RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 SMC3Q9UQE7 1217 aa11.98□□□□□ -0.49
LINC00939-203ENST00000545784 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC00939-203ENST00000545784 FRMPD2Q68DX3 1309 aaPredicted RBP11.97□□□□□ -0.49
LINC00939-203ENST00000545784 KLF18A0A0U1RQI7 1052 aa11.97□□□□□ -0.49
LINC00939-203ENST00000545784 FLOT1O75955 427 aa11.97□□□□□ -0.49
LINC00939-203ENST00000545784 F13A1P00488 732 aa11.97□□□□□ -0.49
LINC00939-203ENST00000545784 PDIA3P30101 505 aaKnown RBP11.97□□□□□ -0.49
LINC00939-203ENST00000545784 AK2P54819 239 aa11.97□□□□□ -0.49
LINC00939-203ENST00000545784 HERVK_113P62684 666 aa11.97□□□□□ -0.49
LINC00939-203ENST00000545784 IRX3P78415 501 aaPredicted RBP11.97□□□□□ -0.49
LINC00939-203ENST00000545784 TAF1CQ15572 869 aaPredicted RBP11.97□□□□□ -0.49
LINC00939-203ENST00000545784 GPATCH4Q5T3I0 446 aaKnown RBP11.97□□□□□ -0.49
LINC00939-203ENST00000545784 NOL8Q76FK4 1167 aaKnown RBP11.97□□□□□ -0.49
LINC00939-203ENST00000545784 SAGE1Q9NXZ1 904 aa11.97□□□□□ -0.49
LINC00939-203ENST00000545784 RBPJLQ9UBG7 517 aa11.97□□□□□ -0.49
LINC00939-203ENST00000545784 MYH4Q9Y623 1939 aa11.97□□□□□ -0.49
LINC00939-203ENST00000545784 TLR2O60603 784 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 CNMDO75829 334 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 TBC1D8O95759 1140 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 PARP1P09874 1014 aaKnown RBP11.96□□□□□ -0.49
LINC00939-203ENST00000545784 RXRAP19793 462 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 SLC16A2P36021 539 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 RCAN1P53805 252 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 FGD1P98174 961 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 ASPRV1Q53RT3 343 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 C17orf99Q6UX52 265 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 RAB11FIP4Q86YS3 637 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 FANCBQ8NB91 859 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 REPS2Q8NFH8 660 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 MYRIPQ8NFW9 859 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 CHURC1Q8WUH1 139 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 PARK7Q99497 189 aaKnown RBP11.96□□□□□ -0.49
LINC00939-203ENST00000545784 SLF1Q9BQI6 1058 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 UBA5Q9GZZ9 404 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 ZFYVE28Q9HCC9 887 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 TXNRD2Q9NNW7 524 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 PNMA3Q9UL41 463 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 TPCN1Q9ULQ1 816 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 MYPNQ86TC9 1320 aa11.96□□□□□ -0.49
LINC00939-203ENST00000545784 GOLGA6L6A8MZA4 724 aa11.96□□□□□ -0.5
LINC00939-203ENST00000545784 VWA5AO00534 786 aa11.96□□□□□ -0.5
LINC00939-203ENST00000545784 PEX10O60683 326 aa11.96□□□□□ -0.5
LINC00939-203ENST00000545784 GADD45BO75293 160 aaPredicted RBP11.96□□□□□ -0.5
LINC00939-203ENST00000545784 CALM1P0DP23 149 aa11.96□□□□□ -0.5
LINC00939-203ENST00000545784 CALM2P0DP24 149 aa11.96□□□□□ -0.5
LINC00939-203ENST00000545784 CALM3P0DP25 149 aa11.96□□□□□ -0.5
LINC00939-203ENST00000545784 BCRP11274 1271 aa11.96□□□□□ -0.5
LINC00939-203ENST00000545784 SYT1P21579 422 aa11.96□□□□□ -0.5
LINC00939-203ENST00000545784 GTF2F1P35269 517 aaKnown RBP eCLIP11.96□□□□□ -0.5
LINC00939-203ENST00000545784 STAT2P52630 851 aa11.96□□□□□ -0.5
LINC00939-203ENST00000545784 CCDC96Q2M329 555 aa11.96□□□□□ -0.5
LINC00939-203ENST00000545784 DNTTIP2Q5QJE6 756 aaKnown RBP11.96□□□□□ -0.5
LINC00939-203ENST00000545784 NBPF11Q86T75 865 aa11.96□□□□□ -0.5
LINC00939-203ENST00000545784 FAM160B2Q86V87 743 aa11.96□□□□□ -0.5
LINC00939-203ENST00000545784 PRPF38AQ8NAV1 312 aaKnown RBP11.96□□□□□ -0.5
LINC00939-203ENST00000545784 NUP133Q8WUM0 1156 aa11.96□□□□□ -0.5
LINC00939-203ENST00000545784 ATG4CQ96DT6 458 aa11.96□□□□□ -0.5
LINC00939-203ENST00000545784 ZNF274Q96GC6 653 aaPredicted RBP11.96□□□□□ -0.5
LINC00939-203ENST00000545784 CHAMP1Q96JM3 812 aa11.96□□□□□ -0.5
LINC00939-203ENST00000545784 CPVLQ9H3G5 476 aa11.96□□□□□ -0.5
LINC00939-203ENST00000545784 KLRF2D3W0D1 207 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 ZBTB43O43298 467 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 FUT2Q10981 343 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 Q3C1V9 767 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 BTBD7Q9P203 1132 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 PRR12Q9ULL5 1215 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 RLFQ13129 1914 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 NID2Q14112 1375 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 CYTH3O43739 400 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 CDC27P30260 824 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 GCLCP48506 637 aaPredicted RBP11.95□□□□□ -0.5
LINC00939-203ENST00000545784 ANKRD1Q15327 319 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 SYDE2Q5VT97 1194 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 SYNE3Q6ZMZ3 975 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 MICU3Q86XE3 530 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 CCDC144CPQ8IYA2 1237 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 SRBD1Q8N5C6 995 aaKnown RBP11.95□□□□□ -0.5
LINC00939-203ENST00000545784 KIFC2Q96AC6 838 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 MTMR8Q96EF0 704 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 SLC38A10Q9HBR0 1119 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 SPTLC3Q9NUV7 552 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 MORF4L1Q9UBU8 362 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 USP25Q9UHP3 1055 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 CPA4Q9UI42 421 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 RABGAP1Q9Y3P9 1069 aa11.95□□□□□ -0.5
LINC00939-203ENST00000545784 GOLGA8BA8MQT2 603 aa11.94□□□□□ -0.5
LINC00939-203ENST00000545784 PLEKHA8P1O95397 391 aa11.94□□□□□ -0.5
LINC00939-203ENST00000545784 ADCY5O95622 1261 aa11.94□□□□□ -0.5
LINC00939-203ENST00000545784 SMARCA1P28370 1054 aa11.94□□□□□ -0.5
LINC00939-203ENST00000545784 RBM10P98175 930 aaKnown RBP11.94□□□□□ -0.5
LINC00939-203ENST00000545784 NOLC1Q14978 699 aaKnown RBP eCLIP11.94□□□□□ -0.5
LINC00939-203ENST00000545784 TMEM132BQ14DG7 1078 aa11.94□□□□□ -0.5
LINC00939-203ENST00000545784 ADGRF4Q8IZF3 695 aa11.94□□□□□ -0.5
LINC00939-203ENST00000545784 GTF3C2Q8WUA4 911 aaPredicted RBP11.94□□□□□ -0.5
LINC00939-203ENST00000545784 RIOX1Q9H6W3 641 aa11.94□□□□□ -0.5
LINC00939-203ENST00000545784 JMJD4Q9H9V9 463 aa11.94□□□□□ -0.5
LINC00939-203ENST00000545784 GDPD2Q9HCC8 539 aa11.94□□□□□ -0.5
LINC00939-203ENST00000545784 CNPY2Q9Y2B0 182 aa11.94□□□□□ -0.5
LINC00939-203ENST00000545784 PDCP20941 246 aa11.93□□□□□ -0.5
LINC00939-203ENST00000545784 KIF5BP33176 963 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms