RNA–Protein interactions for RNA: ENST00000547955.5

TPCN1-210, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-210ENST00000547955 SEC63Q9UGP8 760 aaKnown RBP12.94□□□□□ -0.34
TPCN1-210ENST00000547955 SMC3Q9UQE7 1217 aa12.94□□□□□ -0.34
TPCN1-210ENST00000547955 PLXNB2O15031 1838 aa12.94□□□□□ -0.34
TPCN1-210ENST00000547955 MGAMO43451 1857 aa12.93□□□□□ -0.34
TPCN1-210ENST00000547955 VWA5AO00534 786 aa12.93□□□□□ -0.34
TPCN1-210ENST00000547955 PRPF3O43395 683 aaKnown RBP12.93□□□□□ -0.34
TPCN1-210ENST00000547955 PEX10O60683 326 aa12.93□□□□□ -0.34
TPCN1-210ENST00000547955 ZBED4O75132 1171 aa12.93□□□□□ -0.34
TPCN1-210ENST00000547955 SMARCA1P28370 1054 aa12.93□□□□□ -0.34
TPCN1-210ENST00000547955 GJB2P29033 226 aa12.93□□□□□ -0.34
TPCN1-210ENST00000547955 TAF1CQ15572 869 aaPredicted RBP12.93□□□□□ -0.34
TPCN1-210ENST00000547955 QRICH1Q2TAL8 776 aa12.93□□□□□ -0.34
TPCN1-210ENST00000547955 USH1GQ495M9 461 aa12.93□□□□□ -0.34
TPCN1-210ENST00000547955 OTUD7BQ6GQQ9 843 aa12.93□□□□□ -0.34
TPCN1-210ENST00000547955 CPXCR1Q8N123 301 aa12.93□□□□□ -0.34
TPCN1-210ENST00000547955 SMARCC2Q8TAQ2 1214 aa12.93□□□□□ -0.34
TPCN1-210ENST00000547955 SMCR8Q8TEV9 937 aaPredicted RBP12.93□□□□□ -0.34
TPCN1-210ENST00000547955 GPKOWQ92917 476 aaPredicted RBP eCLIP12.93□□□□□ -0.34
TPCN1-210ENST00000547955 AIFM3Q96NN9 605 aa12.93□□□□□ -0.34
TPCN1-210ENST00000547955 PARK7Q99497 189 aaKnown RBP12.93□□□□□ -0.34
TPCN1-210ENST00000547955 PAGR1Q9BTK6 254 aa12.93□□□□□ -0.34
TPCN1-210ENST00000547955 RNF26Q9BY78 433 aaPredicted RBP12.93□□□□□ -0.34
TPCN1-210ENST00000547955 RANBP17Q9H2T7 1088 aaKnown RBP12.93□□□□□ -0.34
TPCN1-210ENST00000547955 HOXC10Q9NYD6 342 aa12.93□□□□□ -0.34
TPCN1-210ENST00000547955 SLC45A1Q9Y2W3 748 aa12.93□□□□□ -0.34
TPCN1-210ENST00000547955 ZNFX1Q9P2E3 1918 aaKnown RBP12.93□□□□□ -0.34
TPCN1-210ENST00000547955 MYPNQ86TC9 1320 aa12.92□□□□□ -0.34
TPCN1-210ENST00000547955 STK36Q9NRP7 1315 aa12.92□□□□□ -0.34
TPCN1-210ENST00000547955 PNMA6FA0A0J9YX94 578 aa12.92□□□□□ -0.34
TPCN1-210ENST00000547955 ZBTB5O15062 677 aa12.92□□□□□ -0.34
TPCN1-210ENST00000547955 TM4SF4P48230 202 aa12.92□□□□□ -0.34
TPCN1-210ENST00000547955 PLS1Q14651 629 aa12.92□□□□□ -0.34
TPCN1-210ENST00000547955 HEATR3Q7Z4Q2 680 aa12.92□□□□□ -0.34
TPCN1-210ENST00000547955 FAM184AQ8NB25 1140 aa12.92□□□□□ -0.34
TPCN1-210ENST00000547955 COA7Q96BR5 231 aa12.92□□□□□ -0.34
TPCN1-210ENST00000547955 MTMR8Q96EF0 704 aa12.92□□□□□ -0.34
TPCN1-210ENST00000547955 SLC38A10Q9HBR0 1119 aa12.92□□□□□ -0.34
TPCN1-210ENST00000547955 RAVER2Q9HCJ3 691 aaKnown RBP12.92□□□□□ -0.34
TPCN1-210ENST00000547955 ZSWIM8A7E2V4 1837 aa12.91□□□□□ -0.34
TPCN1-210ENST00000547955 PPP1R11O60927 126 aaPredicted RBP12.91□□□□□ -0.34
TPCN1-210ENST00000547955 DEXIO95424 95 aa12.91□□□□□ -0.34
TPCN1-210ENST00000547955 SCG2P13521 617 aa12.91□□□□□ -0.34
TPCN1-210ENST00000547955 FDPSP14324 419 aaKnown RBP12.91□□□□□ -0.34
TPCN1-210ENST00000547955 HMGN5P82970 282 aaKnown RBP12.91□□□□□ -0.34
TPCN1-210ENST00000547955 PKN1Q16512 942 aa12.91□□□□□ -0.34
TPCN1-210ENST00000547955 PFKFB3Q16875 520 aaPredicted RBP12.91□□□□□ -0.34
TPCN1-210ENST00000547955 WWC2Q6AWC2 1192 aa12.91□□□□□ -0.34
TPCN1-210ENST00000547955 FBXO11Q86XK2 927 aa12.91□□□□□ -0.34
TPCN1-210ENST00000547955 ANKRD13CQ8N6S4 541 aa12.91□□□□□ -0.34
TPCN1-210ENST00000547955 JMYQ8N9B5 988 aa12.91□□□□□ -0.34
TPCN1-210ENST00000547955 INTS4Q96HW7 963 aaKnown RBP12.91□□□□□ -0.34
TPCN1-210ENST00000547955 AGBL1Q96MI9 1066 aa12.91□□□□□ -0.34
TPCN1-210ENST00000547955 CCPG1Q9ULG6 757 aa12.91□□□□□ -0.34
TPCN1-210ENST00000547955 ADAMTS5Q9UNA0 930 aa12.91□□□□□ -0.34
TPCN1-210ENST00000547955 MYH15Q9Y2K3 1946 aa12.91□□□□□ -0.34
TPCN1-210ENST00000547955 ZNF536O15090 1300 aa12.9□□□□□ -0.34
TPCN1-210ENST00000547955 CNMDO75829 334 aa12.9□□□□□ -0.34
TPCN1-210ENST00000547955 FDX1P10109 184 aa12.9□□□□□ -0.34
TPCN1-210ENST00000547955 MAP2K2P36507 400 aa12.9□□□□□ -0.34
TPCN1-210ENST00000547955 TMEM132BQ14DG7 1078 aa12.9□□□□□ -0.34
TPCN1-210ENST00000547955 POTEEQ6S8J3 1075 aa12.9□□□□□ -0.34
TPCN1-210ENST00000547955 LBX2Q6XYB7 198 aa12.9□□□□□ -0.34
TPCN1-210ENST00000547955 REM2Q8IYK8 340 aaPredicted RBP12.9□□□□□ -0.34
TPCN1-210ENST00000547955 REPS2Q8NFH8 660 aa12.9□□□□□ -0.34
TPCN1-210ENST00000547955 WASF1Q92558 559 aa12.9□□□□□ -0.34
TPCN1-210ENST00000547955 ALG1Q9BT22 464 aa12.9□□□□□ -0.34
TPCN1-210ENST00000547955 AMNQ9BXJ7 453 aa12.9□□□□□ -0.34
TPCN1-210ENST00000547955 TXNRD2Q9NNW7 524 aa12.9□□□□□ -0.34
TPCN1-210ENST00000547955 ZCCHC17Q9NP64 241 aaKnown RBP12.9□□□□□ -0.34
TPCN1-210ENST00000547955 HOMER2Q9NSB8 354 aa12.9□□□□□ -0.34
TPCN1-210ENST00000547955 VPS54Q9P1Q0 977 aa12.9□□□□□ -0.34
TPCN1-210ENST00000547955 BTBD7Q9P203 1132 aa12.9□□□□□ -0.34
TPCN1-210ENST00000547955 RBM27Q9P2N5 1060 aaKnown RBP12.9□□□□□ -0.34
TPCN1-210ENST00000547955 PCDHA1Q9Y5I3 950 aa12.9□□□□□ -0.34
TPCN1-210ENST00000547955 PLXNA1Q9UIW2 1896 aa12.9□□□□□ -0.34
TPCN1-210ENST00000547955 STXBP3O00186 592 aa12.89□□□□□ -0.35
TPCN1-210ENST00000547955 ICAM1P05362 532 aa12.89□□□□□ -0.35
TPCN1-210ENST00000547955 ALAS1P13196 640 aa12.89□□□□□ -0.35
TPCN1-210ENST00000547955 NAPAP54920 295 aa12.89□□□□□ -0.35
TPCN1-210ENST00000547955 GUCY1B3Q02153 619 aa12.89□□□□□ -0.35
TPCN1-210ENST00000547955 CRHR2Q13324 411 aa12.89□□□□□ -0.35
TPCN1-210ENST00000547955 SNRNP48Q6IEG0 339 aaKnown RBP12.89□□□□□ -0.35
TPCN1-210ENST00000547955 MB21D1Q8N884 522 aa12.89□□□□□ -0.35
TPCN1-210ENST00000547955 GTF3C2Q8WUA4 911 aaPredicted RBP12.89□□□□□ -0.35
TPCN1-210ENST00000547955 IPO9Q96P70 1041 aaKnown RBP12.89□□□□□ -0.35
TPCN1-210ENST00000547955 ZFYVE28Q9HCC9 887 aa12.89□□□□□ -0.35
TPCN1-210ENST00000547955 GJB4Q9NTQ9 266 aa12.89□□□□□ -0.35
TPCN1-210ENST00000547955 RBPJLQ9UBG7 517 aa12.89□□□□□ -0.35
TPCN1-210ENST00000547955 CPA4Q9UI42 421 aa12.89□□□□□ -0.35
TPCN1-210ENST00000547955 ZNF214Q9UL59 606 aaPredicted RBP12.89□□□□□ -0.35
TPCN1-210ENST00000547955 LCTP09848 1927 aa12.89□□□□□ -0.35
TPCN1-210ENST00000547955 ECM2O94769 699 aaPredicted RBP12.88□□□□□ -0.35
TPCN1-210ENST00000547955 ALDH1A1P00352 501 aa12.88□□□□□ -0.35
TPCN1-210ENST00000547955 STAT3P40763 770 aa12.88□□□□□ -0.35
TPCN1-210ENST00000547955 GCLCP48506 637 aaPredicted RBP12.88□□□□□ -0.35
TPCN1-210ENST00000547955 OAZ1P54368 228 aa12.88□□□□□ -0.35
TPCN1-210ENST00000547955 Q3C1V9 767 aa12.88□□□□□ -0.35
TPCN1-210ENST00000547955 TYW1BQ6NUM6 668 aa12.88□□□□□ -0.35
TPCN1-210ENST00000547955 SHISA4Q96DD7 197 aa12.88□□□□□ -0.35
TPCN1-210ENST00000547955 C8orf76Q96K31 380 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms