RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 FBXO40Q9UH90 709 aa24.97■■□□□ 1.59
SCARB1-210ENST00000545493 MTMR7Q9Y216 660 aa24.97■■□□□ 1.59
SCARB1-210ENST00000545493 SNAI1O95863 264 aaPredicted RBP24.96■■□□□ 1.59
SCARB1-210ENST00000545493 MYCNP04198 464 aaPredicted RBP24.96■■□□□ 1.59
SCARB1-210ENST00000545493 AKR1A1P14550 325 aa24.96■■□□□ 1.59
SCARB1-210ENST00000545493 SNX17Q15036 470 aa24.96■■□□□ 1.59
SCARB1-210ENST00000545493 ZNF467Q7Z7K2 595 aaPredicted RBP24.96■■□□□ 1.59
SCARB1-210ENST00000545493 ANKRD35Q8N283 1001 aa24.96■■□□□ 1.59
SCARB1-210ENST00000545493 CHURC1Q8WUH1 139 aa24.96■■□□□ 1.59
SCARB1-210ENST00000545493 AGBL1Q96MI9 1066 aa24.96■■□□□ 1.59
SCARB1-210ENST00000545493 ACAD9Q9H845 621 aa24.96■■□□□ 1.59
SCARB1-210ENST00000545493 CNPY2Q9Y2B0 182 aa24.96■■□□□ 1.59
SCARB1-210ENST00000545493 SNAP25P60880 206 aa24.95■■□□□ 1.58
SCARB1-210ENST00000545493 RCSD1Q6JBY9 416 aa24.95■■□□□ 1.58
SCARB1-210ENST00000545493 DCAF4Q8WV16 495 aa24.95■■□□□ 1.58
SCARB1-210ENST00000545493 TMEM47Q9BQJ4 181 aa24.95■■□□□ 1.58
SCARB1-210ENST00000545493 RNF146Q9NTX7 359 aa24.95■■□□□ 1.58
SCARB1-210ENST00000545493 TCP11L1Q9NUJ3 509 aa24.95■■□□□ 1.58
SCARB1-210ENST00000545493 PRR12Q9ULL5 1215 aa24.95■■□□□ 1.58
SCARB1-210ENST00000545493 ADAMTS4O75173 837 aa24.94■■□□□ 1.58
SCARB1-210ENST00000545493 PGK1P00558 417 aa24.94■■□□□ 1.58
SCARB1-210ENST00000545493 CCDC96Q2M329 555 aa24.94■■□□□ 1.58
SCARB1-210ENST00000545493 AKNAD1Q5T1N1 836 aa24.94■■□□□ 1.58
SCARB1-210ENST00000545493 CCDC174Q6PII3 467 aa24.94■■□□□ 1.58
SCARB1-210ENST00000545493 CWC27Q6UX04 472 aaKnown RBP24.94■■□□□ 1.58
SCARB1-210ENST00000545493 A1CFQ9NQ94 594 aaKnown RBP24.94■■□□□ 1.58
SCARB1-210ENST00000545493 ZHX1Q9UKY1 873 aaPredicted RBP24.94■■□□□ 1.58
SCARB1-210ENST00000545493 SYNRGQ9UMZ2 1314 aa24.93■■□□□ 1.58
SCARB1-210ENST00000545493 PDE4AP27815 886 aa24.93■■□□□ 1.58
SCARB1-210ENST00000545493 ADCYAP1R1P41586 468 aa24.93■■□□□ 1.58
SCARB1-210ENST00000545493 MFAP1P55081 439 aaKnown RBP24.93■■□□□ 1.58
SCARB1-210ENST00000545493 MDM2Q00987 491 aaPredicted RBP24.93■■□□□ 1.58
SCARB1-210ENST00000545493 SLC39A5Q6ZMH5 540 aa24.93■■□□□ 1.58
SCARB1-210ENST00000545493 LRCH3Q96II8 777 aa24.93■■□□□ 1.58
SCARB1-210ENST00000545493 DIAPH3Q9NSV4 1193 aa24.93■■□□□ 1.58
SCARB1-210ENST00000545493 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.93■■□□□ 1.58
SCARB1-210ENST00000545493 PHF24Q9UPV7 400 aa24.93■■□□□ 1.58
SCARB1-210ENST00000545493 ATP11BQ9Y2G3 1177 aa24.93■■□□□ 1.58
SCARB1-210ENST00000545493 ADCY6O43306 1168 aa24.92■■□□□ 1.58
SCARB1-210ENST00000545493 TOP1P11387 765 aaKnown RBP24.92■■□□□ 1.58
SCARB1-210ENST00000545493 TRIM60Q495X7 471 aa24.92■■□□□ 1.58
SCARB1-210ENST00000545493 TTBK2Q6IQ55 1244 aa24.92■■□□□ 1.58
SCARB1-210ENST00000545493 ARMCX2Q7L311 632 aa24.92■■□□□ 1.58
SCARB1-210ENST00000545493 FAM133AQ8N9E0 248 aa24.92■■□□□ 1.58
SCARB1-210ENST00000545493 FERMT2Q96AC1 680 aa24.92■■□□□ 1.58
SCARB1-210ENST00000545493 IL25Q9H293 177 aa24.92■■□□□ 1.58
SCARB1-210ENST00000545493 RANBP17Q9H2T7 1088 aaKnown RBP24.92■■□□□ 1.58
SCARB1-210ENST00000545493 FRMPD2Q68DX3 1309 aaPredicted RBP24.91■■□□□ 1.58
SCARB1-210ENST00000545493 PCP11498 1178 aaKnown RBP24.91■■□□□ 1.58
SCARB1-210ENST00000545493 CNTN2Q02246 1040 aa24.91■■□□□ 1.58
SCARB1-210ENST00000545493 TKFCQ3LXA3 575 aa24.91■■□□□ 1.58
SCARB1-210ENST00000545493 MFSD6Q6ZSS7 791 aa24.91■■□□□ 1.58
SCARB1-210ENST00000545493 RNF180Q86T96 592 aa24.91■■□□□ 1.58
SCARB1-210ENST00000545493 TDHQ8IZJ6 230 aa24.91■■□□□ 1.58
SCARB1-210ENST00000545493 UBE2OQ9C0C9 1292 aaKnown RBP24.91■■□□□ 1.58
SCARB1-210ENST00000545493 KATNBL1Q9H079 304 aa24.91■■□□□ 1.58
SCARB1-210ENST00000545493 ASTN1O14525 1302 aa24.9■■□□□ 1.58
SCARB1-210ENST00000545493 PDHBP11177 359 aa24.9■■□□□ 1.58
SCARB1-210ENST00000545493 ALAS1P13196 640 aa24.9■■□□□ 1.58
SCARB1-210ENST00000545493 GSPT1P15170 499 aaKnown RBP24.9■■□□□ 1.58
SCARB1-210ENST00000545493 IRX6P78412 446 aaPredicted RBP24.9■■□□□ 1.58
SCARB1-210ENST00000545493 ACVR2BQ13705 512 aa24.9■■□□□ 1.58
SCARB1-210ENST00000545493 MUM1L1Q5H9M0 696 aa24.9■■□□□ 1.58
SCARB1-210ENST00000545493 BTNL9Q6UXG8 535 aa24.9■■□□□ 1.58
SCARB1-210ENST00000545493 CCDC144CPQ8IYA2 1237 aa24.9■■□□□ 1.58
SCARB1-210ENST00000545493 TRERF1Q96PN7 1200 aa24.9■■□□□ 1.58
SCARB1-210ENST00000545493 A0A1W2PQ45 241 aaPredicted RBP24.89■■□□□ 1.58
SCARB1-210ENST00000545493 A0A1W2PQY0 241 aa24.89■■□□□ 1.58
SCARB1-210ENST00000545493 MYADML2A6NDP7 307 aa24.89■■□□□ 1.58
SCARB1-210ENST00000545493 HIP1O00291 1037 aa24.89■■□□□ 1.58
SCARB1-210ENST00000545493 SLC16A2P36021 539 aa24.89■■□□□ 1.58
SCARB1-210ENST00000545493 C1orf53Q5VUE5 145 aa24.89■■□□□ 1.58
SCARB1-210ENST00000545493 RNF41Q9H4P4 317 aaPredicted RBP24.89■■□□□ 1.58
SCARB1-210ENST00000545493 FAM184BQ9ULE4 1060 aa24.89■■□□□ 1.58
SCARB1-210ENST00000545493 COL6A3P12111 3177 aa24.88■■□□□ 1.57
SCARB1-210ENST00000545493 SOWAHBA6NEL2 793 aa24.88■■□□□ 1.57
SCARB1-210ENST00000545493 POTEB2H3BUK9 544 aa24.88■■□□□ 1.57
SCARB1-210ENST00000545493 ICAM1P05362 532 aa24.88■■□□□ 1.57
SCARB1-210ENST00000545493 SNHG28P0DPA3 235 aa24.88■■□□□ 1.57
SCARB1-210ENST00000545493 SYDE2Q5VT97 1194 aa24.88■■□□□ 1.57
SCARB1-210ENST00000545493 ABHD16BQ9H3Z7 469 aa24.88■■□□□ 1.57
SCARB1-210ENST00000545493 PDLIM7Q9NR12 457 aa24.88■■□□□ 1.57
SCARB1-210ENST00000545493 CCPG1Q9ULG6 757 aa24.88■■□□□ 1.57
SCARB1-210ENST00000545493 IRX5P78411 483 aaPredicted RBP24.87■■□□□ 1.57
SCARB1-210ENST00000545493 TTC22Q5TAA0 569 aa24.87■■□□□ 1.57
SCARB1-210ENST00000545493 KLHDC9Q8NEP7 349 aa24.87■■□□□ 1.57
SCARB1-210ENST00000545493 DSCC1Q9BVC3 393 aa24.87■■□□□ 1.57
SCARB1-210ENST00000545493 DDX49Q9Y6V7 483 aaKnown RBP24.87■■□□□ 1.57
SCARB1-210ENST00000545493 ZNF213O14771 459 aa24.86■■□□□ 1.57
SCARB1-210ENST00000545493 DUSP11O75319 330 aaKnown RBP24.86■■□□□ 1.57
SCARB1-210ENST00000545493 ZNF543Q08ER8 600 aa24.86■■□□□ 1.57
SCARB1-210ENST00000545493 CCDC144BQ3MJ40 725 aa24.86■■□□□ 1.57
SCARB1-210ENST00000545493 LRIT3Q3SXY7 679 aa24.86■■□□□ 1.57
SCARB1-210ENST00000545493 CCSAPQ6IQ19 270 aaPredicted RBP24.86■■□□□ 1.57
SCARB1-210ENST00000545493 ESR2Q92731 530 aa24.86■■□□□ 1.57
SCARB1-210ENST00000545493 ZKSCAN3Q9BRR0 538 aa24.86■■□□□ 1.57
SCARB1-210ENST00000545493 GPCPD1Q9NPB8 672 aa24.86■■□□□ 1.57
SCARB1-210ENST00000545493 PRDM5Q9NQX1 630 aaPredicted RBP24.86■■□□□ 1.57
SCARB1-210ENST00000545493 CYP39A1Q9NYL5 469 aa24.86■■□□□ 1.57
SCARB1-210ENST00000545493 TTC14Q96N46 770 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms