RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 YBX1P67809 324 aaKnown RBP4.97□□□□□ -1.61
HCFC2-203ENST00000547194 ZFYVE27Q5T4F4 411 aa4.97□□□□□ -1.61
HCFC2-203ENST00000547194 PHACTR4Q8IZ21 702 aa4.97□□□□□ -1.61
HCFC2-203ENST00000547194 RNF141Q8WVD5 230 aa4.97□□□□□ -1.61
HCFC2-203ENST00000547194 LOXL4Q96JB6 756 aa4.97□□□□□ -1.61
HCFC2-203ENST00000547194 KREMEN1Q96MU8 473 aa4.97□□□□□ -1.61
HCFC2-203ENST00000547194 KIF2CQ99661 725 aa4.97□□□□□ -1.61
HCFC2-203ENST00000547194 CRTAC1Q9NQ79 661 aa4.97□□□□□ -1.61
HCFC2-203ENST00000547194 ADAMTS1Q9UHI8 967 aa4.97□□□□□ -1.61
HCFC2-203ENST00000547194 SSU72P8A0A1W2PR75 194 aa4.96□□□□□ -1.62
HCFC2-203ENST00000547194 ABLIM1O14639 778 aa4.96□□□□□ -1.62
HCFC2-203ENST00000547194 PNLIPP16233 465 aa4.96□□□□□ -1.62
HCFC2-203ENST00000547194 RBM25P49756 843 aaKnown RBP4.96□□□□□ -1.62
HCFC2-203ENST00000547194 ZPBP2Q6X784 338 aa4.96□□□□□ -1.62
HCFC2-203ENST00000547194 METTL16Q86W50 562 aaKnown RBP4.96□□□□□ -1.62
HCFC2-203ENST00000547194 MAP6Q96JE9 813 aa4.96□□□□□ -1.62
HCFC2-203ENST00000547194 C8orf49Q96NF6 230 aa4.96□□□□□ -1.62
HCFC2-203ENST00000547194 ASPNQ9BXN1 380 aa4.96□□□□□ -1.62
HCFC2-203ENST00000547194 FOXP3Q9BZS1 431 aa4.96□□□□□ -1.62
HCFC2-203ENST00000547194 EHMT1Q9H9B1 1298 aa4.96□□□□□ -1.62
HCFC2-203ENST00000547194 BRMS1Q9HCU9 246 aa4.96□□□□□ -1.62
HCFC2-203ENST00000547194 SUSD2Q9UGT4 822 aa4.96□□□□□ -1.62
HCFC2-203ENST00000547194 PCDHB14Q9Y5E9 798 aa4.96□□□□□ -1.62
HCFC2-203ENST00000547194 DUSP10Q9Y6W6 482 aa4.96□□□□□ -1.62
HCFC2-203ENST00000547194 CRKP46108 304 aa4.95□□□□□ -1.62
HCFC2-203ENST00000547194 APOBRQ0VD83 1088 aa4.95□□□□□ -1.62
HCFC2-203ENST00000547194 REXO1Q8N1G1 1221 aaKnown RBP4.95□□□□□ -1.62
HCFC2-203ENST00000547194 RNF34Q969K3 372 aa4.95□□□□□ -1.62
HCFC2-203ENST00000547194 HHIPL1Q96JK4 782 aa4.95□□□□□ -1.62
HCFC2-203ENST00000547194 NT5C1AQ9BXI3 368 aa4.95□□□□□ -1.62
HCFC2-203ENST00000547194 GMIPQ9P107 970 aa4.95□□□□□ -1.62
HCFC2-203ENST00000547194 CNOT11Q9UKZ1 510 aaKnown RBP4.95□□□□□ -1.62
HCFC2-203ENST00000547194 PCDHA5Q9Y5H7 936 aa4.95□□□□□ -1.62
HCFC2-203ENST00000547194 RGS13O14921 159 aa4.94□□□□□ -1.62
HCFC2-203ENST00000547194 GBP1P32455 592 aa4.94□□□□□ -1.62
HCFC2-203ENST00000547194 RTP1P59025 263 aa4.94□□□□□ -1.62
HCFC2-203ENST00000547194 ZNF200P98182 395 aaPredicted RBP4.94□□□□□ -1.62
HCFC2-203ENST00000547194 HDLBPQ00341 1268 aaKnown RBP4.94□□□□□ -1.62
HCFC2-203ENST00000547194 SEZ6Q53EL9 994 aa4.94□□□□□ -1.62
HCFC2-203ENST00000547194 ARSHQ5FYA8 562 aa4.94□□□□□ -1.62
HCFC2-203ENST00000547194 CPZQ66K79 652 aa4.94□□□□□ -1.62
HCFC2-203ENST00000547194 NLGN1Q8N2Q7 840 aa4.94□□□□□ -1.62
HCFC2-203ENST00000547194 SLITRK6Q9H5Y7 841 aa4.94□□□□□ -1.62
HCFC2-203ENST00000547194 UBP1Q9NZI7 540 aa4.94□□□□□ -1.62
HCFC2-203ENST00000547194 RAG1P15918 1043 aa4.93□□□□□ -1.62
HCFC2-203ENST00000547194 ZNF20P17024 532 aa4.93□□□□□ -1.62
HCFC2-203ENST00000547194 TACR2P21452 398 aa4.93□□□□□ -1.62
HCFC2-203ENST00000547194 POLR2BP30876 1174 aaKnown RBP4.93□□□□□ -1.62
HCFC2-203ENST00000547194 ARL4AP40617 200 aa4.93□□□□□ -1.62
HCFC2-203ENST00000547194 ZNF165P49910 485 aa4.93□□□□□ -1.62
HCFC2-203ENST00000547194 CHMP4BP1P59074 171 aa4.93□□□□□ -1.62
HCFC2-203ENST00000547194 ERVFRD-1P60508 538 aa4.93□□□□□ -1.62
HCFC2-203ENST00000547194 ZNF394Q53GI3 561 aa4.93□□□□□ -1.62
HCFC2-203ENST00000547194 CDCP2Q5VXM1 449 aa4.93□□□□□ -1.62
HCFC2-203ENST00000547194 LIPIQ6XZB0 460 aa4.93□□□□□ -1.62
HCFC2-203ENST00000547194 KIAA0825Q8IV33 1275 aa4.93□□□□□ -1.62
HCFC2-203ENST00000547194 SLITRK4Q8IW52 837 aa4.93□□□□□ -1.62
HCFC2-203ENST00000547194 SPON2Q9BUD6 331 aa4.93□□□□□ -1.62
HCFC2-203ENST00000547194 PRDM14Q9GZV8 571 aa4.93□□□□□ -1.62
HCFC2-203ENST00000547194 ASCC2Q9H1I8 757 aaPredicted RBP4.93□□□□□ -1.62
HCFC2-203ENST00000547194 IGSF5Q9NSI5 407 aa4.93□□□□□ -1.62
HCFC2-203ENST00000547194 DDX41Q9UJV9 622 aaKnown RBP4.93□□□□□ -1.62
HCFC2-203ENST00000547194 TAF6LQ9Y6J9 622 aa4.93□□□□□ -1.62
HCFC2-203ENST00000547194 UBOX5O94941 541 aa4.92□□□□□ -1.62
HCFC2-203ENST00000547194 ITGB3P05106 788 aa4.92□□□□□ -1.62
HCFC2-203ENST00000547194 HMGB1P09429 215 aaKnown RBP4.92□□□□□ -1.62
HCFC2-203ENST00000547194 PFKLP17858 780 aa4.92□□□□□ -1.62
HCFC2-203ENST00000547194 MCM4P33991 863 aa4.92□□□□□ -1.62
HCFC2-203ENST00000547194 KIR2DL1P43626 348 aaPredicted RBP4.92□□□□□ -1.62
HCFC2-203ENST00000547194 KIR2DL2P43627 348 aaPredicted RBP4.92□□□□□ -1.62
HCFC2-203ENST00000547194 RACK1P63244 317 aaKnown RBP4.92□□□□□ -1.62
HCFC2-203ENST00000547194 RNF4P78317 190 aa4.92□□□□□ -1.62
HCFC2-203ENST00000547194 CLCQ05315 142 aa4.92□□□□□ -1.62
HCFC2-203ENST00000547194 RAD51AP2Q09MP3 1159 aa4.92□□□□□ -1.62
HCFC2-203ENST00000547194 SNW1Q13573 536 aaKnown RBP4.92□□□□□ -1.62
HCFC2-203ENST00000547194 LRRFIP1Q32MZ4 808 aaKnown RBP4.92□□□□□ -1.62
HCFC2-203ENST00000547194 OVOS1Q6IE37 1185 aa4.92□□□□□ -1.62
HCFC2-203ENST00000547194 RNF111Q6ZNA4 994 aa4.92□□□□□ -1.62
HCFC2-203ENST00000547194 SPRED1Q7Z699 444 aa4.92□□□□□ -1.62
HCFC2-203ENST00000547194 USP48Q86UV5 1035 aa4.92□□□□□ -1.62
HCFC2-203ENST00000547194 NT5DC4Q86YG4 428 aa4.92□□□□□ -1.62
HCFC2-203ENST00000547194 SH3RF3Q8TEJ3 882 aaPredicted RBP4.92□□□□□ -1.62
HCFC2-203ENST00000547194 NKD1Q969G9 470 aa4.92□□□□□ -1.62
HCFC2-203ENST00000547194 EAF1Q96JC9 268 aaPredicted RBP4.92□□□□□ -1.62
HCFC2-203ENST00000547194 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.92□□□□□ -1.62
HCFC2-203ENST00000547194 CNNM2Q9H8M5 875 aa4.92□□□□□ -1.62
HCFC2-203ENST00000547194 TCFL5Q9UL49 500 aa4.92□□□□□ -1.62
HCFC2-203ENST00000547194 PCDHGB7Q9Y5F8 929 aa4.92□□□□□ -1.62
HCFC2-203ENST00000547194 MEIS3P2A8K0S8 358 aa4.91□□□□□ -1.62
HCFC2-203ENST00000547194 E9PSI1 815 aa4.91□□□□□ -1.62
HCFC2-203ENST00000547194 PLA2G1BP04054 148 aaKnown RBP4.91□□□□□ -1.62
HCFC2-203ENST00000547194 TCF3P15923 654 aa4.91□□□□□ -1.62
HCFC2-203ENST00000547194 PRKCAP17252 672 aa4.91□□□□□ -1.62
HCFC2-203ENST00000547194 CCNFP41002 786 aa4.91□□□□□ -1.62
HCFC2-203ENST00000547194 TMEM62Q0P6H9 643 aa4.91□□□□□ -1.62
HCFC2-203ENST00000547194 VWA3BQ502W6 1294 aa4.91□□□□□ -1.62
HCFC2-203ENST00000547194 C9orf131Q5VYM1 1079 aa4.91□□□□□ -1.62
HCFC2-203ENST00000547194 RPTNQ6XPR3 784 aa4.91□□□□□ -1.62
HCFC2-203ENST00000547194 GK5Q6ZS86 529 aa4.91□□□□□ -1.62
HCFC2-203ENST00000547194 TMC3Q7Z5M5 1100 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms