207ENST00000550471 ZNF536O15090 1300 aa23.45■■□□□ 1.34
GCN1-207ENST00000550471 MOXD2PA6NHM9 499 aa23.45■■□□□ 1.34
GCN1-207ENST00000550471 DUSP11O75319 330 aaKnown RBP23.45■■□□□ 1.34
GCN1-207ENST00000550471 MAGEA10P43363 369 aaPredicted RBP23.45■■□□□ 1.34
GCN1-207ENST00000550471 RTP1P59025 263 aa23.45■■□□□ 1.34
GCN1-207ENST00000550471 HAND2P61296 217 aa23.45■■□□□ 1.34
GCN1-207ENST00000550471 ACVR2BQ13705 512 aa23.45■■□□□ 1.34
GCN1-207ENST00000550471 NUP133Q8WUM0 1156 aa23.45■■□□□ 1.34
GCN1-207ENST00000550471 RANBP17Q9H2T7 1088 aaKnown RBP23.45■■□□□ 1.34
GCN1-207ENST00000550471 CNNM2Q9H8M5 875 aa23.45■■□□□ 1.34
GCN1-207ENST00000550471 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.45■■□□□ 1.34
GCN1-207ENST00000550471 SNAI1O95863 264 aaPredicted RBP23.44■■□□□ 1.34
GCN1-207ENST00000550471 ALAS1P13196 640 aa23.44■■□□□ 1.34
GCN1-207ENST00000550471 SYDE2Q5VT97 1194 aa23.44■■□□□ 1.34
GCN1-207ENST00000550471 FAM133AQ8N9E0 248 aa23.44■■□□□ 1.34
GCN1-207ENST00000550471 PCSK9Q8NBP7 692 aaKnown RBP23.44■■□□□ 1.34
GCN1-207ENST00000550471 KRT23Q9C075 422 aa23.44■■□□□ 1.34
GCN1-207ENST00000550471 UBE2OQ9C0C9 1292 aaKnown RBP23.44■■□□□ 1.34
GCN1-207ENST00000550471 HOMER2Q9NSB8 354 aa23.44■■□□□ 1.34
GCN1-207ENST00000550471 ZHX1Q9UKY1 873 aaPredicted RBP23.44■■□□□ 1.34
GCN1-207ENST00000550471 CCPG1Q9ULG6 757 aa23.44■■□□□ 1.34
GCN1-207ENST00000550471 TACC3Q9Y6A5 838 aa23.44■■□□□ 1.34
GCN1-207ENST00000550471 MYCNP04198 464 aaPredicted RBP23.43■■□□□ 1.34
GCN1-207ENST00000550471 SYN1P17600 705 aa23.43■■□□□ 1.34
GCN1-207ENST00000550471 ADCYAP1R1P41586 468 aa23.43■■□□□ 1.34
GCN1-207ENST00000550471 ATN1P54259 1190 aaPredicted RBP23.43■■□□□ 1.34
GCN1-207ENST00000550471 ANO1Q5XXA6 986 aa23.43■■□□□ 1.34
GCN1-207ENST00000550471 ARMCX2Q7L311 632 aa23.43■■□□□ 1.34
GCN1-207ENST00000550471 TDHQ8IZJ6 230 aa23.43■■□□□ 1.34
GCN1-207ENST00000550471 AGBL1Q96MI9 1066 aa23.43■■□□□ 1.34
GCN1-207ENST00000550471 A1CFQ9NQ94 594 aaKnown RBP23.43■■□□□ 1.34
GCN1-207ENST00000550471 SNHG28P0DPA3 235 aa23.42■■□□□ 1.34
GCN1-207ENST00000550471 PDHBP11177 359 aa23.42■■□□□ 1.34
GCN1-207ENST00000550471 CST5P28325 142 aaPredicted RBP23.42■■□□□ 1.34
GCN1-207ENST00000550471 LRIT3Q3SXY7 679 aa23.42■■□□□ 1.34
GCN1-207ENST00000550471 TTC22Q5TAA0 569 aa23.42■■□□□ 1.34
GCN1-207ENST00000550471 MPHOSPH6Q99547 160 aaKnown RBP23.42■■□□□ 1.34
GCN1-207ENST00000550471 ADD3Q9UEY8 706 aaKnown RBP23.42■■□□□ 1.34
GCN1-207ENST00000550471 TAL1P17542 331 aaPredicted RBP23.41■■□□□ 1.34
GCN1-207ENST00000550471 CCDC174Q6PII3 467 aa23.41■■□□□ 1.34
GCN1-207ENST00000550471 TBC1D10CQ8IV04 446 aa23.41■■□□□ 1.34
GCN1-207ENST00000550471 ANKS1AQ92625 1134 aa23.41■■□□□ 1.34
GCN1-207ENST00000550471 ATP11BQ9Y2G3 1177 aa23.41■■□□□ 1.34
GCN1-207ENST00000550471 WDR19Q8NEZ3 1342 aa23.4■■□□□ 1.34
GCN1-207ENST00000550471 ADAMTS4O75173 837 aa23.4■■□□□ 1.34
GCN1-207ENST00000550471 ZNF543Q08ER8 600 aa23.4■■□□□ 1.34
GCN1-207ENST00000550471 CCDC144CPQ8IYA2 1237 aa23.4■■□□□ 1.34
GCN1-207ENST00000550471 CYP39A1Q9NYL5 469 aa23.4■■□□□ 1.34
GCN1-207ENST00000550471 MTMR7Q9Y216 660 aa23.4■■□□□ 1.34
GCN1-207ENST00000550471 B4DLN1 442 aa23.39■■□□□ 1.33
GCN1-207ENST00000550471 PGK1P00558 417 aa23.39■■□□□ 1.33
GCN1-207ENST00000550471 MRPL12P52815 198 aaKnown RBP23.39■■□□□ 1.33
GCN1-207ENST00000550471 NKX3-2P78367 333 aa23.39■■□□□ 1.33
GCN1-207ENST00000550471 KLHDC9Q8NEP7 349 aa23.39■■□□□ 1.33
GCN1-207ENST00000550471 TOX2Q96NM4 488 aa23.39■■□□□ 1.33
GCN1-207ENST00000550471 SEZ6LQ9BYH1 1024 aa23.39■■□□□ 1.33
GCN1-207ENST00000550471 KAT14Q9H8E8 782 aa23.39■■□□□ 1.33
GCN1-207ENST00000550471 ELP1O95163 1332 aa23.38■■□□□ 1.33
GCN1-207ENST00000550471 MROH7Q68CQ1 1323 aa23.38■■□□□ 1.33
GCN1-207ENST00000550471 SYNRGQ9UMZ2 1314 aa23.38■■□□□ 1.33
GCN1-207ENST00000550471 KDM4AO75164 1064 aa23.38■■□□□ 1.33
GCN1-207ENST00000550471 GJA9P57773 515 aa23.38■■□□□ 1.33
GCN1-207ENST00000550471 CCDC144BQ3MJ40 725 aa23.38■■□□□ 1.33
GCN1-207ENST00000550471 FGD4Q96M96 766 aa23.38■■□□□ 1.33
GCN1-207ENST00000550471 GLT1D1Q96MS3 346 aa23.38■■□□□ 1.33
GCN1-207ENST00000550471 ZSCAN10Q96SZ4 725 aaPredicted RBP23.38■■□□□ 1.33
GCN1-207ENST00000550471 UPF3AQ9H1J1 476 aaKnown RBP23.38■■□□□ 1.33
GCN1-207ENST00000550471 Q9Y3F1 56 aa23.38■■□□□ 1.33
GCN1-207ENST00000550471 SMCHD1A6NHR9 2005 aa23.38■■□□□ 1.33
GCN1-207ENST00000550471 NEDD4P46934 1319 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms