RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 NSMFQ6X4W1 530 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 PLD6Q8N2A8 252 aaKnown RBP5.97□□□□□ -1.45
PTCH1-216ENST00000548379 USHBP1Q8N6Y0 703 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 LINC00116Q8NCU8 138 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 KREMEN2Q8NCW0 462 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 NETO1Q8TDF5 533 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 COPS5Q92905 334 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 HSPA12BQ96MM6 686 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 IER2Q9BTL4 223 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 TMX1Q9H3N1 280 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 NCOA5Q9HCD5 579 aaKnown RBP5.97□□□□□ -1.45
PTCH1-216ENST00000548379 GPATCH2Q9NW75 528 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 ZC3H7BQ9UGR2 993 aaKnown RBP5.97□□□□□ -1.45
PTCH1-216ENST00000548379 ZNF281Q9Y2X9 895 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 PITPNM2Q9BZ72 1349 aa5.97□□□□□ -1.45
PTCH1-216ENST00000548379 TMEM265A0A087WTH1 108 aa5.96□□□□□ -1.46
PTCH1-216ENST00000548379 WASH4PA8MWX3 477 aa5.96□□□□□ -1.46
PTCH1-216ENST00000548379 AURKAO14965 403 aa5.96□□□□□ -1.46
PTCH1-216ENST00000548379 ZNF205O95201 554 aa5.96□□□□□ -1.46
PTCH1-216ENST00000548379 IGHA1P01876 353 aa5.96□□□□□ -1.46
PTCH1-216ENST00000548379 GYS2P54840 703 aa5.96□□□□□ -1.46
PTCH1-216ENST00000548379 SUMO1P63165 101 aaKnown RBP5.96□□□□□ -1.46
PTCH1-216ENST00000548379 CLEC16AQ2KHT3 1053 aa5.96□□□□□ -1.46
PTCH1-216ENST00000548379 FNDC3BQ53EP0 1204 aaKnown RBP5.96□□□□□ -1.46
PTCH1-216ENST00000548379 DALRD3Q5D0E6 543 aaKnown RBP5.96□□□□□ -1.46
PTCH1-216ENST00000548379 CDKAL1Q5VV42 579 aa5.96□□□□□ -1.46
PTCH1-216ENST00000548379 DENND5AQ6IQ26 1287 aa5.96□□□□□ -1.46
PTCH1-216ENST00000548379 TMEM145Q8NBT3 493 aa5.96□□□□□ -1.46
PTCH1-216ENST00000548379 PUS7Q96PZ0 661 aaKnown RBP5.96□□□□□ -1.46
PTCH1-216ENST00000548379 CDC6Q99741 560 aa5.96□□□□□ -1.46
PTCH1-216ENST00000548379 SLC12A9Q9BXP2 914 aa5.96□□□□□ -1.46
PTCH1-216ENST00000548379 MRPL4Q9BYD3 311 aaKnown RBP5.96□□□□□ -1.46
PTCH1-216ENST00000548379 CWC22Q9HCG8 908 aaKnown RBP5.96□□□□□ -1.46
PTCH1-216ENST00000548379 LRRC4CQ9HCJ2 640 aa5.96□□□□□ -1.46
PTCH1-216ENST00000548379 GPR55Q9Y2T6 319 aaPredicted RBP5.96□□□□□ -1.46
PTCH1-216ENST00000548379 PRKAB1Q9Y478 270 aa5.96□□□□□ -1.46
PTCH1-216ENST00000548379 CD2APQ9Y5K6 639 aa5.96□□□□□ -1.46
PTCH1-216ENST00000548379 H3BS24 57 aa5.95□□□□□ -1.46
PTCH1-216ENST00000548379 MEIS1O00470 390 aa5.95□□□□□ -1.46
PTCH1-216ENST00000548379 CPP00450 1065 aa5.95□□□□□ -1.46
PTCH1-216ENST00000548379 VAV1P15498 845 aa5.95□□□□□ -1.46
PTCH1-216ENST00000548379 TPP2P29144 1249 aaPredicted RBP5.95□□□□□ -1.46
PTCH1-216ENST00000548379 CBX2Q14781 532 aaPredicted RBP5.95□□□□□ -1.46
PTCH1-216ENST00000548379 NTRK3Q16288 839 aa5.95□□□□□ -1.46
PTCH1-216ENST00000548379 MSMPQ1L6U9 139 aa5.95□□□□□ -1.46
PTCH1-216ENST00000548379 RTP2Q5QGT7 225 aa5.95□□□□□ -1.46
PTCH1-216ENST00000548379 RCSD1Q6JBY9 416 aa5.95□□□□□ -1.46
PTCH1-216ENST00000548379 ARHGAP27Q6ZUM4 889 aa5.95□□□□□ -1.46
PTCH1-216ENST00000548379 TMPRSS7Q7RTY8 843 aa5.95□□□□□ -1.46
PTCH1-216ENST00000548379 RB1CC1Q8TDY2 1594 aa5.95□□□□□ -1.46
PTCH1-216ENST00000548379 KCTD13Q8WZ19 329 aa5.95□□□□□ -1.46
PTCH1-216ENST00000548379 FCRL3Q96P31 734 aaPredicted RBP5.95□□□□□ -1.46
PTCH1-216ENST00000548379 PLAAQ9Y263 795 aa5.95□□□□□ -1.46
PTCH1-216ENST00000548379 ARNTLO00327 626 aa5.94□□□□□ -1.46
PTCH1-216ENST00000548379 ESR1P03372 595 aa5.94□□□□□ -1.46
PTCH1-216ENST00000548379 NCLP19338 710 aaKnown RBP5.94□□□□□ -1.46
PTCH1-216ENST00000548379 HOXA10P31260 410 aaPredicted RBP5.94□□□□□ -1.46
PTCH1-216ENST00000548379 TM4SF20Q53R12 229 aa5.94□□□□□ -1.46
PTCH1-216ENST00000548379 CWF19L1Q69YN2 538 aaKnown RBP5.94□□□□□ -1.46
PTCH1-216ENST00000548379 RNF111Q6ZNA4 994 aa5.94□□□□□ -1.46
PTCH1-216ENST00000548379 GSTCDQ8NEC7 633 aa5.94□□□□□ -1.46
PTCH1-216ENST00000548379 NPLOC4Q8TAT6 608 aa5.94□□□□□ -1.46
PTCH1-216ENST00000548379 NINJ1Q92982 152 aa5.94□□□□□ -1.46
PTCH1-216ENST00000548379 UBE2FQ969M7 185 aa5.94□□□□□ -1.46
PTCH1-216ENST00000548379 CLUHP3Q96NS8 147 aa5.94□□□□□ -1.46
PTCH1-216ENST00000548379 ZSWIM5Q9P217 1185 aa5.94□□□□□ -1.46
PTCH1-216ENST00000548379 CD3EP07766 207 aa5.93□□□□□ -1.46
PTCH1-216ENST00000548379 VIL1P09327 827 aaKnown RBP5.93□□□□□ -1.46
PTCH1-216ENST00000548379 IFNGR1P15260 489 aa5.93□□□□□ -1.46
PTCH1-216ENST00000548379 NOP2P46087 812 aaKnown RBP5.93□□□□□ -1.46
PTCH1-216ENST00000548379 PCBP3P57721 371 aaKnown RBP5.93□□□□□ -1.46
PTCH1-216ENST00000548379 PRKCQQ04759 706 aa5.93□□□□□ -1.46
PTCH1-216ENST00000548379 SCRN1Q12765 414 aa5.93□□□□□ -1.46
PTCH1-216ENST00000548379 PABPC4Q13310 644 aaKnown RBP eCLIP5.93□□□□□ -1.46
PTCH1-216ENST00000548379 PRSS53Q2L4Q9 553 aa5.93□□□□□ -1.46
PTCH1-216ENST00000548379 DPY19L1Q2PZI1 675 aa5.93□□□□□ -1.46
PTCH1-216ENST00000548379 ACBD5Q5T8D3 534 aaPredicted RBP5.93□□□□□ -1.46
PTCH1-216ENST00000548379 FRS2Q8WU20 508 aa5.93□□□□□ -1.46
PTCH1-216ENST00000548379 IPO9Q96P70 1041 aaKnown RBP5.93□□□□□ -1.46
PTCH1-216ENST00000548379 BRINP2Q9C0B6 783 aa5.93□□□□□ -1.46
PTCH1-216ENST00000548379 TRIM39Q9HCM9 518 aa5.93□□□□□ -1.46
PTCH1-216ENST00000548379 VAV3Q9UKW4 847 aa5.93□□□□□ -1.46
PTCH1-216ENST00000548379 TCFL5Q9UL49 500 aa5.93□□□□□ -1.46
PTCH1-216ENST00000548379 RNF112Q9ULX5 631 aa5.93□□□□□ -1.46
PTCH1-216ENST00000548379 NPFFR2Q9Y5X5 522 aa5.93□□□□□ -1.46
PTCH1-216ENST00000548379 BACE2Q9Y5Z0 518 aa5.93□□□□□ -1.46
PTCH1-216ENST00000548379 TMEM82A0PJX8 343 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 C2orf71A6NGG8 1288 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 STXBP3O00186 592 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 RAPGEF3O95398 923 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 TGFB1P01137 390 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 THBDP07204 575 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 SYPP08247 313 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 SNRPB2P08579 225 aaKnown RBP5.92□□□□□ -1.46
PTCH1-216ENST00000548379 MASP1P48740 699 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 CEBPAP49715 358 aaPredicted RBP5.92□□□□□ -1.46
PTCH1-216ENST00000548379 GABREP78334 506 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 TEKQ02763 1124 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 PRSS36Q5K4E3 855 aa5.92□□□□□ -1.46
PTCH1-216ENST00000548379 WFDC3Q8IUB2 231 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms