RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 CCDC186Q7Z3E2 898 aa13.63□□□□□ -0.23
CCDC38-202ENST00000546386 TAOK3Q9H2K8 898 aa13.63□□□□□ -0.23
CCDC38-202ENST00000546386 POLD4Q9HCU8 107 aa13.63□□□□□ -0.23
CCDC38-202ENST00000546386 MAST2Q6P0Q8 1798 aa13.62□□□□□ -0.23
CCDC38-202ENST00000546386 ERCC3P19447 782 aa13.62□□□□□ -0.23
CCDC38-202ENST00000546386 RCAN1P53805 252 aa13.62□□□□□ -0.23
CCDC38-202ENST00000546386 ZNF543Q08ER8 600 aa13.62□□□□□ -0.23
CCDC38-202ENST00000546386 SOGA3Q5TF21 947 aa13.62□□□□□ -0.23
CCDC38-202ENST00000546386 POTEDQ86YR6 584 aa13.62□□□□□ -0.23
CCDC38-202ENST00000546386 FBXO28Q9NVF7 368 aa13.62□□□□□ -0.23
CCDC38-202ENST00000546386 FAM13BQ9NYF5 915 aa13.62□□□□□ -0.23
CCDC38-202ENST00000546386 ZNRF3Q9ULT6 936 aa13.62□□□□□ -0.23
CCDC38-202ENST00000546386 NOL7Q9UMY1 257 aaKnown RBP13.62□□□□□ -0.23
CCDC38-202ENST00000546386 SUGT1Q9Y2Z0 365 aa13.62□□□□□ -0.23
CCDC38-202ENST00000546386 SMC2O95347 1197 aa13.62□□□□□ -0.23
CCDC38-202ENST00000546386 TRMT1LQ7Z2T5 733 aaKnown RBP13.62□□□□□ -0.23
CCDC38-202ENST00000546386 TBC1D5Q92609 795 aa13.62□□□□□ -0.23
CCDC38-202ENST00000546386 ANKS1AQ92625 1134 aa13.62□□□□□ -0.23
CCDC38-202ENST00000546386 ANO10Q9NW15 660 aa13.62□□□□□ -0.23
CCDC38-202ENST00000546386 POSTNQ15063 836 aa13.61□□□□□ -0.23
CCDC38-202ENST00000546386 CCDC174Q6PII3 467 aa13.61□□□□□ -0.23
CCDC38-202ENST00000546386 LRRC15Q8TF66 581 aa13.61□□□□□ -0.23
CCDC38-202ENST00000546386 HPS3Q969F9 1004 aa13.61□□□□□ -0.23
CCDC38-202ENST00000546386 SLC37A4O43826 429 aa13.61□□□□□ -0.23
CCDC38-202ENST00000546386 VIL1P09327 827 aaKnown RBP13.61□□□□□ -0.23
CCDC38-202ENST00000546386 FMR1Q06787 632 aaKnown RBP eCLIP13.61□□□□□ -0.23
CCDC38-202ENST00000546386 CEP57L1Q8IYX8 460 aa13.61□□□□□ -0.23
CCDC38-202ENST00000546386 IGKV6D-41A0A0C4DH26 115 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 NDUFB10O96000 172 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 ZSCAN30Q86W11 494 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 FAM43AQ8N2R8 423 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 DPF2Q92785 391 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 KIFC2Q96AC6 838 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 MTRQ99707 1265 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 KCNF1Q9H3M0 494 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 FANCLQ9NW38 375 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 TMOD2Q9NZR1 351 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 PYCARDQ9ULZ3 195 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 PCDHA1Q9Y5I3 950 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 POTEMA6NI47 508 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 ACTN4O43707 911 aaKnown RBP13.6□□□□□ -0.23
CCDC38-202ENST00000546386 GNAQP50148 359 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 CUL4BQ13620 913 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 RASA3Q14644 834 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 QRICH1Q2TAL8 776 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 FCHSD1Q86WN1 690 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 REXO1Q8N1G1 1221 aaKnown RBP13.6□□□□□ -0.23
CCDC38-202ENST00000546386 SUPT20HQ8NEM7 779 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 IDI2Q9BXS1 227 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 IFNKQ9P0W0 207 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 C10orf71Q711Q0 1435 aa13.6□□□□□ -0.23
CCDC38-202ENST00000546386 M0R2N6 131 aa13.59□□□□□ -0.23
CCDC38-202ENST00000546386 CTAGE5O15320 804 aa13.59□□□□□ -0.23
CCDC38-202ENST00000546386 MDM2Q00987 491 aaPredicted RBP13.59□□□□□ -0.23
CCDC38-202ENST00000546386 RAD51AP2Q09MP3 1159 aa13.59□□□□□ -0.23
CCDC38-202ENST00000546386 FAM83BQ5T0W9 1011 aa13.59□□□□□ -0.23
CCDC38-202ENST00000546386 ARHGAP27Q6ZUM4 889 aa13.59□□□□□ -0.23
CCDC38-202ENST00000546386 GMLQ99445 158 aa13.59□□□□□ -0.23
CCDC38-202ENST00000546386 P2RX7Q99572 595 aaKnown RBP13.59□□□□□ -0.23
CCDC38-202ENST00000546386 MTFR1LQ9H019 292 aa13.59□□□□□ -0.23
CCDC38-202ENST00000546386 MYOZ2Q9NPC6 264 aa13.59□□□□□ -0.23
CCDC38-202ENST00000546386 MAN1B1Q9UKM7 699 aa13.59□□□□□ -0.23
CCDC38-202ENST00000546386 CEP131Q9UPN4 1083 aa13.59□□□□□ -0.23
CCDC38-202ENST00000546386 CALML3P27482 149 aa13.59□□□□□ -0.23
CCDC38-202ENST00000546386 GMPSP49915 693 aaPredicted RBP13.59□□□□□ -0.23
CCDC38-202ENST00000546386 ZNF75DP51815 510 aa13.59□□□□□ -0.23
CCDC38-202ENST00000546386 ATP2C1P98194 919 aaPredicted RBP13.59□□□□□ -0.23
CCDC38-202ENST00000546386 CIAPIN1Q6FI81 312 aa13.59□□□□□ -0.23
CCDC38-202ENST00000546386 MICALL2Q8IY33 904 aa13.59□□□□□ -0.23
CCDC38-202ENST00000546386 SPZ1Q9BXG8 430 aa13.59□□□□□ -0.23
CCDC38-202ENST00000546386 EDIL3O43854 480 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 CD44P16070 742 aaKnown RBP13.58□□□□□ -0.24
CCDC38-202ENST00000546386 HMGB2P26583 209 aaKnown RBP13.58□□□□□ -0.24
CCDC38-202ENST00000546386 CERS3Q8IU89 383 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 C4orf32Q8N8J7 132 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 CYP2W1Q8TAV3 490 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 PAGE5Q96GU1 130 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 NUDT12Q9BQG2 462 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 ZMYND12Q9H0C1 365 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 DHX36Q9H2U1 1008 aaKnown RBP13.58□□□□□ -0.24
CCDC38-202ENST00000546386 RIOX1Q9H6W3 641 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 C6orf50Q9HD87 102 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 HOMER2Q9NSB8 354 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 SWAP70Q9UH65 585 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 LAMA2P24043 3122 aaKnown RBP13.58□□□□□ -0.24
CCDC38-202ENST00000546386 PEX10O60683 326 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 NLRP12P59046 1061 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 CDC37Q16543 378 aaPredicted RBP13.58□□□□□ -0.24
CCDC38-202ENST00000546386 MED15Q96RN5 788 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 PSMD1Q99460 953 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 XPO4Q9C0E2 1151 aaKnown RBP13.58□□□□□ -0.24
CCDC38-202ENST00000546386 PSTPIP2Q9H939 334 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 KANSL2Q9H9L4 492 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 SAMSN1Q9NSI8 373 aaKnown RBP13.58□□□□□ -0.24
CCDC38-202ENST00000546386 HDAC9Q9UKV0 1011 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 CNTNAP1P78357 1384 aa13.58□□□□□ -0.24
CCDC38-202ENST00000546386 UVSSAQ2YD98 709 aa13.57□□□□□ -0.24
CCDC38-202ENST00000546386 DTHD1Q6ZMT9 781 aa13.57□□□□□ -0.24
CCDC38-202ENST00000546386 SMARCE1Q969G3 411 aa13.57□□□□□ -0.24
CCDC38-202ENST00000546386 ZKSCAN4Q969J2 545 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms