RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 ACVR2BQ13705 512 aa24.16■■□□□ 1.46
SSH1-207ENST00000547862 KCNA10Q16322 511 aa24.16■■□□□ 1.46
SSH1-207ENST00000547862 ANKRD45Q5TZF3 282 aa24.16■■□□□ 1.46
SSH1-207ENST00000547862 CCDC174Q6PII3 467 aa24.16■■□□□ 1.46
SSH1-207ENST00000547862 MAMDC4Q6UXC1 1216 aa24.16■■□□□ 1.46
SSH1-207ENST00000547862 KCTD1Q719H9 257 aa24.16■■□□□ 1.46
SSH1-207ENST00000547862 CHST13Q8NET6 341 aa24.16■■□□□ 1.46
SSH1-207ENST00000547862 CRBNQ96SW2 442 aa24.16■■□□□ 1.46
SSH1-207ENST00000547862 RNF146Q9NTX7 359 aa24.16■■□□□ 1.46
SSH1-207ENST00000547862 TMEM39AQ9NV64 488 aa24.16■■□□□ 1.46
SSH1-207ENST00000547862 SYNPO2Q9UMS6 1093 aa24.16■■□□□ 1.46
SSH1-207ENST00000547862 TACC3Q9Y6A5 838 aa24.16■■□□□ 1.46
SSH1-207ENST00000547862 POTEB2H3BUK9 544 aa24.15■■□□□ 1.46
SSH1-207ENST00000547862 FOXP2O15409 715 aa24.15■■□□□ 1.46
SSH1-207ENST00000547862 OAZ1P54368 228 aa24.15■■□□□ 1.46
SSH1-207ENST00000547862 CNTN2Q02246 1040 aa24.15■■□□□ 1.46
SSH1-207ENST00000547862 VPS53Q5VIR6 699 aa24.15■■□□□ 1.46
SSH1-207ENST00000547862 ZNF467Q7Z7K2 595 aaPredicted RBP24.15■■□□□ 1.46
SSH1-207ENST00000547862 NUP133Q8WUM0 1156 aa24.15■■□□□ 1.46
SSH1-207ENST00000547862 VTI1AQ96AJ9 217 aa24.15■■□□□ 1.46
SSH1-207ENST00000547862 RNPC3Q96LT9 517 aaKnown RBP24.15■■□□□ 1.46
SSH1-207ENST00000547862 AGBL1Q96MI9 1066 aa24.15■■□□□ 1.46
SSH1-207ENST00000547862 ACAD9Q9H845 621 aa24.15■■□□□ 1.46
SSH1-207ENST00000547862 TOMM22Q9NS69 142 aa24.15■■□□□ 1.46
SSH1-207ENST00000547862 RANBP6O60518 1105 aaKnown RBP24.14■■□□□ 1.45
SSH1-207ENST00000547862 ALAS1P13196 640 aa24.14■■□□□ 1.45
SSH1-207ENST00000547862 CCDC96Q2M329 555 aa24.14■■□□□ 1.45
SSH1-207ENST00000547862 CCDC144BQ3MJ40 725 aa24.14■■□□□ 1.45
SSH1-207ENST00000547862 FAM160B2Q86V87 743 aa24.14■■□□□ 1.45
SSH1-207ENST00000547862 CCDC144CPQ8IYA2 1237 aa24.14■■□□□ 1.45
SSH1-207ENST00000547862 TSEN34Q9BSV6 310 aaKnown RBP24.14■■□□□ 1.45
SSH1-207ENST00000547862 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.14■■□□□ 1.45
SSH1-207ENST00000547862 SALL3Q9BXA9 1300 aa24.13■■□□□ 1.45
SSH1-207ENST00000547862 DUSP11O75319 330 aaKnown RBP24.13■■□□□ 1.45
SSH1-207ENST00000547862 EPHB4P54760 987 aa24.13■■□□□ 1.45
SSH1-207ENST00000547862 FAM109BQ6ICB4 259 aaPredicted RBP24.13■■□□□ 1.45
SSH1-207ENST00000547862 KLHDC9Q8NEP7 349 aa24.13■■□□□ 1.45
SSH1-207ENST00000547862 CHURC1Q8WUH1 139 aa24.13■■□□□ 1.45
SSH1-207ENST00000547862 GMCL1Q96IK5 515 aa24.13■■□□□ 1.45
SSH1-207ENST00000547862 SPC25Q9HBM1 224 aa24.13■■□□□ 1.45
SSH1-207ENST00000547862 DDX49Q9Y6V7 483 aaKnown RBP24.13■■□□□ 1.45
SSH1-207ENST00000547862 MOXD2PA6NHM9 499 aa24.12■■□□□ 1.45
SSH1-207ENST00000547862 DCDC2CA8MYV0 355 aa24.12■■□□□ 1.45
SSH1-207ENST00000547862 KIAA0355O15063 1070 aa24.12■■□□□ 1.45
SSH1-207ENST00000547862 FPGSQ05932 587 aa24.12■■□□□ 1.45
SSH1-207ENST00000547862 FAAP100Q0VG06 881 aa24.12■■□□□ 1.45
SSH1-207ENST00000547862 RRP12Q5JTH9 1297 aaKnown RBP24.12■■□□□ 1.45
SSH1-207ENST00000547862 NOL8Q76FK4 1167 aaKnown RBP24.12■■□□□ 1.45
SSH1-207ENST00000547862 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.12■■□□□ 1.45
SSH1-207ENST00000547862 GLT1D1Q96MS3 346 aa24.12■■□□□ 1.45
SSH1-207ENST00000547862 ABHD16BQ9H3Z7 469 aa24.12■■□□□ 1.45
SSH1-207ENST00000547862 A1CFQ9NQ94 594 aaKnown RBP24.12■■□□□ 1.45
SSH1-207ENST00000547862 ASGR1P07306 291 aa24.11■■□□□ 1.45
SSH1-207ENST00000547862 STAG1Q8WVM7 1258 aa24.11■■□□□ 1.45
SSH1-207ENST00000547862 TRERF1Q96PN7 1200 aa24.11■■□□□ 1.45
SSH1-207ENST00000547862 IL17RBQ9NRM6 502 aa24.11■■□□□ 1.45
SSH1-207ENST00000547862 ZNF536O15090 1300 aa24.1■■□□□ 1.45
SSH1-207ENST00000547862 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.1■■□□□ 1.45
SSH1-207ENST00000547862 FDX1P10109 184 aa24.1■■□□□ 1.45
SSH1-207ENST00000547862 BEX3Q00994 111 aa24.1■■□□□ 1.45
SSH1-207ENST00000547862 PPP4R3BQ5MIZ7 849 aa24.1■■□□□ 1.45
SSH1-207ENST00000547862 EVI5LQ96CN4 794 aa24.1■■□□□ 1.45
SSH1-207ENST00000547862 CST5P28325 142 aaPredicted RBP24.09■■□□□ 1.45
SSH1-207ENST00000547862 MUM1L1Q5H9M0 696 aa24.09■■□□□ 1.45
SSH1-207ENST00000547862 GNASQ5JWF2 1037 aa24.09■■□□□ 1.45
SSH1-207ENST00000547862 CCSAPQ6IQ19 270 aaPredicted RBP24.09■■□□□ 1.45
SSH1-207ENST00000547862 ANKRD33Q7Z3H0 272 aa24.09■■□□□ 1.45
SSH1-207ENST00000547862 FAM133AQ8N9E0 248 aa24.09■■□□□ 1.45
SSH1-207ENST00000547862 PCSK9Q8NBP7 692 aaKnown RBP24.09■■□□□ 1.45
SSH1-207ENST00000547862 FAM227BQ96M60 508 aa24.09■■□□□ 1.45
SSH1-207ENST00000547862 CCPG1Q9ULG6 757 aa24.09■■□□□ 1.45
SSH1-207ENST00000547862 PRR12Q9ULL5 1215 aa24.09■■□□□ 1.45
SSH1-207ENST00000547862 UNC80Q8N2C7 3258 aa24.08■■□□□ 1.45
SSH1-207ENST00000547862 A0A0D9SFI3 127 aa24.08■■□□□ 1.45
SSH1-207ENST00000547862 SOWAHBA6NEL2 793 aa24.08■■□□□ 1.45
SSH1-207ENST00000547862 PTGS1P23219 599 aa24.08■■□□□ 1.45
SSH1-207ENST00000547862 GJA9P57773 515 aa24.08■■□□□ 1.45
SSH1-207ENST00000547862 SMAD3P84022 425 aaKnown RBP24.08■■□□□ 1.45
SSH1-207ENST00000547862 RCSD1Q6JBY9 416 aa24.08■■□□□ 1.45
SSH1-207ENST00000547862 NSMFQ6X4W1 530 aa24.08■■□□□ 1.45
SSH1-207ENST00000547862 EEPD1Q7L9B9 569 aa24.08■■□□□ 1.45
SSH1-207ENST00000547862 MYLIPQ8WY64 445 aa24.08■■□□□ 1.45
SSH1-207ENST00000547862 CDX2Q99626 313 aaPredicted RBP24.08■■□□□ 1.45
SSH1-207ENST00000547862 PPP1R12CQ9BZL4 782 aa24.08■■□□□ 1.45
SSH1-207ENST00000547862 KATNBL1Q9H079 304 aa24.08■■□□□ 1.45
SSH1-207ENST00000547862 UPF3AQ9H1J1 476 aaKnown RBP24.08■■□□□ 1.45
SSH1-207ENST00000547862 MROH7Q68CQ1 1323 aa24.08■■□□□ 1.44
SSH1-207ENST00000547862 FRMPD2Q68DX3 1309 aaPredicted RBP24.08■■□□□ 1.44
SSH1-207ENST00000547862 A0A0U1RQG5 324 aaPredicted RBP24.07■■□□□ 1.44
SSH1-207ENST00000547862 PDE1AP54750 535 aa24.07■■□□□ 1.44
SSH1-207ENST00000547862 TNFAIP2Q03169 654 aa24.07■■□□□ 1.44
SSH1-207ENST00000547862 FBXO16Q8IX29 292 aaPredicted RBP24.07■■□□□ 1.44
SSH1-207ENST00000547862 TTYH1Q9H313 450 aaPredicted RBP24.07■■□□□ 1.44
SSH1-207ENST00000547862 LAMA4Q16363 1823 aa24.07■■□□□ 1.44
SSH1-207ENST00000547862 EYSQ5T1H1 3165 aa24.07■■□□□ 1.44
SSH1-207ENST00000547862 A0A0C4DFX4 3053 aa24.06■■□□□ 1.44
SSH1-207ENST00000547862 SLC16A2P36021 539 aa24.06■■□□□ 1.44
SSH1-207ENST00000547862 HAND2P61296 217 aa24.06■■□□□ 1.44
SSH1-207ENST00000547862 TKFCQ3LXA3 575 aa24.06■■□□□ 1.44
SSH1-207ENST00000547862 TLK2Q86UE8 772 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms