RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 DNAJC25-GNG10A0A024R161 153 aa14.67□□□□□ -0.06
DDX54-206ENST00000549271 EPOPA6NHQ4 379 aa14.67□□□□□ -0.06
DDX54-206ENST00000549271 POLR3DP05423 398 aaPredicted RBP14.67□□□□□ -0.06
DDX54-206ENST00000549271 COPB2P35606 906 aa14.67□□□□□ -0.06
DDX54-206ENST00000549271 STAT3P40763 770 aa14.67□□□□□ -0.06
DDX54-206ENST00000549271 NKX3-2P78367 333 aa14.67□□□□□ -0.06
DDX54-206ENST00000549271 CLEC10AQ8IUN9 316 aa14.67□□□□□ -0.06
DDX54-206ENST00000549271 REPS2Q8NFH8 660 aa14.67□□□□□ -0.06
DDX54-206ENST00000549271 CD320Q9NPF0 282 aa14.67□□□□□ -0.06
DDX54-206ENST00000549271 ZHX1Q9UKY1 873 aaPredicted RBP14.67□□□□□ -0.06
DDX54-206ENST00000549271 PRR33A8MZF0 331 aa14.66□□□□□ -0.06
DDX54-206ENST00000549271 VWA5AO00534 786 aa14.66□□□□□ -0.06
DDX54-206ENST00000549271 RAB11FIP3O75154 756 aa14.66□□□□□ -0.06
DDX54-206ENST00000549271 GNASQ5JWF2 1037 aa14.66□□□□□ -0.06
DDX54-206ENST00000549271 KRT40Q6A162 431 aa14.66□□□□□ -0.06
DDX54-206ENST00000549271 SAMD1Q6SPF0 538 aaPredicted RBP14.66□□□□□ -0.06
DDX54-206ENST00000549271 ZNF467Q7Z7K2 595 aaPredicted RBP14.66□□□□□ -0.06
DDX54-206ENST00000549271 HLA-CQ95604 372 aa14.66□□□□□ -0.06
DDX54-206ENST00000549271 YTHDC1Q96MU7 727 aaKnown RBP14.66□□□□□ -0.06
DDX54-206ENST00000549271 NOC4LQ9BVI4 516 aaKnown RBP14.66□□□□□ -0.06
DDX54-206ENST00000549271 WNT8AQ9H1J5 351 aa14.66□□□□□ -0.06
DDX54-206ENST00000549271 SPC25Q9HBM1 224 aa14.66□□□□□ -0.06
DDX54-206ENST00000549271 ARHGEF10LQ9HCE6 1279 aa14.66□□□□□ -0.06
DDX54-206ENST00000549271 DCP1AQ9NPI6 582 aaPredicted RBP14.66□□□□□ -0.06
DDX54-206ENST00000549271 FBXO28Q9NVF7 368 aa14.66□□□□□ -0.06
DDX54-206ENST00000549271 MCM9Q9NXL9 1143 aa14.66□□□□□ -0.06
DDX54-206ENST00000549271 ZNF532Q9HCE3 1301 aa14.66□□□□□ -0.06
DDX54-206ENST00000549271 GOLIM4O00461 696 aa14.65□□□□□ -0.06
DDX54-206ENST00000549271 CA3P07451 260 aa14.65□□□□□ -0.06
DDX54-206ENST00000549271 IFIT2P09913 472 aaKnown RBP14.65□□□□□ -0.06
DDX54-206ENST00000549271 ATP2A2P16615 1042 aaKnown RBP14.65□□□□□ -0.06
DDX54-206ENST00000549271 CCL23P55773 120 aa14.65□□□□□ -0.06
DDX54-206ENST00000549271 ACVR2BQ13705 512 aa14.65□□□□□ -0.06
DDX54-206ENST00000549271 CCDC144BQ3MJ40 725 aa14.65□□□□□ -0.06
DDX54-206ENST00000549271 SH2D4AQ9H788 454 aa14.65□□□□□ -0.06
DDX54-206ENST00000549271 SWAP70Q9UH65 585 aa14.65□□□□□ -0.06
DDX54-206ENST00000549271 PPP1R9AQ9ULJ8 1098 aa14.65□□□□□ -0.06
DDX54-206ENST00000549271 COL4A4P53420 1690 aaPredicted RBP14.65□□□□□ -0.06
DDX54-206ENST00000549271 SCN5AQ14524 2016 aa14.65□□□□□ -0.06
DDX54-206ENST00000549271 ICA1Q05084 483 aa14.64□□□□□ -0.07
DDX54-206ENST00000549271 TMEM67Q5HYA8 995 aa14.64□□□□□ -0.07
DDX54-206ENST00000549271 RPUSD2Q8IZ73 545 aaKnown RBP14.64□□□□□ -0.07
DDX54-206ENST00000549271 LCORLQ8N3X6 602 aa14.64□□□□□ -0.07
DDX54-206ENST00000549271 ABHD16BQ9H3Z7 469 aa14.64□□□□□ -0.07
DDX54-206ENST00000549271 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.64□□□□□ -0.07
DDX54-206ENST00000549271 GRIN2DO15399 1336 aa14.64□□□□□ -0.07
DDX54-206ENST00000549271 ATP5JP18859 108 aa14.63□□□□□ -0.07
DDX54-206ENST00000549271 ADD2P35612 726 aa14.63□□□□□ -0.07
DDX54-206ENST00000549271 RRP1P56182 461 aaKnown RBP14.63□□□□□ -0.07
DDX54-206ENST00000549271 NHLH1Q02575 133 aa14.63□□□□□ -0.07
DDX54-206ENST00000549271 SDR42E1Q8WUS8 393 aa14.63□□□□□ -0.07
DDX54-206ENST00000549271 FGD4Q96M96 766 aa14.63□□□□□ -0.07
DDX54-206ENST00000549271 AGBL1Q96MI9 1066 aa14.63□□□□□ -0.07
DDX54-206ENST00000549271 DNAJC2Q99543 621 aaKnown RBP14.63□□□□□ -0.07
DDX54-206ENST00000549271 KATNBL1Q9H079 304 aa14.63□□□□□ -0.07
DDX54-206ENST00000549271 CERS4Q9HA82 394 aa14.63□□□□□ -0.07
DDX54-206ENST00000549271 ATP8A2Q9NTI2 1148 aa14.63□□□□□ -0.07
DDX54-206ENST00000549271 ZBBXA8MT70 800 aa14.62□□□□□ -0.07
DDX54-206ENST00000549271 AKR1B1P15121 316 aa14.62□□□□□ -0.07
DDX54-206ENST00000549271 BEX3Q00994 111 aa14.62□□□□□ -0.07
DDX54-206ENST00000549271 TTLL4Q14679 1199 aa14.62□□□□□ -0.07
DDX54-206ENST00000549271 CXCL17Q6UXB2 119 aa14.62□□□□□ -0.07
DDX54-206ENST00000549271 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.62□□□□□ -0.07
DDX54-206ENST00000549271 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
DDX54-206ENST00000549271 SEZ6LQ9BYH1 1024 aa14.62□□□□□ -0.07
DDX54-206ENST00000549271 PAG1Q9NWQ8 432 aa14.62□□□□□ -0.07
DDX54-206ENST00000549271 RIPK3Q9Y572 518 aa14.62□□□□□ -0.07
DDX54-206ENST00000549271 BAZ2AQ9UIF9 1905 aaKnown RBP14.62□□□□□ -0.07
DDX54-206ENST00000549271 ASTN1O14525 1302 aa14.62□□□□□ -0.07
DDX54-206ENST00000549271 PTPRSQ13332 1948 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 ZNF318Q5VUA4 2279 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 B4GALT4O60513 344 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 CABYRO75952 493 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 ARHGEF15O94989 841 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 PFKMP08237 780 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 CYP2D6P10635 497 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 TAP1Q03518 808 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 ITGA7Q13683 1181 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 UBE3CQ15386 1083 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 SCLYQ96I15 445 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 CCDC17Q96LX7 622 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 HAUS7Q99871 368 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 TEX13BQ9BXU2 312 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.61□□□□□ -0.076e-7■□□□□ 8.8
DDX54-206ENST00000549271 TRPV6Q9H1D0 765 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 DCTPP1Q9H773 170 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 ARMT1Q9H993 441 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 PCDHB15Q9Y5E8 787 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 TRIOO75962 3097 aa14.61□□□□□ -0.07
DDX54-206ENST00000549271 SMARCA5O60264 1052 aaPredicted RBP14.6□□□□□ -0.07
DDX54-206ENST00000549271 LPXNO60711 386 aa14.6□□□□□ -0.07
DDX54-206ENST00000549271 GRB10Q13322 594 aa14.6□□□□□ -0.07
DDX54-206ENST00000549271 C12orf60Q5U649 245 aa14.6□□□□□ -0.07
DDX54-206ENST00000549271 SNRNP48Q6IEG0 339 aaKnown RBP14.6□□□□□ -0.07
DDX54-206ENST00000549271 ARMCX2Q7L311 632 aa14.6□□□□□ -0.07
DDX54-206ENST00000549271 ARNTL2Q8WYA1 636 aa14.6□□□□□ -0.07
DDX54-206ENST00000549271 DYNLL2Q96FJ2 89 aa14.6□□□□□ -0.07
DDX54-206ENST00000549271 BCL11AQ9H165 835 aa14.6□□□□□ -0.07
DDX54-206ENST00000549271 KCNH6Q9H252 994 aa14.6□□□□□ -0.07
DDX54-206ENST00000549271 BOLA2Q9H3K6 86 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms