RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 ZNF467Q7Z7K2 595 aaPredicted RBP18.53■□□□□ 0.56
TCHP-208ENST00000549550 CPXCR1Q8N123 301 aa18.53■□□□□ 0.56
TCHP-208ENST00000549550 TMEM199Q8N511 208 aa18.53■□□□□ 0.56
TCHP-208ENST00000549550 ATXN2LQ8WWM7 1075 aaKnown RBP18.53■□□□□ 0.56
TCHP-208ENST00000549550 SPC25Q9HBM1 224 aa18.53■□□□□ 0.56
TCHP-208ENST00000549550 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.53■□□□□ 0.56
TCHP-208ENST00000549550 PCDHB15Q9Y5E8 787 aa18.53■□□□□ 0.56
TCHP-208ENST00000549550 A0A0U1RQG5 324 aaPredicted RBP18.52■□□□□ 0.56
TCHP-208ENST00000549550 ARVCFO00192 962 aa18.52■□□□□ 0.56
TCHP-208ENST00000549550 GJA9P57773 515 aa18.52■□□□□ 0.56
TCHP-208ENST00000549550 UBE3CQ15386 1083 aa18.52■□□□□ 0.56
TCHP-208ENST00000549550 GNASQ5JWF2 1037 aa18.52■□□□□ 0.56
TCHP-208ENST00000549550 PSRC1Q6PGN9 363 aaPredicted RBP18.52■□□□□ 0.56
TCHP-208ENST00000549550 ZNF365Q70YC5 407 aa18.52■□□□□ 0.56
TCHP-208ENST00000549550 FAM126BQ8IXS8 530 aa18.52■□□□□ 0.56
TCHP-208ENST00000549550 PRPF38AQ8NAV1 312 aaKnown RBP18.52■□□□□ 0.56
TCHP-208ENST00000549550 UPF3AQ9H1J1 476 aaKnown RBP18.52■□□□□ 0.56
TCHP-208ENST00000549550 ABHD16BQ9H3Z7 469 aa18.52■□□□□ 0.56
TCHP-208ENST00000549550 THEGQ9P2T0 379 aa18.52■□□□□ 0.56
TCHP-208ENST00000549550 TCF20Q9UGU0 1960 aaKnown RBP18.51■□□□□ 0.55
TCHP-208ENST00000549550 F5H6K3 240 aa18.51■□□□□ 0.55
TCHP-208ENST00000549550 NDUFB10O96000 172 aa18.51■□□□□ 0.55
TCHP-208ENST00000549550 ATP5JP18859 108 aa18.51■□□□□ 0.55
TCHP-208ENST00000549550 KLRC3Q07444 240 aa18.51■□□□□ 0.55
TCHP-208ENST00000549550 FGD4Q96M96 766 aa18.51■□□□□ 0.55
TCHP-208ENST00000549550 ASB2Q96Q27 587 aa18.51■□□□□ 0.55
TCHP-208ENST00000549550 HAUS7Q99871 368 aa18.51■□□□□ 0.55
TCHP-208ENST00000549550 PUS7LQ9H0K6 701 aaKnown RBP18.51■□□□□ 0.55
TCHP-208ENST00000549550 ARPP21Q9UBL0 812 aaPredicted RBP18.51■□□□□ 0.55
TCHP-208ENST00000549550 LRRC37A2A6NM11 1700 aa18.51■□□□□ 0.55
TCHP-208ENST00000549550 ATP2A1O14983 1001 aa18.5■□□□□ 0.55
TCHP-208ENST00000549550 TLR3O15455 904 aaKnown RBP18.5■□□□□ 0.55
TCHP-208ENST00000549550 ZBED4O75132 1171 aa18.5■□□□□ 0.55
TCHP-208ENST00000549550 RASA1P20936 1047 aa18.5■□□□□ 0.55
TCHP-208ENST00000549550 CYP2C18P33260 490 aa18.5■□□□□ 0.55
TCHP-208ENST00000549550 ADGRE1Q14246 886 aa18.5■□□□□ 0.55
TCHP-208ENST00000549550 CCDC85BQ15834 202 aaPredicted RBP18.5■□□□□ 0.55
TCHP-208ENST00000549550 STK11IPQ8N1F8 1099 aa18.5■□□□□ 0.55
TCHP-208ENST00000549550 ANKRD35Q8N283 1001 aa18.5■□□□□ 0.55
TCHP-208ENST00000549550 ADAMTS19Q8TE59 1207 aa18.5■□□□□ 0.55
TCHP-208ENST00000549550 RAVER2Q9HCJ3 691 aaKnown RBP18.5■□□□□ 0.55
TCHP-208ENST00000549550 NYAP2Q9P242 653 aa18.5■□□□□ 0.55
TCHP-208ENST00000549550 RAPGEFL1Q9UHV5 662 aa18.5■□□□□ 0.55
TCHP-208ENST00000549550 CTDP1Q9Y5B0 961 aaPredicted RBP18.5■□□□□ 0.55
TCHP-208ENST00000549550 CTAGE5O15320 804 aa18.49■□□□□ 0.55
TCHP-208ENST00000549550 HMMRO75330 724 aa18.49■□□□□ 0.55
TCHP-208ENST00000549550 RAB30Q15771 203 aa18.49■□□□□ 0.55
TCHP-208ENST00000549550 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.49■□□□□ 0.55
TCHP-208ENST00000549550 ARMCX2Q7L311 632 aa18.49■□□□□ 0.55
TCHP-208ENST00000549550 SIRT2Q8IXJ6 389 aa18.49■□□□□ 0.55
TCHP-208ENST00000549550 KIFC2Q96AC6 838 aa18.49■□□□□ 0.55
TCHP-208ENST00000549550 MKNK2Q9HBH9 465 aa18.49■□□□□ 0.55
TCHP-208ENST00000549550 IL23AQ9NPF7 189 aa18.49■□□□□ 0.55
TCHP-208ENST00000549550 MSRAQ9UJ68 235 aa18.49■□□□□ 0.55
TCHP-208ENST00000549550 RAB11FIP3O75154 756 aa18.48■□□□□ 0.55
TCHP-208ENST00000549550 CD4P01730 458 aa18.48■□□□□ 0.55
TCHP-208ENST00000549550 IGFBP4P22692 258 aa18.48■□□□□ 0.55
TCHP-208ENST00000549550 MRPS5P82675 430 aaKnown RBP18.48■□□□□ 0.55
TCHP-208ENST00000549550 ZSCAN25Q6NSZ9 544 aa18.48■□□□□ 0.55
TCHP-208ENST00000549550 SMC5Q8IY18 1101 aa18.48■□□□□ 0.55
TCHP-208ENST00000549550 CCDC144CPQ8IYA2 1237 aa18.48■□□□□ 0.55
TCHP-208ENST00000549550 HERVK_113Q902F9 699 aa18.48■□□□□ 0.55
TCHP-208ENST00000549550 KATNBL1Q9H079 304 aa18.48■□□□□ 0.55
TCHP-208ENST00000549550 NKX2-4Q9H2Z4 354 aa18.48■□□□□ 0.55
TCHP-208ENST00000549550 SLC38A10Q9HBR0 1119 aa18.48■□□□□ 0.55
TCHP-208ENST00000549550 CXXC1Q9P0U4 656 aaPredicted RBP18.48■□□□□ 0.55
TCHP-208ENST00000549550 CLIP2Q9UDT6 1046 aa18.48■□□□□ 0.55
TCHP-208ENST00000549550 FBXO40Q9UH90 709 aa18.48■□□□□ 0.55
TCHP-208ENST00000549550 IGHDP01880 384 aa18.47■□□□□ 0.55
TCHP-208ENST00000549550 BEX3Q00994 111 aa18.47■□□□□ 0.55
TCHP-208ENST00000549550 SBK1Q52WX2 424 aa18.47■□□□□ 0.55
TCHP-208ENST00000549550 CHST13Q8NET6 341 aa18.47■□□□□ 0.55
TCHP-208ENST00000549550 HOMER2Q9NSB8 354 aa18.47■□□□□ 0.55
TCHP-208ENST00000549550 MINDY4BA8MYZ0 360 aa18.46■□□□□ 0.55
TCHP-208ENST00000549550 FGBP02675 491 aa18.46■□□□□ 0.55
TCHP-208ENST00000549550 NKX3-2P78367 333 aa18.46■□□□□ 0.55
TCHP-208ENST00000549550 STRBPQ96SI9 672 aaKnown RBP18.46■□□□□ 0.55
TCHP-208ENST00000549550 UHRF1Q96T88 793 aaPredicted RBP18.46■□□□□ 0.55
TCHP-208ENST00000549550 MTIF3Q9H2K0 278 aaKnown RBP18.46■□□□□ 0.55
TCHP-208ENST00000549550 HIPK3Q9H422 1215 aa18.46■□□□□ 0.55
TCHP-208ENST00000549550 SLC28A3Q9HAS3 691 aa18.46■□□□□ 0.55
TCHP-208ENST00000549550 YBX2Q9Y2T7 364 aaKnown RBP18.46■□□□□ 0.55
TCHP-208ENST00000549550 UMODL1Q5DID0 1318 aa18.46■□□□□ 0.55
TCHP-208ENST00000549550 LCTP09848 1927 aa18.45■□□□□ 0.54
TCHP-208ENST00000549550 IGKV6D-41A0A0C4DH26 115 aa18.45■□□□□ 0.54
TCHP-208ENST00000549550 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.45■□□□□ 0.54
TCHP-208ENST00000549550 GSG1L2A8MUP6 293 aa18.45■□□□□ 0.54
TCHP-208ENST00000549550 OAZ1P54368 228 aa18.45■□□□□ 0.54
TCHP-208ENST00000549550 CNTN2Q02246 1040 aa18.45■□□□□ 0.54
TCHP-208ENST00000549550 TNFAIP2Q03169 654 aa18.45■□□□□ 0.54
TCHP-208ENST00000549550 CXCL17Q6UXB2 119 aa18.45■□□□□ 0.54
TCHP-208ENST00000549550 NOL8Q76FK4 1167 aaKnown RBP18.45■□□□□ 0.54
TCHP-208ENST00000549550 OTOP2Q7RTS6 562 aa18.45■□□□□ 0.54
TCHP-208ENST00000549550 SLC43A3Q8NBI5 491 aa18.45■□□□□ 0.54
TCHP-208ENST00000549550 IL27Q8NEV9 243 aa18.45■□□□□ 0.54
TCHP-208ENST00000549550 FEM1BQ9UK73 627 aa18.45■□□□□ 0.54
TCHP-208ENST00000549550 ASTN1O14525 1302 aa18.45■□□□□ 0.54
TCHP-208ENST00000549550 LRRC47Q8N1G4 583 aaKnown RBP18.44■□□□□ 0.54
TCHP-208ENST00000549550 CEP95Q96GE4 821 aa18.44■□□□□ 0.54
TCHP-208ENST00000549550 SCN5AQ14524 2016 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms