RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 HOXC10Q9NYD6 342 aa16.27■□□□□ 0.2
CACNB3-211ENST00000549226 PCDHA4Q9UN74 947 aa16.27■□□□□ 0.2
CACNB3-211ENST00000549226 GOLGA6L22H0YM25 854 aa16.26■□□□□ 0.19
CACNB3-211ENST00000549226 DTNBO60941 627 aa16.26■□□□□ 0.19
CACNB3-211ENST00000549226 ZBED4O75132 1171 aa16.26■□□□□ 0.19
CACNB3-211ENST00000549226 OAZ1P54368 228 aa16.26■□□□□ 0.19
CACNB3-211ENST00000549226 GUCY1B3Q02153 619 aa16.26■□□□□ 0.19
CACNB3-211ENST00000549226 COG2Q14746 738 aa16.26■□□□□ 0.19
CACNB3-211ENST00000549226 CSPP1Q1MSJ5 1256 aa16.26■□□□□ 0.19
CACNB3-211ENST00000549226 CST9Q5W186 159 aa16.26■□□□□ 0.19
CACNB3-211ENST00000549226 GTF3C2Q8WUA4 911 aaPredicted RBP16.26■□□□□ 0.19
CACNB3-211ENST00000549226 PIBF1Q8WXW3 757 aa16.26■□□□□ 0.19
CACNB3-211ENST00000549226 WNK4Q96J92 1243 aa16.26■□□□□ 0.19
CACNB3-211ENST00000549226 SLC38A10Q9HBR0 1119 aa16.26■□□□□ 0.19
CACNB3-211ENST00000549226 AGTPBP1Q9UPW5 1226 aa16.26■□□□□ 0.19
CACNB3-211ENST00000549226 SLC45A1Q9Y2W3 748 aa16.26■□□□□ 0.19
CACNB3-211ENST00000549226 CTDP1Q9Y5B0 961 aaPredicted RBP16.26■□□□□ 0.19
CACNB3-211ENST00000549226 CETPP11597 493 aa16.25■□□□□ 0.19
CACNB3-211ENST00000549226 PTMSP20962 102 aa16.25■□□□□ 0.19
CACNB3-211ENST00000549226 DSG3P32926 999 aa16.25■□□□□ 0.19
CACNB3-211ENST00000549226 MRPL12P52815 198 aaKnown RBP16.25■□□□□ 0.19
CACNB3-211ENST00000549226 FOSBP53539 338 aa16.25■□□□□ 0.19
CACNB3-211ENST00000549226 HUNKP57058 714 aa16.25■□□□□ 0.19
CACNB3-211ENST00000549226 OTUD7BQ6GQQ9 843 aa16.25■□□□□ 0.19
CACNB3-211ENST00000549226 NOSTRINQ8IVI9 506 aa16.25■□□□□ 0.19
CACNB3-211ENST00000549226 MB21D1Q8N884 522 aa16.25■□□□□ 0.19
CACNB3-211ENST00000549226 CNKSR2Q8WXI2 1034 aa16.25■□□□□ 0.19
CACNB3-211ENST00000549226 GPKOWQ92917 476 aaPredicted RBP eCLIP16.25■□□□□ 0.19
CACNB3-211ENST00000549226 HHIPL1Q96JK4 782 aa16.25■□□□□ 0.19
CACNB3-211ENST00000549226 ZNF396Q96N95 335 aaPredicted RBP16.25■□□□□ 0.19
CACNB3-211ENST00000549226 MAF1Q9H063 256 aa16.25■□□□□ 0.19
CACNB3-211ENST00000549226 KCNJ14Q9UNX9 436 aa16.25■□□□□ 0.19
CACNB3-211ENST00000549226 PCDHA1Q9Y5I3 950 aa16.25■□□□□ 0.19
CACNB3-211ENST00000549226 PHIPQ8WWQ0 1821 aa16.24■□□□□ 0.19
CACNB3-211ENST00000549226 ABCB11O95342 1321 aa16.24■□□□□ 0.19
CACNB3-211ENST00000549226 ICAM1P05362 532 aa16.24■□□□□ 0.19
CACNB3-211ENST00000549226 YY1P25490 414 aa16.24■□□□□ 0.19
CACNB3-211ENST00000549226 ADCY7P51828 1080 aa16.24■□□□□ 0.19
CACNB3-211ENST00000549226 KRT85P78386 507 aa16.24■□□□□ 0.19
CACNB3-211ENST00000549226 FMR1Q06787 632 aaKnown RBP eCLIP16.24■□□□□ 0.19
CACNB3-211ENST00000549226 GADL1Q6ZQY3 521 aa16.24■□□□□ 0.19
CACNB3-211ENST00000549226 FERMT3Q86UX7 667 aa16.24■□□□□ 0.19
CACNB3-211ENST00000549226 BLIDQ8IZY5 108 aa16.24■□□□□ 0.19
CACNB3-211ENST00000549226 SAMD3Q8N6K7 520 aa16.24■□□□□ 0.19
CACNB3-211ENST00000549226 CUL5Q93034 780 aa16.24■□□□□ 0.19
CACNB3-211ENST00000549226 CFAP45Q9UL16 551 aa16.24■□□□□ 0.19
CACNB3-211ENST00000549226 PNMA3Q9UL41 463 aa16.24■□□□□ 0.19
CACNB3-211ENST00000549226 ADAMTS5Q9UNA0 930 aa16.24■□□□□ 0.19
CACNB3-211ENST00000549226 MRPL11Q9Y3B7 192 aaKnown RBP16.24■□□□□ 0.19
CACNB3-211ENST00000549226 SMCO2A6NFE2 343 aa16.23■□□□□ 0.19
CACNB3-211ENST00000549226 ATP2A1O14983 1001 aa16.23■□□□□ 0.19
CACNB3-211ENST00000549226 BAG4O95429 457 aaKnown RBP16.23■□□□□ 0.19
CACNB3-211ENST00000549226 OSBPP22059 807 aa16.23■□□□□ 0.19
CACNB3-211ENST00000549226 TRAPPC10P48553 1259 aa16.23■□□□□ 0.19
CACNB3-211ENST00000549226 IRX3P78415 501 aaPredicted RBP16.23■□□□□ 0.19
CACNB3-211ENST00000549226 RILPL1Q5EBL4 403 aa16.23■□□□□ 0.19
CACNB3-211ENST00000549226 FOXD4L5Q5VV16 416 aaPredicted RBP16.23■□□□□ 0.19
CACNB3-211ENST00000549226 SPRYD7Q5W111 196 aa16.23■□□□□ 0.19
CACNB3-211ENST00000549226 TYW1BQ6NUM6 668 aa16.23■□□□□ 0.19
CACNB3-211ENST00000549226 LBX2Q6XYB7 198 aa16.23■□□□□ 0.19
CACNB3-211ENST00000549226 SAPCD2Q86UD0 394 aa16.23■□□□□ 0.19
CACNB3-211ENST00000549226 FOXD4L4Q8WXT5 416 aaPredicted RBP16.23■□□□□ 0.19
CACNB3-211ENST00000549226 RIC8AQ9NPQ8 531 aa16.23■□□□□ 0.19
CACNB3-211ENST00000549226 GJB4Q9NTQ9 266 aa16.23■□□□□ 0.19
CACNB3-211ENST00000549226 FBXO28Q9NVF7 368 aa16.23■□□□□ 0.19
CACNB3-211ENST00000549226 NOL7Q9UMY1 257 aaKnown RBP16.23■□□□□ 0.19
CACNB3-211ENST00000549226 TLL2Q9Y6L7 1015 aa16.23■□□□□ 0.19
CACNB3-211ENST00000549226 DDX11L8A8MPP1 907 aa16.22■□□□□ 0.19
CACNB3-211ENST00000549226 BTBD18B2RXH4 712 aa16.22■□□□□ 0.19
CACNB3-211ENST00000549226 VWA5AO00534 786 aa16.22■□□□□ 0.19
CACNB3-211ENST00000549226 PPP1R11O60927 126 aaPredicted RBP16.22■□□□□ 0.19
CACNB3-211ENST00000549226 GJA5P36382 358 aa16.22■□□□□ 0.19
CACNB3-211ENST00000549226 NPY5RQ15761 445 aa16.22■□□□□ 0.19
CACNB3-211ENST00000549226 TKFCQ3LXA3 575 aa16.22■□□□□ 0.19
CACNB3-211ENST00000549226 MYSM1Q5VVJ2 828 aa16.22■□□□□ 0.19
CACNB3-211ENST00000549226 KRT25Q7Z3Z0 450 aa16.22■□□□□ 0.19
CACNB3-211ENST00000549226 REXO1Q8N1G1 1221 aaKnown RBP16.22■□□□□ 0.19
CACNB3-211ENST00000549226 SHISA4Q96DD7 197 aa16.22■□□□□ 0.19
CACNB3-211ENST00000549226 SCAND2PQ9GZW5 306 aaPredicted RBP16.22■□□□□ 0.19
CACNB3-211ENST00000549226 PSTPIP2Q9H939 334 aa16.22■□□□□ 0.19
CACNB3-211ENST00000549226 LOC285556D6RIA3 1793 aa16.21■□□□□ 0.19
CACNB3-211ENST00000549226 TMEM88BA6NKF7 163 aa16.21■□□□□ 0.19
CACNB3-211ENST00000549226 M0R2N6 131 aa16.21■□□□□ 0.19
CACNB3-211ENST00000549226 COPB2P35606 906 aa16.21■□□□□ 0.19
CACNB3-211ENST00000549226 AP3B2Q13367 1082 aa16.21■□□□□ 0.19
CACNB3-211ENST00000549226 DGKZQ13574 1117 aa16.21■□□□□ 0.19
CACNB3-211ENST00000549226 MOGSQ13724 837 aa16.21■□□□□ 0.19
CACNB3-211ENST00000549226 RGMBQ6NW40 437 aa16.21■□□□□ 0.19
CACNB3-211ENST00000549226 ANKRD23Q86SG2 305 aa16.21■□□□□ 0.19
CACNB3-211ENST00000549226 MCF2L2Q86YR7 1114 aa16.21■□□□□ 0.19
CACNB3-211ENST00000549226 TNFRSF25Q93038 417 aa16.21■□□□□ 0.19
CACNB3-211ENST00000549226 CCDC102AQ96A19 550 aa16.21■□□□□ 0.19
CACNB3-211ENST00000549226 COA7Q96BR5 231 aa16.21■□□□□ 0.19
CACNB3-211ENST00000549226 ZCCHC17Q9NP64 241 aaKnown RBP16.21■□□□□ 0.19
CACNB3-211ENST00000549226 MAP3K20Q9NYL2 800 aaKnown RBP16.21■□□□□ 0.19
CACNB3-211ENST00000549226 CCPG1Q9ULG6 757 aa16.21■□□□□ 0.19
CACNB3-211ENST00000549226 TRPM7Q96QT4 1865 aa16.2■□□□□ 0.18
CACNB3-211ENST00000549226 CCDC194A0A1B0GVG4 234 aa16.2■□□□□ 0.18
CACNB3-211ENST00000549226 MANSC4A6NHS7 340 aaPredicted RBP16.2■□□□□ 0.18
CACNB3-211ENST00000549226 SPDYE16A6NNV3 312 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms