RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 PRPF6O94906 941 aaKnown RBP11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 IPO7O95373 1038 aaKnown RBP11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 PMS1P54277 932 aaKnown RBP11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 CDK17Q00537 523 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 SBK1Q52WX2 424 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 TTI2Q6NXR4 508 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 ZNF384Q8TF68 577 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 COG1Q8WTW3 980 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 TRIM47Q96LD4 638 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 CUEDC2Q9H467 287 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 MAGEF1Q9HAY2 307 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 ATP8A2Q9NTI2 1148 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 EXOC1Q9NV70 894 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 ZNHIT6Q9NWK9 470 aaKnown RBP11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 SLAIN2Q9P270 581 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 HDAC6Q9UBN7 1215 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 HPCAL4Q9UM19 191 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 SCN7AQ01118 1682 aa11.07□□□□□ -0.64
SMARCD1-205ENST00000548573 M0R2N6 131 aa11.06□□□□□ -0.64
SMARCD1-205ENST00000548573 ADAMTS3O15072 1205 aa11.06□□□□□ -0.64
SMARCD1-205ENST00000548573 RNF40O75150 1001 aa11.06□□□□□ -0.64
SMARCD1-205ENST00000548573 PPP1R2P41236 205 aa11.06□□□□□ -0.64
SMARCD1-205ENST00000548573 ZBED6P86452 979 aa11.06□□□□□ -0.64
SMARCD1-205ENST00000548573 FIGNQ5HY92 759 aa11.06□□□□□ -0.64
SMARCD1-205ENST00000548573 IQCEQ6IPM2 695 aa11.06□□□□□ -0.64
SMARCD1-205ENST00000548573 GALNT17Q6IS24 598 aa11.06□□□□□ -0.64
SMARCD1-205ENST00000548573 IQCDQ96DY2 449 aa11.06□□□□□ -0.64
SMARCD1-205ENST00000548573 PURBQ96QR8 312 aaKnown RBP11.06□□□□□ -0.64
SMARCD1-205ENST00000548573 DCP1AQ9NPI6 582 aaPredicted RBP11.06□□□□□ -0.64
SMARCD1-205ENST00000548573 ARPP21Q9UBL0 812 aaPredicted RBP11.06□□□□□ -0.64
SMARCD1-205ENST00000548573 FAM205AQ6ZU69 1335 aa11.06□□□□□ -0.64
SMARCD1-205ENST00000548573 ZC3H4Q9UPT8 1303 aaKnown RBP11.06□□□□□ -0.64
SMARCD1-205ENST00000548573 A0A1W2PQJ5 194 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 BICDL2A1A5D9 508 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 NMT2O60551 498 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 PHACTR2O75167 634 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 VEGFAP15692 232 aaPredicted RBP11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 TRIM21P19474 475 aaKnown RBP11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 PRPHP41219 470 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 UBA7P41226 1012 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 LRRC31Q6UY01 552 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 ANKRD18AQ8IVF6 992 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 FAM114A1Q8IWE2 563 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 C10orf67Q8IYJ2 551 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 DAGLBQ8NCG7 672 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 AFAP1L1Q8TED9 768 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 RUBCNQ92622 972 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 NSUN4Q96CB9 384 aaKnown RBP11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 TUBGCP2Q9BSJ2 902 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 TRIM34Q9BYJ4 488 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 CRNKL1Q9BZJ0 848 aaKnown RBP11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 TSGA10Q9BZW7 698 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 NHEJ1Q9H9Q4 299 aaPredicted RBP11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 BTG4Q9NY30 223 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 NIP7Q9Y221 180 aaKnown RBP eCLIP11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 CCDC194A0A1B0GVG4 234 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 B4DLN1 442 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 EXOC5O00471 708 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 PES1O00541 588 aaKnown RBP11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 TRIM66O15016 1216 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 SRGAP2O75044 1071 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 CCNE1P24864 410 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 TNNT3P45378 269 aaPredicted RBP11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 FAM47AQ5JRC9 791 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 RCSD1Q6JBY9 416 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 FNBP4Q8N3X1 1017 aaPredicted RBP11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 CSGALNACT2Q8N6G5 542 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 RASSF8Q8NHQ8 419 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 CCDC47Q96A33 483 aaKnown RBP11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 FAM84BQ96KN1 310 aaPredicted RBP11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 DUSP9Q99956 384 aaKnown RBP11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 AGPAT5Q9NUQ2 364 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 BSDC1Q9NW68 430 aaPredicted RBP11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 COL4A1P02462 1669 aa11.05□□□□□ -0.64
SMARCD1-205ENST00000548573 RASSF10A6NK89 507 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 TSPY2A6NKD2 308 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 CRKLP46109 303 aaKnown RBP11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 GNAQP50148 359 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 VAV2P52735 878 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 ITIH3Q06033 890 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 TBC1D8BQ0IIM8 1120 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 CCNI2Q6ZMN8 369 aaPredicted RBP11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 DGKHQ86XP1 1220 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 ZSCAN29Q8IWY8 852 aaPredicted RBP11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 ANKS1AQ92625 1134 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 P2RX5Q93086 422 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 AK8Q96MA6 479 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 ERGIC2Q96RQ1 377 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 LACRTQ9GZZ8 138 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 KIAA1551Q9HCM1 1747 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 RCCD1A6NED2 376 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 PPFIA4O75335 1185 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 ADAMTS2O95450 1211 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 IDEP14735 1019 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 PRLRP16471 622 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 MECOMQ03112 1051 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 KIF5AQ12840 1032 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 SF3B3Q15393 1217 aaKnown RBP11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 COBLL1Q53SF7 1204 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 CCDC70Q6NSX1 233 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms