RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 NDUFA8P51970 172 aa18.98■□□□□ 0.63
CHMP1A-204ENST00000547687 PLCB2Q00722 1185 aa18.98■□□□□ 0.63
CHMP1A-204ENST00000547687 CBX8Q9HC52 389 aa18.98■□□□□ 0.63
CHMP1A-204ENST00000547687 BAZ2BQ9UIF8 2168 aaKnown RBP18.98■□□□□ 0.63
CHMP1A-204ENST00000547687 PTPRFP10586 1907 aa18.97■□□□□ 0.63
CHMP1A-204ENST00000547687 FUT2Q10981 343 aa18.97■□□□□ 0.63
CHMP1A-204ENST00000547687 DGKZQ13574 1117 aa18.97■□□□□ 0.63
CHMP1A-204ENST00000547687 RNF26Q9BY78 433 aaPredicted RBP18.97■□□□□ 0.63
CHMP1A-204ENST00000547687 KCNJ14Q9UNX9 436 aa18.97■□□□□ 0.63
CHMP1A-204ENST00000547687 CAVIN2O95810 425 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 GTF2A2P52657 109 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 INHBEP58166 350 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 AKAP17AQ02040 695 aaKnown RBP18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 CRHR2Q13324 411 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 AXDND1Q5T1B0 1012 aaPredicted RBP18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 TMTC3Q6ZXV5 915 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 LUZP1Q86V48 1076 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 NOSTRINQ8IVI9 506 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 MAP3K14Q99558 947 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 MCOLN1Q9GZU1 580 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 PLIN4Q96Q06 1357 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 BTBD18B2RXH4 712 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 GPR25O00155 361 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 AP5Z1O43299 807 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 PPP6R2O75170 966 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 CMA1P23946 247 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 MARCKSP29966 332 aaPredicted RBP18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 PPIL2Q13356 520 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 RRP1BQ14684 758 aaKnown RBP18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 DIS3L2Q8IYB7 885 aaKnown RBP18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 DNAJC25Q9H1X3 360 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 MTMR7Q9Y216 660 aa18.96■□□□□ 0.63
CHMP1A-204ENST00000547687 NOVP48745 357 aa18.95■□□□□ 0.62
CHMP1A-204ENST00000547687 ZNF165P49910 485 aa18.95■□□□□ 0.62
CHMP1A-204ENST00000547687 PTPAQ15257 358 aa18.95■□□□□ 0.62
CHMP1A-204ENST00000547687 SRBD1Q8N5C6 995 aaKnown RBP18.95■□□□□ 0.62
CHMP1A-204ENST00000547687 SDF4Q9BRK5 362 aa18.95■□□□□ 0.62
CHMP1A-204ENST00000547687 FOXP1Q9H334 677 aaPredicted RBP18.95■□□□□ 0.62
CHMP1A-204ENST00000547687 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.95■□□□□ 0.62
CHMP1A-204ENST00000547687 ZKSCAN5Q9Y2L8 839 aa18.95■□□□□ 0.62
CHMP1A-204ENST00000547687 TESPA1A2RU30 521 aaPredicted RBP18.95■□□□□ 0.62
CHMP1A-204ENST00000547687 PPATQ06203 517 aa18.95■□□□□ 0.62
CHMP1A-204ENST00000547687 FOXP4Q8IVH2 680 aaPredicted RBP18.95■□□□□ 0.62
CHMP1A-204ENST00000547687 MTMR4Q9NYA4 1195 aa18.95■□□□□ 0.62
CHMP1A-204ENST00000547687 V9GY48 417 aaPredicted RBP18.95■□□□□ 0.62
CHMP1A-204ENST00000547687 IGKV6D-41A0A0C4DH26 115 aa18.94■□□□□ 0.62
CHMP1A-204ENST00000547687 hCG_1642624A0A1W2PR95 340 aa18.94■□□□□ 0.62
CHMP1A-204ENST00000547687 PRPF3O43395 683 aaKnown RBP18.94■□□□□ 0.62
CHMP1A-204ENST00000547687 KIF5BP33176 963 aa18.94■□□□□ 0.62
CHMP1A-204ENST00000547687 MAP3K10Q02779 954 aa18.94■□□□□ 0.62
CHMP1A-204ENST00000547687 STX1AQ16623 288 aa18.94■□□□□ 0.62
CHMP1A-204ENST00000547687 SHROOM1Q2M3G4 852 aaPredicted RBP18.94■□□□□ 0.62
CHMP1A-204ENST00000547687 NOL9Q5SY16 702 aaKnown RBP18.94■□□□□ 0.62
CHMP1A-204ENST00000547687 CLEC10AQ8IUN9 316 aa18.94■□□□□ 0.62
CHMP1A-204ENST00000547687 SCYL3Q8IZE3 742 aa18.94■□□□□ 0.62
CHMP1A-204ENST00000547687 STAG2Q8N3U4 1231 aa18.94■□□□□ 0.62
CHMP1A-204ENST00000547687 ABHD8Q96I13 439 aa18.94■□□□□ 0.62
CHMP1A-204ENST00000547687 ZHX2Q9Y6X8 837 aa18.94■□□□□ 0.62
CHMP1A-204ENST00000547687 ZSWIM8A7E2V4 1837 aa18.94■□□□□ 0.62
CHMP1A-204ENST00000547687 CNTNAP5Q8WYK1 1306 aa18.93■□□□□ 0.62
CHMP1A-204ENST00000547687 BTBD19C9JJ37 291 aa18.93■□□□□ 0.62
CHMP1A-204ENST00000547687 MPHOSPH10O00566 681 aaKnown RBP18.93■□□□□ 0.62
CHMP1A-204ENST00000547687 ALDH1A1P00352 501 aa18.93■□□□□ 0.62
CHMP1A-204ENST00000547687 TOP1P11387 765 aaKnown RBP18.93■□□□□ 0.62
CHMP1A-204ENST00000547687 PTPRAP18433 802 aa18.93■□□□□ 0.62
CHMP1A-204ENST00000547687 SNAPC2Q13487 334 aa18.93■□□□□ 0.62
CHMP1A-204ENST00000547687 GRM4Q14833 912 aa18.93■□□□□ 0.62
CHMP1A-204ENST00000547687 PKN1Q16512 942 aa18.93■□□□□ 0.62
CHMP1A-204ENST00000547687 TRIM34Q9BYJ4 488 aa18.93■□□□□ 0.62
CHMP1A-204ENST00000547687 PICK1Q9NRD5 415 aa18.93■□□□□ 0.62
CHMP1A-204ENST00000547687 MAD2L2Q9UI95 211 aa18.93■□□□□ 0.62
CHMP1A-204ENST00000547687 ZNF202O95125 648 aa18.93■□□□□ 0.62
CHMP1A-204ENST00000547687 XBP1P17861 261 aa18.93■□□□□ 0.62
CHMP1A-204ENST00000547687 RASGRP2Q7LDG7 609 aa18.93■□□□□ 0.62
CHMP1A-204ENST00000547687 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.93■□□□□ 0.62
CHMP1A-204ENST00000547687 GREB1LQ9C091 1923 aaPredicted RBP18.92■□□□□ 0.62
CHMP1A-204ENST00000547687 COL2A1P02458 1487 aaPredicted RBP18.92■□□□□ 0.62
CHMP1A-204ENST00000547687 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.92■□□□□ 0.62
CHMP1A-204ENST00000547687 CETPP11597 493 aa18.92■□□□□ 0.62
CHMP1A-204ENST00000547687 PFKFB1P16118 471 aa18.92■□□□□ 0.62
CHMP1A-204ENST00000547687 TAF1CQ15572 869 aaPredicted RBP18.92■□□□□ 0.62
CHMP1A-204ENST00000547687 CERKLQ49MI3 558 aaPredicted RBP18.92■□□□□ 0.62
CHMP1A-204ENST00000547687 TATDN1Q6P1N9 297 aa18.92■□□□□ 0.62
CHMP1A-204ENST00000547687 METTL16Q86W50 562 aaKnown RBP18.92■□□□□ 0.62
CHMP1A-204ENST00000547687 CCDC17Q96LX7 622 aa18.92■□□□□ 0.62
CHMP1A-204ENST00000547687 CTNND1O60716 968 aaKnown RBP18.91■□□□□ 0.62
CHMP1A-204ENST00000547687 ECM2O94769 699 aaPredicted RBP18.91■□□□□ 0.62
CHMP1A-204ENST00000547687 ANO10Q9NW15 660 aa18.91■□□□□ 0.62
CHMP1A-204ENST00000547687 CLIP2Q9UDT6 1046 aa18.91■□□□□ 0.62
CHMP1A-204ENST00000547687 TRIM75PA6NK02 468 aa18.91■□□□□ 0.62
CHMP1A-204ENST00000547687 TBC1D12O60347 775 aa18.91■□□□□ 0.62
CHMP1A-204ENST00000547687 TOB1P50616 345 aaPredicted RBP18.91■□□□□ 0.62
CHMP1A-204ENST00000547687 JAG1P78504 1218 aa18.91■□□□□ 0.62
CHMP1A-204ENST00000547687 CAP1Q01518 475 aa18.91■□□□□ 0.62
CHMP1A-204ENST00000547687 RILPL1Q5EBL4 403 aa18.91■□□□□ 0.62
CHMP1A-204ENST00000547687 CFHR5Q9BXR6 569 aa18.91■□□□□ 0.62
CHMP1A-204ENST00000547687 PALM3A6NDB9 673 aaPredicted RBP18.9■□□□□ 0.62
CHMP1A-204ENST00000547687 CUTAO60888 179 aa18.9■□□□□ 0.62
CHMP1A-204ENST00000547687 FKTNO75072 461 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms