RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 GPHNQ9NQX3 736 aaPredicted RBP8.97□□□□□ -0.97
KDM1B-203ENST00000546309 FAM217BQ9NTX9 383 aaPredicted RBP8.97□□□□□ -0.97
KDM1B-203ENST00000546309 TNKSO95271 1327 aa8.97□□□□□ -0.97
KDM1B-203ENST00000546309 STK36Q9NRP7 1315 aa8.97□□□□□ -0.97
KDM1B-203ENST00000546309 PLIN4Q96Q06 1357 aa8.97□□□□□ -0.97
KDM1B-203ENST00000546309 A0A1W2PPC1 479 aa8.96□□□□□ -0.98
KDM1B-203ENST00000546309 PTPDC1A2A3K4 754 aa8.96□□□□□ -0.98
KDM1B-203ENST00000546309 GOLGA8BA8MQT2 603 aa8.96□□□□□ -0.98
KDM1B-203ENST00000546309 RANBP6O60518 1105 aaKnown RBP8.96□□□□□ -0.98
KDM1B-203ENST00000546309 F13A1P00488 732 aa8.96□□□□□ -0.98
KDM1B-203ENST00000546309 COL6A1P12109 1028 aa8.96□□□□□ -0.98
KDM1B-203ENST00000546309 FDPSP14324 419 aaKnown RBP8.96□□□□□ -0.98
KDM1B-203ENST00000546309 RASA1P20936 1047 aa8.96□□□□□ -0.98
KDM1B-203ENST00000546309 CDK8P49336 464 aa8.96□□□□□ -0.98
KDM1B-203ENST00000546309 CCT2P78371 535 aaKnown RBP8.96□□□□□ -0.98
KDM1B-203ENST00000546309 CACNB2Q08289 660 aaPredicted RBP8.96□□□□□ -0.98
KDM1B-203ENST00000546309 TROAPQ12815 778 aa8.96□□□□□ -0.98
KDM1B-203ENST00000546309 STK3Q13188 491 aa8.96□□□□□ -0.98
KDM1B-203ENST00000546309 RRP12Q5JTH9 1297 aaKnown RBP8.96□□□□□ -0.98
KDM1B-203ENST00000546309 PPP4R3BQ5MIZ7 849 aa8.96□□□□□ -0.98
KDM1B-203ENST00000546309 ATL3Q6DD88 541 aa8.96□□□□□ -0.98
KDM1B-203ENST00000546309 ZNF444Q8N0Y2 327 aaPredicted RBP8.96□□□□□ -0.98
KDM1B-203ENST00000546309 FANCBQ8NB91 859 aa8.96□□□□□ -0.98
KDM1B-203ENST00000546309 TMEM87AQ8NBN3 555 aa8.96□□□□□ -0.98
KDM1B-203ENST00000546309 LRCH3Q96II8 777 aa8.96□□□□□ -0.98
KDM1B-203ENST00000546309 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.96□□□□□ -0.98
KDM1B-203ENST00000546309 MKNK2Q9HBH9 465 aa8.96□□□□□ -0.98
KDM1B-203ENST00000546309 TOMM22Q9NS69 142 aa8.96□□□□□ -0.98
KDM1B-203ENST00000546309 RBM28Q9NW13 759 aaKnown RBP8.96□□□□□ -0.98
KDM1B-203ENST00000546309 PNMA3Q9UL41 463 aa8.96□□□□□ -0.98
KDM1B-203ENST00000546309 MYH8P13535 1937 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 TSPY2A6NKD2 308 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 SPDYE16A6NNV3 312 aaPredicted RBP8.95□□□□□ -0.98
KDM1B-203ENST00000546309 CPLX1O14810 134 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 JAK2O60674 1132 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 ASNSP08243 561 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 AKR1B1P15121 316 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 VCAM1P19320 739 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 CYP2B6P20813 491 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 SMARCA1P28370 1054 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 ZYXQ15942 572 aaKnown RBP8.95□□□□□ -0.98
KDM1B-203ENST00000546309 IFIT1BQ5T764 474 aaKnown RBP8.95□□□□□ -0.98
KDM1B-203ENST00000546309 RCSD1Q6JBY9 416 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 NFXL1Q6ZNB6 911 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 CATSPERGQ6ZRH7 1159 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 NECAB2Q7Z6G3 386 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 CATIPQ7Z7H3 387 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 ZNF654Q8IZM8 581 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 FAM177A1Q8N128 213 aaPredicted RBP8.95□□□□□ -0.98
KDM1B-203ENST00000546309 FAM184AQ8NB25 1140 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 WASF1Q92558 559 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 CCDC17Q96LX7 622 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 GDF15Q99988 308 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 SENP2Q9HC62 589 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 IL17RBQ9NRM6 502 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 SERPINB13Q9UIV8 391 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 OGDHLQ9ULD0 1010 aa8.95□□□□□ -0.98
KDM1B-203ENST00000546309 LTBP2Q14767 1821 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 MCM3APO60318 1980 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 IGKV6D-41A0A0C4DH26 115 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 GOLGA8AA7E2F4 631 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 USP17L10C9JJH3 530 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 PRDM1O75626 825 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 HLA-DOAP06340 250 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 CDC27P30260 824 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 ADD1P35611 737 aaKnown RBP8.94□□□□□ -0.98
KDM1B-203ENST00000546309 GCLCP48506 637 aaPredicted RBP8.94□□□□□ -0.98
KDM1B-203ENST00000546309 ERVK-9P63128 1117 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 ERVK-24P63145 666 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 TFAP4Q01664 338 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 PABPC4Q13310 644 aaKnown RBP eCLIP8.94□□□□□ -0.98
KDM1B-203ENST00000546309 RTN1Q16799 776 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 LBX2Q6XYB7 198 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 GPR142Q7Z601 462 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 C7orf61Q8IZ16 206 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 CRACR2BQ8N4Y2 399 aaPredicted RBP8.94□□□□□ -0.98
KDM1B-203ENST00000546309 FBXO18Q8NFZ0 1043 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 RNF26Q9BY78 433 aaPredicted RBP8.94□□□□□ -0.98
KDM1B-203ENST00000546309 KIAA1683Q9H0B3 1180 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 NCOA5Q9HCD5 579 aaKnown RBP8.94□□□□□ -0.98
KDM1B-203ENST00000546309 ZNF236Q9UL36 1845 aa8.94□□□□□ -0.98
KDM1B-203ENST00000546309 C19orf81C9J6K1 198 aa8.93□□□□□ -0.98
KDM1B-203ENST00000546309 PRPF3O43395 683 aaKnown RBP8.93□□□□□ -0.98
KDM1B-203ENST00000546309 COBLO75128 1261 aa8.93□□□□□ -0.98
KDM1B-203ENST00000546309 TSPY3P0CV98 308 aa8.93□□□□□ -0.98
KDM1B-203ENST00000546309 TSPY8P0CW00 308 aa8.93□□□□□ -0.98
KDM1B-203ENST00000546309 KIF5BP33176 963 aa8.93□□□□□ -0.98
KDM1B-203ENST00000546309 GNAQP50148 359 aa8.93□□□□□ -0.98
KDM1B-203ENST00000546309 IRX5P78411 483 aaPredicted RBP8.93□□□□□ -0.98
KDM1B-203ENST00000546309 FUT2Q10981 343 aa8.93□□□□□ -0.98
KDM1B-203ENST00000546309 CSPP1Q1MSJ5 1256 aa8.93□□□□□ -0.98
KDM1B-203ENST00000546309 MICU3Q86XE3 530 aa8.93□□□□□ -0.98
KDM1B-203ENST00000546309 CCAR1Q8IX12 1150 aaKnown RBP8.93□□□□□ -0.98
KDM1B-203ENST00000546309 REPS2Q8NFH8 660 aa8.93□□□□□ -0.98
KDM1B-203ENST00000546309 ZKSCAN3Q9BRR0 538 aa8.93□□□□□ -0.98
KDM1B-203ENST00000546309 LMBRD1Q9NUN5 540 aa8.93□□□□□ -0.98
KDM1B-203ENST00000546309 FBXO28Q9NVF7 368 aa8.93□□□□□ -0.98
KDM1B-203ENST00000546309 ORC3Q9UBD5 711 aaPredicted RBP8.93□□□□□ -0.98
KDM1B-203ENST00000546309 ZMYND8Q9ULU4 1186 aaPredicted RBP8.93□□□□□ -0.98
KDM1B-203ENST00000546309 SYNPO2Q9UMS6 1093 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms