RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 CERS4Q9HA82 394 aa11.16□□□□□ -0.62
SSH1-205ENST00000546812 GOPCQ9HD26 462 aa11.16□□□□□ -0.62
SSH1-205ENST00000546812 RIPK3Q9Y572 518 aa11.16□□□□□ -0.62
SSH1-205ENST00000546812 GRIN2DO15399 1336 aa11.15□□□□□ -0.62
SSH1-205ENST00000546812 PRR33A8MZF0 331 aa11.15□□□□□ -0.62
SSH1-205ENST00000546812 PFKMP08237 780 aa11.15□□□□□ -0.62
SSH1-205ENST00000546812 BEX3Q00994 111 aa11.15□□□□□ -0.62
SSH1-205ENST00000546812 TTLL4Q14679 1199 aa11.15□□□□□ -0.62
SSH1-205ENST00000546812 SLC9C2Q5TAH2 1124 aa11.15□□□□□ -0.62
SSH1-205ENST00000546812 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.15□□□□□ -0.62
SSH1-205ENST00000546812 ARMCX2Q7L311 632 aa11.15□□□□□ -0.62
SSH1-205ENST00000546812 SDR42E1Q8WUS8 393 aa11.15□□□□□ -0.62
SSH1-205ENST00000546812 SNX27Q96L92 541 aa11.15□□□□□ -0.62
SSH1-205ENST00000546812 FGD4Q96M96 766 aa11.15□□□□□ -0.62
SSH1-205ENST00000546812 AGBL1Q96MI9 1066 aa11.15□□□□□ -0.62
SSH1-205ENST00000546812 KATNBL1Q9H079 304 aa11.15□□□□□ -0.62
SSH1-205ENST00000546812 CD320Q9NPF0 282 aa11.15□□□□□ -0.62
SSH1-205ENST00000546812 NOP58Q9Y2X3 529 aaKnown RBP11.15□□□□□ -0.62
SSH1-205ENST00000546812 ATP2A1O14983 1001 aa11.14□□□□□ -0.63
SSH1-205ENST00000546812 RAD21O60216 631 aa11.14□□□□□ -0.63
SSH1-205ENST00000546812 B4GALT4O60513 344 aa11.14□□□□□ -0.63
SSH1-205ENST00000546812 PDE6AP16499 860 aa11.14□□□□□ -0.63
SSH1-205ENST00000546812 MRE11P49959 708 aa11.14□□□□□ -0.63
SSH1-205ENST00000546812 ATP8B2P98198 1209 aa11.14□□□□□ -0.63
SSH1-205ENST00000546812 TNFAIP2Q03169 654 aa11.14□□□□□ -0.63
SSH1-205ENST00000546812 TAP1Q03518 808 aa11.14□□□□□ -0.63
SSH1-205ENST00000546812 CCDC144CPQ8IYA2 1237 aa11.14□□□□□ -0.63
SSH1-205ENST00000546812 ANKRD35Q8N283 1001 aa11.14□□□□□ -0.63
SSH1-205ENST00000546812 ARNTL2Q8WYA1 636 aa11.14□□□□□ -0.63
SSH1-205ENST00000546812 SCLYQ96I15 445 aa11.14□□□□□ -0.63
SSH1-205ENST00000546812 SLF1Q9BQI6 1058 aa11.14□□□□□ -0.63
SSH1-205ENST00000546812 WDFY4Q6ZS81 3184 aa11.14□□□□□ -0.63
SSH1-205ENST00000546812 ZNFX1Q9P2E3 1918 aaKnown RBP11.13□□□□□ -0.63
SSH1-205ENST00000546812 ASTN1O14525 1302 aa11.13□□□□□ -0.63
SSH1-205ENST00000546812 IPO8O15397 1037 aaKnown RBP11.13□□□□□ -0.63
SSH1-205ENST00000546812 ZEB2O60315 1214 aa11.13□□□□□ -0.63
SSH1-205ENST00000546812 BCAR3O75815 825 aa11.13□□□□□ -0.63
SSH1-205ENST00000546812 TRIM27P14373 513 aa11.13□□□□□ -0.63
SSH1-205ENST00000546812 CDK8P49336 464 aa11.13□□□□□ -0.63
SSH1-205ENST00000546812 TTF1Q15361 905 aaPredicted RBP11.13□□□□□ -0.63
SSH1-205ENST00000546812 FSCN1Q16658 493 aaKnown RBP11.13□□□□□ -0.63
SSH1-205ENST00000546812 NOL8Q76FK4 1167 aaKnown RBP11.13□□□□□ -0.63
SSH1-205ENST00000546812 LCORLQ8N3X6 602 aa11.13□□□□□ -0.63
SSH1-205ENST00000546812 PRPF38AQ8NAV1 312 aaKnown RBP11.13□□□□□ -0.63
SSH1-205ENST00000546812 PHOSPHO2Q8TCD6 241 aa11.13□□□□□ -0.63
SSH1-205ENST00000546812 GNEQ9Y223 722 aaKnown RBP11.13□□□□□ -0.63
SSH1-205ENST00000546812 ZNF532Q9HCE3 1301 aa11.12□□□□□ -0.63
SSH1-205ENST00000546812 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.12□□□□□ -0.63
SSH1-205ENST00000546812 TCRBV5S4A2TA0A5A2 114 aa11.12□□□□□ -0.63
SSH1-205ENST00000546812 ZBED4O75132 1171 aa11.12□□□□□ -0.63
SSH1-205ENST00000546812 SLC4A3P48751 1232 aa11.12□□□□□ -0.63
SSH1-205ENST00000546812 GRB10Q13322 594 aa11.12□□□□□ -0.63
SSH1-205ENST00000546812 C12orf60Q5U649 245 aa11.12□□□□□ -0.63
SSH1-205ENST00000546812 C16orf86Q6ZW13 317 aa11.12□□□□□ -0.63
SSH1-205ENST00000546812 TLK2Q86UE8 772 aa11.12□□□□□ -0.63
SSH1-205ENST00000546812 CPXCR1Q8N123 301 aa11.12□□□□□ -0.63
SSH1-205ENST00000546812 GJD3Q8N144 294 aa11.12□□□□□ -0.63
SSH1-205ENST00000546812 CHST13Q8NET6 341 aa11.12□□□□□ -0.63
SSH1-205ENST00000546812 SLC9A7Q96T83 725 aa11.12□□□□□ -0.63
SSH1-205ENST00000546812 NUP88Q99567 741 aaPredicted RBP11.12□□□□□ -0.63
SSH1-205ENST00000546812 AP5M1Q9H0R1 490 aa11.12□□□□□ -0.63
SSH1-205ENST00000546812 ATP8A2Q9NTI2 1148 aa11.12□□□□□ -0.63
SSH1-205ENST00000546812 FBXO40Q9UH90 709 aa11.12□□□□□ -0.63
SSH1-205ENST00000546812 RCAN3Q9UKA8 241 aa11.12□□□□□ -0.63
SSH1-205ENST00000546812 KIF28PB7ZC32 967 aa11.11□□□□□ -0.63
SSH1-205ENST00000546812 DYNC1LI2O43237 492 aaPredicted RBP11.11□□□□□ -0.63
SSH1-205ENST00000546812 PRKAB2O43741 272 aa11.11□□□□□ -0.63
SSH1-205ENST00000546812 LPXNO60711 386 aa11.11□□□□□ -0.63
SSH1-205ENST00000546812 ARHGEF15O94989 841 aa11.11□□□□□ -0.63
SSH1-205ENST00000546812 SUPT20HL2P0C7V6 817 aa11.11□□□□□ -0.63
SSH1-205ENST00000546812 ACTN1P12814 892 aa11.11□□□□□ -0.63
SSH1-205ENST00000546812 PSMC6P62333 389 aa11.11□□□□□ -0.63
SSH1-205ENST00000546812 NHLH1Q02575 133 aa11.11□□□□□ -0.63
SSH1-205ENST00000546812 DEFB128Q7Z7B8 93 aa11.11□□□□□ -0.63
SSH1-205ENST00000546812 HERC6Q8IVU3 1022 aa11.11□□□□□ -0.63
SSH1-205ENST00000546812 UIMC1Q96RL1 719 aa11.11□□□□□ -0.63
SSH1-205ENST00000546812 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.11□□□□□ -0.63
SSH1-205ENST00000546812 ALDH8A1Q9H2A2 487 aaPredicted RBP11.11□□□□□ -0.63
SSH1-205ENST00000546812 ARMT1Q9H993 441 aa11.11□□□□□ -0.63
SSH1-205ENST00000546812 SLC38A10Q9HBR0 1119 aa11.11□□□□□ -0.63
SSH1-205ENST00000546812 RAVER2Q9HCJ3 691 aaKnown RBP11.11□□□□□ -0.63
SSH1-205ENST00000546812 LMCD1Q9NZU5 365 aa11.11□□□□□ -0.63
SSH1-205ENST00000546812 Q9Y3F1 56 aa11.11□□□□□ -0.63
SSH1-205ENST00000546812 CTDP1Q9Y5B0 961 aaPredicted RBP11.11□□□□□ -0.63
SSH1-205ENST00000546812 MYO5AQ9Y4I1 1855 aaKnown RBP11.1□□□□□ -0.63
SSH1-205ENST00000546812 CYP2D7A0A087X1C5 515 aa11.1□□□□□ -0.63
SSH1-205ENST00000546812 USP17L12C9JPN9 530 aa11.1□□□□□ -0.63
SSH1-205ENST00000546812 USP17L21D6R901 530 aa11.1□□□□□ -0.63
SSH1-205ENST00000546812 F5H6K3 240 aa11.1□□□□□ -0.63
SSH1-205ENST00000546812 CYP2C9P11712 490 aa11.1□□□□□ -0.63
SSH1-205ENST00000546812 ALADP13716 330 aa11.1□□□□□ -0.63
SSH1-205ENST00000546812 SMPD1P17405 629 aa11.1□□□□□ -0.63
SSH1-205ENST00000546812 RFC2P35250 354 aa11.1□□□□□ -0.63
SSH1-205ENST00000546812 CNTN2Q02246 1040 aa11.1□□□□□ -0.63
SSH1-205ENST00000546812 KLRC3Q07444 240 aa11.1□□□□□ -0.63
SSH1-205ENST00000546812 FAM178BQ8IXR5 827 aa11.1□□□□□ -0.63
SSH1-205ENST00000546812 AMOTL1Q8IY63 956 aa11.1□□□□□ -0.63
SSH1-205ENST00000546812 FAM133AQ8N9E0 248 aa11.1□□□□□ -0.63
SSH1-205ENST00000546812 FRAT1Q92837 279 aaPredicted RBP11.1□□□□□ -0.63
SSH1-205ENST00000546812 CLUAP1Q96AJ1 413 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms