RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 CDC37Q16543 378 aaPredicted RBP24.47■■□□□ 1.51
CACNB3-210ENST00000548874 Q3C1V9 767 aa24.47■■□□□ 1.51
CACNB3-210ENST00000548874 NOM1Q5C9Z4 860 aaKnown RBP24.47■■□□□ 1.51
CACNB3-210ENST00000548874 NECAB1Q8N987 351 aa24.47■■□□□ 1.51
CACNB3-210ENST00000548874 GPRC5AQ8NFJ5 357 aa24.47■■□□□ 1.51
CACNB3-210ENST00000548874 SNX21Q969T3 373 aa24.47■■□□□ 1.51
CACNB3-210ENST00000548874 VAT1LQ9HCJ6 419 aa24.47■■□□□ 1.51
CACNB3-210ENST00000548874 CCDC82Q8N4S0 544 aa24.46■■□□□ 1.51
CACNB3-210ENST00000548874 PIGSQ96S52 555 aa24.46■■□□□ 1.51
CACNB3-210ENST00000548874 SPATC1LQ9H0A9 340 aa24.46■■□□□ 1.51
CACNB3-210ENST00000548874 ZBTB5O15062 677 aa24.45■■□□□ 1.5
CACNB3-210ENST00000548874 ICAM1P05362 532 aa24.45■■□□□ 1.5
CACNB3-210ENST00000548874 QRICH1Q2TAL8 776 aa24.45■■□□□ 1.5
CACNB3-210ENST00000548874 TMX3Q96JJ7 454 aa24.45■■□□□ 1.5
CACNB3-210ENST00000548874 TEX13BQ9BXU2 312 aa24.45■■□□□ 1.5
CACNB3-210ENST00000548874 RAVER2Q9HCJ3 691 aaKnown RBP24.45■■□□□ 1.5
CACNB3-210ENST00000548874 CTDP1Q9Y5B0 961 aaPredicted RBP24.45■■□□□ 1.5
CACNB3-210ENST00000548874 GPR25O00155 361 aa24.44■■□□□ 1.5
CACNB3-210ENST00000548874 CPLX1O14810 134 aa24.44■■□□□ 1.5
CACNB3-210ENST00000548874 STAT3P40763 770 aa24.44■■□□□ 1.5
CACNB3-210ENST00000548874 CCDC174Q6PII3 467 aa24.44■■□□□ 1.5
CACNB3-210ENST00000548874 RIOX2Q8IUF8 465 aa24.44■■□□□ 1.5
CACNB3-210ENST00000548874 CPXCR1Q8N123 301 aa24.44■■□□□ 1.5
CACNB3-210ENST00000548874 RRP36Q96EU6 259 aaKnown RBP24.44■■□□□ 1.5
CACNB3-210ENST00000548874 MOV10L1Q9BXT6 1211 aaKnown RBP24.44■■□□□ 1.5
CACNB3-210ENST00000548874 PNMA2Q9UL42 364 aa24.44■■□□□ 1.5
CACNB3-210ENST00000548874 BAZ2BQ9UIF8 2168 aaKnown RBP24.44■■□□□ 1.5
CACNB3-210ENST00000548874 PNMA6FA0A0J9YX94 578 aa24.43■■□□□ 1.5
CACNB3-210ENST00000548874 PPP1R11O60927 126 aaPredicted RBP24.43■■□□□ 1.5
CACNB3-210ENST00000548874 CTDNEP1O95476 244 aa24.43■■□□□ 1.5
CACNB3-210ENST00000548874 CPLX2Q6PUV4 134 aaKnown RBP24.43■■□□□ 1.5
CACNB3-210ENST00000548874 HOMER1Q86YM7 354 aa24.43■■□□□ 1.5
CACNB3-210ENST00000548874 AGBL1Q96MI9 1066 aa24.43■■□□□ 1.5
CACNB3-210ENST00000548874 RNF26Q9BY78 433 aaPredicted RBP24.43■■□□□ 1.5
CACNB3-210ENST00000548874 PRPF3O43395 683 aaKnown RBP24.42■■□□□ 1.5
CACNB3-210ENST00000548874 CCNA1P78396 465 aa24.42■■□□□ 1.5
CACNB3-210ENST00000548874 PLS1Q14651 629 aa24.42■■□□□ 1.5
CACNB3-210ENST00000548874 SNRNP48Q6IEG0 339 aaKnown RBP24.42■■□□□ 1.5
CACNB3-210ENST00000548874 CCDC83Q8IWF9 413 aa24.42■■□□□ 1.5
CACNB3-210ENST00000548874 SHCBP1Q8NEM2 672 aa24.42■■□□□ 1.5
CACNB3-210ENST00000548874 PHKBQ93100 1093 aa24.42■■□□□ 1.5
CACNB3-210ENST00000548874 TSKSQ9UJT2 592 aa24.42■■□□□ 1.5
CACNB3-210ENST00000548874 RIPK3Q9Y572 518 aa24.42■■□□□ 1.5
CACNB3-210ENST00000548874 V9GY48 417 aaPredicted RBP24.42■■□□□ 1.5
CACNB3-210ENST00000548874 CDKL5O76039 1030 aa24.41■■□□□ 1.5
CACNB3-210ENST00000548874 FMNL1O95466 1100 aaPredicted RBP24.41■■□□□ 1.5
CACNB3-210ENST00000548874 SLC25A27O95847 323 aa24.41■■□□□ 1.5
CACNB3-210ENST00000548874 SP3Q02447 781 aa24.41■■□□□ 1.5
CACNB3-210ENST00000548874 FBXO11Q86XK2 927 aa24.41■■□□□ 1.5
CACNB3-210ENST00000548874 PIBF1Q8WXW3 757 aa24.41■■□□□ 1.5
CACNB3-210ENST00000548874 PORCNQ9H237 461 aa24.41■■□□□ 1.5
CACNB3-210ENST00000548874 RBM27Q9P2N5 1060 aaKnown RBP24.41■■□□□ 1.5
CACNB3-210ENST00000548874 SEC63Q9UGP8 760 aaKnown RBP24.41■■□□□ 1.5
CACNB3-210ENST00000548874 CCPG1Q9ULG6 757 aa24.41■■□□□ 1.5
CACNB3-210ENST00000548874 hCG_1642624A0A1W2PR95 340 aa24.4■■□□□ 1.5
CACNB3-210ENST00000548874 HSPA1AP0DMV8 641 aaKnown RBP24.4■■□□□ 1.5
CACNB3-210ENST00000548874 HSPA1BP0DMV9 641 aaKnown RBP24.4■■□□□ 1.5
CACNB3-210ENST00000548874 COPB2P35606 906 aa24.4■■□□□ 1.5
CACNB3-210ENST00000548874 TKFCQ3LXA3 575 aa24.4■■□□□ 1.5
CACNB3-210ENST00000548874 NSUN7Q8NE18 718 aaKnown RBP24.4■■□□□ 1.5
CACNB3-210ENST00000548874 AMNQ9BXJ7 453 aa24.4■■□□□ 1.5
CACNB3-210ENST00000548874 SLC26A6Q9BXS9 759 aa24.4■■□□□ 1.5
CACNB3-210ENST00000548874 STK36Q9NRP7 1315 aa24.39■■□□□ 1.5
CACNB3-210ENST00000548874 FOXN1O15353 648 aa24.39■■□□□ 1.49
CACNB3-210ENST00000548874 TAL1P17542 331 aaPredicted RBP24.39■■□□□ 1.49
CACNB3-210ENST00000548874 ERCC3P19447 782 aa24.39■■□□□ 1.49
CACNB3-210ENST00000548874 LACTBP83111 547 aaPredicted RBP24.39■■□□□ 1.49
CACNB3-210ENST00000548874 PKN1Q16512 942 aa24.39■■□□□ 1.49
CACNB3-210ENST00000548874 LLPHQ9BRT6 129 aaKnown RBP24.39■■□□□ 1.49
CACNB3-210ENST00000548874 EFCC1Q9HA90 598 aa24.39■■□□□ 1.49
CACNB3-210ENST00000548874 MYH6P13533 1939 aa24.39■■□□□ 1.49
CACNB3-210ENST00000548874 K7ELQ4 463 aaPredicted RBP24.38■■□□□ 1.49
CACNB3-210ENST00000548874 PPFIA3O75145 1194 aa24.38■■□□□ 1.49
CACNB3-210ENST00000548874 MAPK4P31152 587 aa24.38■■□□□ 1.49
CACNB3-210ENST00000548874 SSRP1Q08945 709 aaKnown RBP24.38■■□□□ 1.49
CACNB3-210ENST00000548874 TRAF1Q13077 416 aa24.38■■□□□ 1.49
CACNB3-210ENST00000548874 CUL4AQ13619 759 aa24.38■■□□□ 1.49
CACNB3-210ENST00000548874 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.38■■□□□ 1.49
CACNB3-210ENST00000548874 TRIM22Q8IYM9 498 aa24.38■■□□□ 1.49
CACNB3-210ENST00000548874 ZNF296Q8WUU4 475 aaPredicted RBP24.38■■□□□ 1.49
CACNB3-210ENST00000548874 MROH8Q9H579 483 aa24.38■■□□□ 1.49
CACNB3-210ENST00000548874 ABCB11O95342 1321 aa24.37■■□□□ 1.49
CACNB3-210ENST00000548874 PTPDC1A2A3K4 754 aa24.37■■□□□ 1.49
CACNB3-210ENST00000548874 FKTNO75072 461 aa24.37■■□□□ 1.49
CACNB3-210ENST00000548874 HSPA8P11142 646 aaKnown RBP24.37■■□□□ 1.49
CACNB3-210ENST00000548874 ALAS1P13196 640 aa24.37■■□□□ 1.49
CACNB3-210ENST00000548874 CTGFP29279 349 aa24.37■■□□□ 1.49
CACNB3-210ENST00000548874 PFKFB3Q16875 520 aaPredicted RBP24.37■■□□□ 1.49
CACNB3-210ENST00000548874 USH1GQ495M9 461 aa24.37■■□□□ 1.49
CACNB3-210ENST00000548874 NCAPG2Q86XI2 1143 aa24.37■■□□□ 1.49
CACNB3-210ENST00000548874 CHST13Q8NET6 341 aa24.37■■□□□ 1.49
CACNB3-210ENST00000548874 SMARCC2Q8TAQ2 1214 aa24.37■■□□□ 1.49
CACNB3-210ENST00000548874 RNF146Q9NTX7 359 aa24.37■■□□□ 1.49
CACNB3-210ENST00000548874 PCDHA1Q9Y5I3 950 aa24.37■■□□□ 1.49
CACNB3-210ENST00000548874 SMCHD1A6NHR9 2005 aa24.37■■□□□ 1.49
CACNB3-210ENST00000548874 PCNTO95613 3336 aa24.37■■□□□ 1.49
CACNB3-210ENST00000548874 hCG_1984214I3L0E3 225 aa24.36■■□□□ 1.49
CACNB3-210ENST00000548874 JAK2O60674 1132 aa24.36■■□□□ 1.49
CACNB3-210ENST00000548874 DEXIO95424 95 aa24.36■■□□□ 1.49
CACNB3-210ENST00000548874 SCG2P13521 617 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms