RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 ARMCX2Q7L311 632 aa19.65■□□□□ 0.74
SSH1-208ENST00000548522 ANKRD35Q8N283 1001 aa19.65■□□□□ 0.74
SSH1-208ENST00000548522 SEC62Q99442 399 aaKnown RBP19.65■□□□□ 0.74
SSH1-208ENST00000548522 TMEM265A0A087WTH1 108 aa19.64■□□□□ 0.73
SSH1-208ENST00000548522 GRXCR1A8MXD5 290 aa19.64■□□□□ 0.73
SSH1-208ENST00000548522 PBX2P40425 430 aa19.64■□□□□ 0.73
SSH1-208ENST00000548522 CDK7P50613 346 aa19.64■□□□□ 0.73
SSH1-208ENST00000548522 RASGRP2Q7LDG7 609 aa19.64■□□□□ 0.73
SSH1-208ENST00000548522 CCDC144CPQ8IYA2 1237 aa19.64■□□□□ 0.73
SSH1-208ENST00000548522 GLT1D1Q96MS3 346 aa19.64■□□□□ 0.73
SSH1-208ENST00000548522 UPF3AQ9H1J1 476 aaKnown RBP19.64■□□□□ 0.73
SSH1-208ENST00000548522 CTDP1Q9Y5B0 961 aaPredicted RBP19.64■□□□□ 0.73
SSH1-208ENST00000548522 CHD7Q9P2D1 2997 aa19.63■□□□□ 0.73
SSH1-208ENST00000548522 PLIN4Q96Q06 1357 aa19.63■□□□□ 0.73
SSH1-208ENST00000548522 ASTN1O14525 1302 aa19.63■□□□□ 0.73
SSH1-208ENST00000548522 ELP1O95163 1332 aa19.63■□□□□ 0.73
SSH1-208ENST00000548522 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.63■□□□□ 0.73
SSH1-208ENST00000548522 TTLL1O95922 423 aa19.63■□□□□ 0.73
SSH1-208ENST00000548522 APPP05067 770 aa19.63■□□□□ 0.73
SSH1-208ENST00000548522 CSF2RAP15509 400 aa19.63■□□□□ 0.73
SSH1-208ENST00000548522 GJA9P57773 515 aa19.63■□□□□ 0.73
SSH1-208ENST00000548522 BEX3Q00994 111 aa19.63■□□□□ 0.73
SSH1-208ENST00000548522 SLFN13Q68D06 897 aa19.63■□□□□ 0.73
SSH1-208ENST00000548522 MFSD5Q6N075 450 aa19.63■□□□□ 0.73
SSH1-208ENST00000548522 ZNF444Q8N0Y2 327 aaPredicted RBP19.63■□□□□ 0.73
SSH1-208ENST00000548522 GMCL1P1Q8NEA9 526 aa19.63■□□□□ 0.73
SSH1-208ENST00000548522 MKL1Q969V6 931 aa19.63■□□□□ 0.73
SSH1-208ENST00000548522 PPP1R12CQ9BZL4 782 aa19.63■□□□□ 0.73
SSH1-208ENST00000548522 ABHD16BQ9H3Z7 469 aa19.63■□□□□ 0.73
SSH1-208ENST00000548522 CHMP4BQ9H444 224 aaKnown RBP19.63■□□□□ 0.73
SSH1-208ENST00000548522 FEM1BQ9UK73 627 aa19.63■□□□□ 0.73
SSH1-208ENST00000548522 MCM3APO60318 1980 aa19.63■□□□□ 0.73
SSH1-208ENST00000548522 ZNF536O15090 1300 aa19.62■□□□□ 0.73
SSH1-208ENST00000548522 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.62■□□□□ 0.73
SSH1-208ENST00000548522 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.62■□□□□ 0.73
SSH1-208ENST00000548522 ACRP10323 421 aa19.62■□□□□ 0.73
SSH1-208ENST00000548522 GNASQ5JWF2 1037 aa19.62■□□□□ 0.73
SSH1-208ENST00000548522 TMEM240Q5SV17 173 aa19.62■□□□□ 0.73
SSH1-208ENST00000548522 FAM126BQ8IXS8 530 aa19.62■□□□□ 0.73
SSH1-208ENST00000548522 IFNL3Q8IZI9 196 aa19.62■□□□□ 0.73
SSH1-208ENST00000548522 CHST13Q8NET6 341 aa19.62■□□□□ 0.73
SSH1-208ENST00000548522 TIFAQ96CG3 184 aa19.62■□□□□ 0.73
SSH1-208ENST00000548522 ZNF576Q9H609 170 aa19.62■□□□□ 0.73
SSH1-208ENST00000548522 ISY1Q9ULR0 285 aaKnown RBP19.62■□□□□ 0.73
SSH1-208ENST00000548522 MYH4Q9Y623 1939 aa19.62■□□□□ 0.73
SSH1-208ENST00000548522 SOWAHBA6NEL2 793 aa19.61■□□□□ 0.73
SSH1-208ENST00000548522 TMEM232C9JQI7 657 aa19.61■□□□□ 0.73
SSH1-208ENST00000548522 ARVCFO00192 962 aa19.61■□□□□ 0.73
SSH1-208ENST00000548522 BMP3P12645 472 aa19.61■□□□□ 0.73
SSH1-208ENST00000548522 OAZ1P54368 228 aa19.61■□□□□ 0.73
SSH1-208ENST00000548522 SNAP25P60880 206 aa19.61■□□□□ 0.73
SSH1-208ENST00000548522 FAM133AQ8N9E0 248 aa19.61■□□□□ 0.73
SSH1-208ENST00000548522 OTUD7AQ8TE49 926 aaPredicted RBP19.61■□□□□ 0.73
SSH1-208ENST00000548522 VTI1AQ96AJ9 217 aa19.61■□□□□ 0.73
SSH1-208ENST00000548522 AGBL1Q96MI9 1066 aa19.61■□□□□ 0.73
SSH1-208ENST00000548522 PBX4Q9BYU1 374 aa19.61■□□□□ 0.73
SSH1-208ENST00000548522 A1CFQ9NQ94 594 aaKnown RBP19.61■□□□□ 0.73
SSH1-208ENST00000548522 PRDM6Q9NQX0 595 aa19.61■□□□□ 0.73
SSH1-208ENST00000548522 FBXO40Q9UH90 709 aa19.61■□□□□ 0.73
SSH1-208ENST00000548522 XIRP2A4UGR9 3374 aa19.6■□□□□ 0.73
SSH1-208ENST00000548522 MROH7Q68CQ1 1323 aa19.6■□□□□ 0.73
SSH1-208ENST00000548522 A0A0U1RQG5 324 aaPredicted RBP19.6■□□□□ 0.73
SSH1-208ENST00000548522 ZFYP08048 801 aaPredicted RBP19.6■□□□□ 0.73
SSH1-208ENST00000548522 TSPY3P0CV98 308 aa19.6■□□□□ 0.73
SSH1-208ENST00000548522 TSPY8P0CW00 308 aa19.6■□□□□ 0.73
SSH1-208ENST00000548522 GNAT2P19087 354 aa19.6■□□□□ 0.73
SSH1-208ENST00000548522 TMEM63BQ5T3F8 832 aa19.6■□□□□ 0.73
SSH1-208ENST00000548522 RASIP1Q5U651 963 aa19.6■□□□□ 0.73
SSH1-208ENST00000548522 PCSK9Q8NBP7 692 aaKnown RBP19.6■□□□□ 0.73
SSH1-208ENST00000548522 NEDD1Q8NHV4 660 aa19.6■□□□□ 0.73
SSH1-208ENST00000548522 GPATCH3Q96I76 525 aa19.6■□□□□ 0.73
SSH1-208ENST00000548522 DCTPP1Q9H773 170 aa19.6■□□□□ 0.73
SSH1-208ENST00000548522 RNF146Q9NTX7 359 aa19.6■□□□□ 0.73
SSH1-208ENST00000548522 LRRC37A2A6NM11 1700 aa19.59■□□□□ 0.73
SSH1-208ENST00000548522 UMODL1Q5DID0 1318 aa19.59■□□□□ 0.73
SSH1-208ENST00000548522 PATL2C9JE40 543 aaKnown RBP19.59■□□□□ 0.73
SSH1-208ENST00000548522 FOXP2O15409 715 aa19.59■□□□□ 0.73
SSH1-208ENST00000548522 CYP2C18P33260 490 aa19.59■□□□□ 0.73
SSH1-208ENST00000548522 STAT2P52630 851 aa19.59■□□□□ 0.73
SSH1-208ENST00000548522 TFAP4Q01664 338 aa19.59■□□□□ 0.73
SSH1-208ENST00000548522 PPIGQ13427 754 aaKnown RBP eCLIP19.59■□□□□ 0.731e-7■■■■■ 29.8
SSH1-208ENST00000548522 CXCL17Q6UXB2 119 aa19.59■□□□□ 0.73
SSH1-208ENST00000548522 ACAD9Q9H845 621 aa19.59■□□□□ 0.73
SSH1-208ENST00000548522 SPC25Q9HBM1 224 aa19.59■□□□□ 0.73
SSH1-208ENST00000548522 INCENPQ9NQS7 918 aa19.59■□□□□ 0.73
SSH1-208ENST00000548522 SYNPO2Q9UMS6 1093 aa19.59■□□□□ 0.73
SSH1-208ENST00000548522 PPARAQ07869 468 aa19.58■□□□□ 0.72
SSH1-208ENST00000548522 ZNF365Q70YC5 407 aa19.58■□□□□ 0.72
SSH1-208ENST00000548522 KCTD1Q719H9 257 aa19.58■□□□□ 0.72
SSH1-208ENST00000548522 PI4K2BQ8TCG2 481 aa19.58■□□□□ 0.72
SSH1-208ENST00000548522 PURBQ96QR8 312 aaKnown RBP19.58■□□□□ 0.72
SSH1-208ENST00000548522 ZNF287Q9HBT7 754 aa19.58■□□□□ 0.72
SSH1-208ENST00000548522 CXXC1Q9P0U4 656 aaPredicted RBP19.58■□□□□ 0.72
SSH1-208ENST00000548522 GRIN2DO15399 1336 aa19.57■□□□□ 0.72
SSH1-208ENST00000548522 NMT2O60551 498 aa19.57■□□□□ 0.72
SSH1-208ENST00000548522 CD4P01730 458 aa19.57■□□□□ 0.72
SSH1-208ENST00000548522 MCCP23508 829 aa19.57■□□□□ 0.72
SSH1-208ENST00000548522 TNFAIP2Q03169 654 aa19.57■□□□□ 0.72
SSH1-208ENST00000548522 IKQ13123 557 aaPredicted RBP19.57■□□□□ 0.72
SSH1-208ENST00000548522 MUM1L1Q5H9M0 696 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms