RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 BMP3P12645 472 aa8.97□□□□□ -0.97
CCDC59-203ENST00000548126 EPHA1P21709 976 aa8.97□□□□□ -0.97
CCDC59-203ENST00000548126 IL13P35225 146 aa8.97□□□□□ -0.97
CCDC59-203ENST00000548126 TEFQ10587 303 aa8.97□□□□□ -0.97
CCDC59-203ENST00000548126 HLFQ16534 295 aa8.97□□□□□ -0.97
CCDC59-203ENST00000548126 DPP8Q6V1X1 898 aaPredicted RBP8.97□□□□□ -0.97
CCDC59-203ENST00000548126 CEP120Q8N960 986 aa8.97□□□□□ -0.97
CCDC59-203ENST00000548126 MKNK1Q9BUB5 465 aa8.97□□□□□ -0.97
CCDC59-203ENST00000548126 SH2B1Q9NRF2 756 aaPredicted RBP8.97□□□□□ -0.97
CCDC59-203ENST00000548126 ABCC12Q96J65 1359 aa8.97□□□□□ -0.97
CCDC59-203ENST00000548126 RIC1Q4ADV7 1423 aa8.97□□□□□ -0.97
CCDC59-203ENST00000548126 PSMD14O00487 310 aa8.96□□□□□ -0.98
CCDC59-203ENST00000548126 PCSK2P16519 638 aa8.96□□□□□ -0.98
CCDC59-203ENST00000548126 RPS12P25398 132 aaKnown RBP8.96□□□□□ -0.98
CCDC59-203ENST00000548126 NAA30Q147X3 362 aaPredicted RBP8.96□□□□□ -0.98
CCDC59-203ENST00000548126 MOB2Q70IA6 237 aa8.96□□□□□ -0.98
CCDC59-203ENST00000548126 TTC16Q8NEE8 873 aa8.96□□□□□ -0.98
CCDC59-203ENST00000548126 SHKBP1Q8TBC3 707 aa8.96□□□□□ -0.98
CCDC59-203ENST00000548126 UBASH3BQ8TF42 649 aa8.96□□□□□ -0.98
CCDC59-203ENST00000548126 FOXD4L4Q8WXT5 416 aaPredicted RBP8.96□□□□□ -0.98
CCDC59-203ENST00000548126 DPF3Q92784 378 aa8.96□□□□□ -0.98
CCDC59-203ENST00000548126 KLHDC7BQ96G42 594 aa8.96□□□□□ -0.98
CCDC59-203ENST00000548126 RUSC1Q9BVN2 902 aa8.96□□□□□ -0.98
CCDC59-203ENST00000548126 GGA3Q9NZ52 723 aa8.96□□□□□ -0.98
CCDC59-203ENST00000548126 SPTBN5Q9NRC6 3674 aaKnown RBP8.96□□□□□ -0.98
CCDC59-203ENST00000548126 PRR19A6NJB7 356 aa8.95□□□□□ -0.98
CCDC59-203ENST00000548126 KIF4BQ2VIQ3 1234 aa8.95□□□□□ -0.98
CCDC59-203ENST00000548126 SLC4A8Q2Y0W8 1093 aa8.95□□□□□ -0.98
CCDC59-203ENST00000548126 ZNF438Q7Z4V0 828 aa8.95□□□□□ -0.98
CCDC59-203ENST00000548126 SP8Q8IXZ3 490 aa8.95□□□□□ -0.98
CCDC59-203ENST00000548126 IL17REQ8NFR9 667 aa8.95□□□□□ -0.98
CCDC59-203ENST00000548126 ERO1AQ96HE7 468 aa8.95□□□□□ -0.98
CCDC59-203ENST00000548126 ZNF333Q96JL9 665 aa8.95□□□□□ -0.98
CCDC59-203ENST00000548126 POP1Q99575 1024 aaKnown RBP8.95□□□□□ -0.98
CCDC59-203ENST00000548126 ELP3Q9H9T3 547 aa8.95□□□□□ -0.98
CCDC59-203ENST00000548126 A0A1W2PPC1 479 aa8.94□□□□□ -0.98
CCDC59-203ENST00000548126 SOX1O00570 391 aaPredicted RBP8.94□□□□□ -0.98
CCDC59-203ENST00000548126 DDX3YO15523 660 aaKnown RBP8.94□□□□□ -0.98
CCDC59-203ENST00000548126 BBOX1O75936 387 aa8.94□□□□□ -0.98
CCDC59-203ENST00000548126 STXBP5LQ9Y2K9 1186 aa8.94□□□□□ -0.98
CCDC59-203ENST00000548126 ASTN2O75129 1339 aaPredicted RBP8.94□□□□□ -0.98
CCDC59-203ENST00000548126 TM4SF5O14894 197 aa8.93□□□□□ -0.98
CCDC59-203ENST00000548126 KCNQ3O43525 872 aa8.93□□□□□ -0.98
CCDC59-203ENST00000548126 ADAM11O75078 769 aa8.93□□□□□ -0.98
CCDC59-203ENST00000548126 INHBEP58166 350 aa8.93□□□□□ -0.98
CCDC59-203ENST00000548126 CPSF6Q16630 551 aaKnown RBP eCLIP8.93□□□□□ -0.985e-6■■□□□ 12.1
CCDC59-203ENST00000548126 CD99L2Q8TCZ2 262 aa8.93□□□□□ -0.98
CCDC59-203ENST00000548126 PMEPA1Q969W9 287 aa8.93□□□□□ -0.98
CCDC59-203ENST00000548126 PBXIP1Q96AQ6 731 aa8.93□□□□□ -0.98
CCDC59-203ENST00000548126 C1orf115Q9H7X2 142 aa8.93□□□□□ -0.98
CCDC59-203ENST00000548126 ZMIZ1Q9ULJ6 1067 aa8.93□□□□□ -0.98
CCDC59-203ENST00000548126 ANGEL1Q9UNK9 670 aaKnown RBP8.93□□□□□ -0.98
CCDC59-203ENST00000548126 NUP98P52948 1817 aa8.92□□□□□ -0.98
CCDC59-203ENST00000548126 SIPA1L3O60292 1781 aaPredicted RBP8.92□□□□□ -0.98
CCDC59-203ENST00000548126 WTIPA6NIX2 430 aaPredicted RBP8.92□□□□□ -0.98
CCDC59-203ENST00000548126 WDR64B1ANS9 1081 aa8.92□□□□□ -0.98
CCDC59-203ENST00000548126 ERVV-1B6SEH8 477 aa8.92□□□□□ -0.98
CCDC59-203ENST00000548126 HMOX1P09601 288 aa8.92□□□□□ -0.98
CCDC59-203ENST00000548126 SNRPA1P09661 255 aaKnown RBP8.92□□□□□ -0.98
CCDC59-203ENST00000548126 CES1P23141 567 aa8.92□□□□□ -0.98
CCDC59-203ENST00000548126 PREPP48147 710 aa8.92□□□□□ -0.98
CCDC59-203ENST00000548126 TCIRG1Q13488 830 aa8.92□□□□□ -0.98
CCDC59-203ENST00000548126 SLC9C1Q4G0N8 1177 aa8.92□□□□□ -0.98
CCDC59-203ENST00000548126 FAM26DQ5JW98 314 aa8.92□□□□□ -0.98
CCDC59-203ENST00000548126 ANGEL2Q5VTE6 544 aaKnown RBP8.92□□□□□ -0.98
CCDC59-203ENST00000548126 DEFB123Q8N688 67 aa8.92□□□□□ -0.98
CCDC59-203ENST00000548126 IBTKQ9P2D0 1353 aaPredicted RBP8.91□□□□□ -0.98
CCDC59-203ENST00000548126 ABCC4O15439 1325 aa8.91□□□□□ -0.98
CCDC59-203ENST00000548126 GNAT3A8MTJ3 354 aa8.91□□□□□ -0.98
CCDC59-203ENST00000548126 EIF4EBP3O60516 100 aaPredicted RBP8.91□□□□□ -0.98
CCDC59-203ENST00000548126 CYP2E1P05181 493 aaPredicted RBP8.91□□□□□ -0.98
CCDC59-203ENST00000548126 NLRP12P59046 1061 aa8.91□□□□□ -0.98
CCDC59-203ENST00000548126 SUSD4Q5VX71 490 aa8.91□□□□□ -0.98
CCDC59-203ENST00000548126 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.91□□□□□ -0.98
CCDC59-203ENST00000548126 STK32AQ8WU08 396 aa8.91□□□□□ -0.98
CCDC59-203ENST00000548126 SLC7A3Q8WY07 619 aa8.91□□□□□ -0.98
CCDC59-203ENST00000548126 ARID3AQ99856 593 aa8.91□□□□□ -0.98
CCDC59-203ENST00000548126 DBNDD1Q9H9R9 158 aa8.91□□□□□ -0.98
CCDC59-203ENST00000548126 KCNQ5Q9NR82 932 aa8.91□□□□□ -0.98
CCDC59-203ENST00000548126 LEMD3Q9Y2U8 911 aa8.91□□□□□ -0.98
CCDC59-203ENST00000548126 NR2E3Q9Y5X4 410 aa8.91□□□□□ -0.98
CCDC59-203ENST00000548126 ZNF609O15014 1411 aa8.9□□□□□ -0.98
CCDC59-203ENST00000548126 CLSPNQ9HAW4 1339 aa8.9□□□□□ -0.98
CCDC59-203ENST00000548126 MEGF11A6BM72 1044 aa8.9□□□□□ -0.98
CCDC59-203ENST00000548126 MANSC4A6NHS7 340 aaPredicted RBP8.9□□□□□ -0.98
CCDC59-203ENST00000548126 PDE2AO00408 941 aaPredicted RBP8.9□□□□□ -0.98
CCDC59-203ENST00000548126 VIL1P09327 827 aaKnown RBP8.9□□□□□ -0.98
CCDC59-203ENST00000548126 MAP4P27816 1152 aaKnown RBP8.9□□□□□ -0.98
CCDC59-203ENST00000548126 SP3Q02447 781 aa8.9□□□□□ -0.98
CCDC59-203ENST00000548126 PTPN12Q05209 780 aaKnown RBP8.9□□□□□ -0.98
CCDC59-203ENST00000548126 PDE4CQ08493 712 aa8.9□□□□□ -0.98
CCDC59-203ENST00000548126 C19orf57Q0VDD7 668 aa8.9□□□□□ -0.98
CCDC59-203ENST00000548126 SLC10A5Q5PT55 438 aa8.9□□□□□ -0.98
CCDC59-203ENST00000548126 KANSL3Q9P2N6 904 aa8.9□□□□□ -0.98
CCDC59-203ENST00000548126 KDM3BQ7LBC6 1761 aa8.9□□□□□ -0.98
CCDC59-203ENST00000548126 RTL9Q8NET4 1388 aa8.89□□□□□ -0.99
CCDC59-203ENST00000548126 UBN2Q6ZU65 1347 aa8.89□□□□□ -0.99
CCDC59-203ENST00000548126 KRTAP4-8A0A0G2JLE6 195 aa8.89□□□□□ -0.99
CCDC59-203ENST00000548126 NTSR2O95665 410 aa8.89□□□□□ -0.99
CCDC59-203ENST00000548126 GPTP24298 496 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms