RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 AKR1B1P15121 316 aa13.09□□□□□ -0.31
TMEM116-203ENST00000546537 CSPP1Q1MSJ5 1256 aa13.09□□□□□ -0.31
TMEM116-203ENST00000546537 PHOSPHO2Q8TCD6 241 aa13.09□□□□□ -0.31
TMEM116-203ENST00000546537 FGD4Q96M96 766 aa13.09□□□□□ -0.31
TMEM116-203ENST00000546537 SLC9A7Q96T83 725 aa13.09□□□□□ -0.31
TMEM116-203ENST00000546537 TEX13BQ9BXU2 312 aa13.09□□□□□ -0.31
TMEM116-203ENST00000546537 KATNBL1Q9H079 304 aa13.09□□□□□ -0.31
TMEM116-203ENST00000546537 MCM9Q9NXL9 1143 aa13.09□□□□□ -0.31
TMEM116-203ENST00000546537 LMCD1Q9NZU5 365 aa13.09□□□□□ -0.31
TMEM116-203ENST00000546537 SWAP70Q9UH65 585 aa13.09□□□□□ -0.31
TMEM116-203ENST00000546537 RIPK3Q9Y572 518 aa13.09□□□□□ -0.31
TMEM116-203ENST00000546537 ASTN1O14525 1302 aa13.09□□□□□ -0.31
TMEM116-203ENST00000546537 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.08□□□□□ -0.32
TMEM116-203ENST00000546537 SNRNP48Q6IEG0 339 aaKnown RBP13.08□□□□□ -0.32
TMEM116-203ENST00000546537 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.07□□□□□ -0.32
TMEM116-203ENST00000546537 ACTN1P12814 892 aa13.07□□□□□ -0.32
TMEM116-203ENST00000546537 EEF2P13639 858 aaKnown RBP13.07□□□□□ -0.32
TMEM116-203ENST00000546537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.07□□□□□ -0.32
TMEM116-203ENST00000546537 ARMCX2Q7L311 632 aa13.07□□□□□ -0.32
TMEM116-203ENST00000546537 ANTXR1Q9H6X2 564 aa13.07□□□□□ -0.32
TMEM116-203ENST00000546537 UBE2ZQ9H832 354 aaPredicted RBP13.07□□□□□ -0.32
TMEM116-203ENST00000546537 DBNLQ9UJU6 430 aaKnown RBP13.07□□□□□ -0.32
TMEM116-203ENST00000546537 GNEQ9Y223 722 aaKnown RBP13.07□□□□□ -0.32
TMEM116-203ENST00000546537 TANC1Q9C0D5 1861 aa13.07□□□□□ -0.32
TMEM116-203ENST00000546537 ZNF318Q5VUA4 2279 aa13.06□□□□□ -0.32
TMEM116-203ENST00000546537 BAZ2AQ9UIF9 1905 aaKnown RBP13.06□□□□□ -0.32
TMEM116-203ENST00000546537 MAGEB6P1A0A0J9YX57 407 aa13.06□□□□□ -0.32
TMEM116-203ENST00000546537 KIF28PB7ZC32 967 aa13.06□□□□□ -0.32
TMEM116-203ENST00000546537 GNAI2P04899 355 aa13.06□□□□□ -0.32
TMEM116-203ENST00000546537 CYP2D6P10635 497 aa13.06□□□□□ -0.32
TMEM116-203ENST00000546537 SSTR3P32745 418 aaPredicted RBP13.06□□□□□ -0.32
TMEM116-203ENST00000546537 TNFAIP2Q03169 654 aa13.06□□□□□ -0.32
TMEM116-203ENST00000546537 SLFN5Q08AF3 891 aa13.06□□□□□ -0.32
TMEM116-203ENST00000546537 LEXMQ3ZCV2 418 aa13.06□□□□□ -0.32
TMEM116-203ENST00000546537 FAM83BQ5T0W9 1011 aa13.06□□□□□ -0.32
TMEM116-203ENST00000546537 SPRED2Q7Z698 418 aa13.06□□□□□ -0.32
TMEM116-203ENST00000546537 DEFB128Q7Z7B8 93 aa13.06□□□□□ -0.32
TMEM116-203ENST00000546537 HERC6Q8IVU3 1022 aa13.06□□□□□ -0.32
TMEM116-203ENST00000546537 CCDC144CPQ8IYA2 1237 aa13.06□□□□□ -0.32
TMEM116-203ENST00000546537 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.06□□□□□ -0.32
TMEM116-203ENST00000546537 DYNLL2Q96FJ2 89 aa13.06□□□□□ -0.32
TMEM116-203ENST00000546537 CCDC17Q96LX7 622 aa13.06□□□□□ -0.32
TMEM116-203ENST00000546537 CRNKL1Q9BZJ0 848 aaKnown RBP13.06□□□□□ -0.32
TMEM116-203ENST00000546537 GOPCQ9HD26 462 aa13.06□□□□□ -0.32
TMEM116-203ENST00000546537 DCP1AQ9NPI6 582 aaPredicted RBP13.06□□□□□ -0.32
TMEM116-203ENST00000546537 USP34Q70CQ2 3546 aa13.05□□□□□ -0.32
TMEM116-203ENST00000546537 POTEB3A0JP26 581 aa13.05□□□□□ -0.32
TMEM116-203ENST00000546537 ATP2A1O14983 1001 aa13.05□□□□□ -0.32
TMEM116-203ENST00000546537 IL9P15248 144 aa13.05□□□□□ -0.32
TMEM116-203ENST00000546537 PSMC6P62333 389 aa13.05□□□□□ -0.32
TMEM116-203ENST00000546537 FSCN1Q16658 493 aaKnown RBP13.05□□□□□ -0.32
TMEM116-203ENST00000546537 POTEBQ6S5H4 581 aa13.05□□□□□ -0.32
TMEM116-203ENST00000546537 TLK2Q86UE8 772 aa13.05□□□□□ -0.32
TMEM116-203ENST00000546537 FAM9BQ8IZU0 186 aa13.05□□□□□ -0.32
TMEM116-203ENST00000546537 SDR42E1Q8WUS8 393 aa13.05□□□□□ -0.32
TMEM116-203ENST00000546537 SLF1Q9BQI6 1058 aa13.05□□□□□ -0.32
TMEM116-203ENST00000546537 ALDH8A1Q9H2A2 487 aaPredicted RBP13.05□□□□□ -0.32
TMEM116-203ENST00000546537 TLR7Q9NYK1 1049 aaKnown RBP13.05□□□□□ -0.32
TMEM116-203ENST00000546537 SIP14410 1827 aa13.04□□□□□ -0.32
TMEM116-203ENST00000546537 GREB1LQ9C091 1923 aaPredicted RBP13.04□□□□□ -0.32
TMEM116-203ENST00000546537 DCXO43602 365 aa13.04□□□□□ -0.32
TMEM116-203ENST00000546537 ZEB2O60315 1214 aa13.04□□□□□ -0.32
TMEM116-203ENST00000546537 RFC2P35250 354 aa13.04□□□□□ -0.32
TMEM116-203ENST00000546537 NOL8Q76FK4 1167 aaKnown RBP13.04□□□□□ -0.32
TMEM116-203ENST00000546537 ANKRD35Q8N283 1001 aa13.04□□□□□ -0.32
TMEM116-203ENST00000546537 KANSL2Q9H9L4 492 aa13.04□□□□□ -0.32
TMEM116-203ENST00000546537 TET1Q8NFU7 2136 aa13.03□□□□□ -0.32
TMEM116-203ENST00000546537 SUPT20HL2P0C7V6 817 aa13.03□□□□□ -0.32
TMEM116-203ENST00000546537 CYP2C9P11712 490 aa13.03□□□□□ -0.32
TMEM116-203ENST00000546537 OS9Q13438 667 aaPredicted RBP13.03□□□□□ -0.32
TMEM116-203ENST00000546537 POLA2Q14181 598 aa13.03□□□□□ -0.32
TMEM116-203ENST00000546537 PRPF38AQ8NAV1 312 aaKnown RBP13.03□□□□□ -0.32
TMEM116-203ENST00000546537 GDPD5Q8WTR4 605 aa13.03□□□□□ -0.32
TMEM116-203ENST00000546537 ARHGAP45Q92619 1136 aa13.03□□□□□ -0.32
TMEM116-203ENST00000546537 AP5M1Q9H0R1 490 aa13.03□□□□□ -0.32
TMEM116-203ENST00000546537 CCDC8Q9H0W5 538 aaPredicted RBP13.03□□□□□ -0.32
TMEM116-203ENST00000546537 TRMT13Q9NUP7 481 aaKnown RBP13.03□□□□□ -0.32
TMEM116-203ENST00000546537 FBXO40Q9UH90 709 aa13.03□□□□□ -0.32
TMEM116-203ENST00000546537 ZNF536O15090 1300 aa13.03□□□□□ -0.32
TMEM116-203ENST00000546537 GRXCR2A6NFK2 248 aa13.02□□□□□ -0.33
TMEM116-203ENST00000546537 DYNC1LI2O43237 492 aaPredicted RBP13.02□□□□□ -0.33
TMEM116-203ENST00000546537 RAD21O60216 631 aa13.02□□□□□ -0.33
TMEM116-203ENST00000546537 ST18O60284 1047 aa13.02□□□□□ -0.33
TMEM116-203ENST00000546537 CT47B1P0C2W7 299 aaPredicted RBP13.02□□□□□ -0.33
TMEM116-203ENST00000546537 SMPD1P17405 629 aa13.02□□□□□ -0.33
TMEM116-203ENST00000546537 KCNA5P22460 613 aa13.02□□□□□ -0.33
TMEM116-203ENST00000546537 PTGS1P23219 599 aa13.02□□□□□ -0.33
TMEM116-203ENST00000546537 SLC4A3P48751 1232 aa13.02□□□□□ -0.33
TMEM116-203ENST00000546537 CDK8P49336 464 aa13.02□□□□□ -0.33
TMEM116-203ENST00000546537 PTCRAQ6ISU1 281 aaPredicted RBP13.02□□□□□ -0.33
TMEM116-203ENST00000546537 CPXCR1Q8N123 301 aa13.02□□□□□ -0.33
TMEM116-203ENST00000546537 CHST13Q8NET6 341 aa13.02□□□□□ -0.33
TMEM116-203ENST00000546537 EAF2Q96CJ1 260 aaPredicted RBP13.02□□□□□ -0.33
TMEM116-203ENST00000546537 PHOX2BQ99453 314 aa13.02□□□□□ -0.33
TMEM116-203ENST00000546537 NUP88Q99567 741 aaPredicted RBP13.02□□□□□ -0.33
TMEM116-203ENST00000546537 Q9Y3F1 56 aa13.02□□□□□ -0.33
TMEM116-203ENST00000546537 TNKSO95271 1327 aa13.02□□□□□ -0.33
TMEM116-203ENST00000546537 LCHNA4D1U4 455 aa13.01□□□□□ -0.33
TMEM116-203ENST00000546537 ZBED4O75132 1171 aa13.01□□□□□ -0.33
TMEM116-203ENST00000546537 SURF6O75683 361 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms