RNA–Protein interactions for RNA: ENST00000545224.5

SRRM4-203, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-203ENST00000545224 SPZ1Q9BXG8 430 aa13.22□□□□□ -0.29
SRRM4-203ENST00000545224 NCOA5Q9HCD5 579 aaKnown RBP13.22□□□□□ -0.29
SRRM4-203ENST00000545224 RBM28Q9NW13 759 aaKnown RBP13.22□□□□□ -0.29
SRRM4-203ENST00000545224 PNMA3Q9UL41 463 aa13.22□□□□□ -0.29
SRRM4-203ENST00000545224 ZNF214Q9UL59 606 aaPredicted RBP13.22□□□□□ -0.29
SRRM4-203ENST00000545224 PTPN22Q9Y2R2 807 aa13.22□□□□□ -0.29
SRRM4-203ENST00000545224 BAZ2BQ9UIF8 2168 aaKnown RBP13.21□□□□□ -0.29
SRRM4-203ENST00000545224 CNTNAP5Q8WYK1 1306 aa13.21□□□□□ -0.29
SRRM4-203ENST00000545224 COL11A1P12107 1806 aaPredicted RBP13.21□□□□□ -0.29
SRRM4-203ENST00000545224 POTEFA5A3E0 1075 aa13.21□□□□□ -0.29
SRRM4-203ENST00000545224 ST18O60284 1047 aa13.21□□□□□ -0.29
SRRM4-203ENST00000545224 FDX1P10109 184 aa13.21□□□□□ -0.29
SRRM4-203ENST00000545224 KIF5BP33176 963 aa13.21□□□□□ -0.29
SRRM4-203ENST00000545224 GCLCP48506 637 aaPredicted RBP13.21□□□□□ -0.29
SRRM4-203ENST00000545224 GNAQP50148 359 aa13.21□□□□□ -0.29
SRRM4-203ENST00000545224 CAP1Q01518 475 aa13.21□□□□□ -0.29
SRRM4-203ENST00000545224 NOL8Q76FK4 1167 aaKnown RBP13.21□□□□□ -0.29
SRRM4-203ENST00000545224 NECAB1Q8N987 351 aa13.21□□□□□ -0.29
SRRM4-203ENST00000545224 GTF3C6Q969F1 213 aa13.21□□□□□ -0.29
SRRM4-203ENST00000545224 KIFC2Q96AC6 838 aa13.21□□□□□ -0.29
SRRM4-203ENST00000545224 ZSCAN31Q96LW9 406 aaPredicted RBP13.21□□□□□ -0.29
SRRM4-203ENST00000545224 LZTS2Q9BRK4 669 aa13.21□□□□□ -0.29
SRRM4-203ENST00000545224 ZFYVE28Q9HCC9 887 aa13.21□□□□□ -0.29
SRRM4-203ENST00000545224 RABGAP1Q9Y3P9 1069 aa13.21□□□□□ -0.29
SRRM4-203ENST00000545224 SMCHD1A6NHR9 2005 aa13.21□□□□□ -0.29
SRRM4-203ENST00000545224 MKI67P46013 3256 aaKnown RBP13.21□□□□□ -0.29
SRRM4-203ENST00000545224 PPP1R11O60927 126 aaPredicted RBP13.2□□□□□ -0.3
SRRM4-203ENST00000545224 IFNAR1P17181 557 aa13.2□□□□□ -0.3
SRRM4-203ENST00000545224 MCM2P49736 904 aa13.2□□□□□ -0.3
SRRM4-203ENST00000545224 SNAP25P60880 206 aa13.2□□□□□ -0.3
SRRM4-203ENST00000545224 STK3Q13188 491 aa13.2□□□□□ -0.3
SRRM4-203ENST00000545224 ARHGEF6Q15052 776 aa13.2□□□□□ -0.3
SRRM4-203ENST00000545224 MB21D1Q8N884 522 aa13.2□□□□□ -0.3
SRRM4-203ENST00000545224 GTF3C2Q8WUA4 911 aaPredicted RBP13.2□□□□□ -0.3
SRRM4-203ENST00000545224 TMX3Q96JJ7 454 aa13.2□□□□□ -0.3
SRRM4-203ENST00000545224 TMEM106CQ9BVX2 250 aa13.2□□□□□ -0.3
SRRM4-203ENST00000545224 SLKQ9H2G2 1235 aaPredicted RBP13.2□□□□□ -0.3
SRRM4-203ENST00000545224 CPA4Q9UI42 421 aa13.2□□□□□ -0.3
SRRM4-203ENST00000545224 CCDC196A0A1B0GTZ2 297 aa13.19□□□□□ -0.3
SRRM4-203ENST00000545224 FDPSP14324 419 aaKnown RBP13.19□□□□□ -0.3
SRRM4-203ENST00000545224 CTGFP29279 349 aa13.19□□□□□ -0.3
SRRM4-203ENST00000545224 OAZ1P54368 228 aa13.19□□□□□ -0.3
SRRM4-203ENST00000545224 ERVK-9P63128 1117 aa13.19□□□□□ -0.3
SRRM4-203ENST00000545224 ERVK-24P63145 666 aa13.19□□□□□ -0.3
SRRM4-203ENST00000545224 PKN1Q16512 942 aa13.19□□□□□ -0.3
SRRM4-203ENST00000545224 FAM110CQ1W6H9 321 aa13.19□□□□□ -0.3
SRRM4-203ENST00000545224 QRICH1Q2TAL8 776 aa13.19□□□□□ -0.3
SRRM4-203ENST00000545224 ANKRD13CQ8N6S4 541 aa13.19□□□□□ -0.3
SRRM4-203ENST00000545224 ARMC5Q96C12 935 aa13.19□□□□□ -0.3
SRRM4-203ENST00000545224 PIGSQ96S52 555 aa13.19□□□□□ -0.3
SRRM4-203ENST00000545224 EFCC1Q9HA90 598 aa13.19□□□□□ -0.3
SRRM4-203ENST00000545224 VAT1LQ9HCJ6 419 aa13.19□□□□□ -0.3
SRRM4-203ENST00000545224 SH2B1Q9NRF2 756 aaPredicted RBP13.19□□□□□ -0.3
SRRM4-203ENST00000545224 RIPK3Q9Y572 518 aa13.19□□□□□ -0.3
SRRM4-203ENST00000545224 CENPFP49454 3210 aa13.18□□□□□ -0.3
SRRM4-203ENST00000545224 ZBTB5O15062 677 aa13.18□□□□□ -0.3
SRRM4-203ENST00000545224 PRPF3O43395 683 aaKnown RBP13.18□□□□□ -0.3
SRRM4-203ENST00000545224 DTNBO60941 627 aa13.18□□□□□ -0.3
SRRM4-203ENST00000545224 TAL1P17542 331 aaPredicted RBP13.18□□□□□ -0.3
SRRM4-203ENST00000545224 SP3Q02447 781 aa13.18□□□□□ -0.3
SRRM4-203ENST00000545224 CUL4AQ13619 759 aa13.18□□□□□ -0.3
SRRM4-203ENST00000545224 CDC37Q16543 378 aaPredicted RBP13.18□□□□□ -0.3
SRRM4-203ENST00000545224 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.18□□□□□ -0.3
SRRM4-203ENST00000545224 RIOX2Q8IUF8 465 aa13.18□□□□□ -0.3
SRRM4-203ENST00000545224 CCDC82Q8N4S0 544 aa13.18□□□□□ -0.3
SRRM4-203ENST00000545224 NSUN7Q8NE18 718 aaKnown RBP13.18□□□□□ -0.3
SRRM4-203ENST00000545224 SMARCC2Q8TAQ2 1214 aa13.18□□□□□ -0.3
SRRM4-203ENST00000545224 SMCR8Q8TEV9 937 aaPredicted RBP13.18□□□□□ -0.3
SRRM4-203ENST00000545224 SHISA4Q96DD7 197 aa13.18□□□□□ -0.3
SRRM4-203ENST00000545224 AGBL1Q96MI9 1066 aa13.18□□□□□ -0.3
SRRM4-203ENST00000545224 MOV10L1Q9BXT6 1211 aaKnown RBP13.18□□□□□ -0.3
SRRM4-203ENST00000545224 SPATC1LQ9H0A9 340 aa13.18□□□□□ -0.3
SRRM4-203ENST00000545224 RAVER2Q9HCJ3 691 aaKnown RBP13.18□□□□□ -0.3
SRRM4-203ENST00000545224 NAP1L2Q9ULW6 460 aaPredicted RBP13.18□□□□□ -0.3
SRRM4-203ENST00000545224 TRIOBPQ9H2D6 2365 aa13.17□□□□□ -0.3
SRRM4-203ENST00000545224 PNMA6FA0A0J9YX94 578 aa13.17□□□□□ -0.3
SRRM4-203ENST00000545224 ZBED4O75132 1171 aa13.17□□□□□ -0.3
SRRM4-203ENST00000545224 ICAM1P05362 532 aa13.17□□□□□ -0.3
SRRM4-203ENST00000545224 EN2P19622 333 aaPredicted RBP13.17□□□□□ -0.3
SRRM4-203ENST00000545224 STAT3P40763 770 aa13.17□□□□□ -0.3
SRRM4-203ENST00000545224 FXR1P51114 621 aaKnown RBP eCLIP13.17□□□□□ -0.3
SRRM4-203ENST00000545224 IKQ13123 557 aaPredicted RBP13.17□□□□□ -0.3
SRRM4-203ENST00000545224 GPRC5AQ8NFJ5 357 aa13.17□□□□□ -0.3
SRRM4-203ENST00000545224 CD99L2Q8TCZ2 262 aa13.17□□□□□ -0.3
SRRM4-203ENST00000545224 PHKBQ93100 1093 aa13.17□□□□□ -0.3
SRRM4-203ENST00000545224 PAGR1Q9BTK6 254 aa13.17□□□□□ -0.3
SRRM4-203ENST00000545224 RNF26Q9BY78 433 aaPredicted RBP13.17□□□□□ -0.3
SRRM4-203ENST00000545224 PORCNQ9H237 461 aa13.17□□□□□ -0.3
SRRM4-203ENST00000545224 V9GY48 417 aaPredicted RBP13.17□□□□□ -0.3
SRRM4-203ENST00000545224 hCG_1642624A0A1W2PR95 340 aa13.16□□□□□ -0.3
SRRM4-203ENST00000545224 OPLAHO14841 1288 aa13.16□□□□□ -0.3
SRRM4-203ENST00000545224 FMNL1O95466 1100 aaPredicted RBP13.16□□□□□ -0.3
SRRM4-203ENST00000545224 TYW1BQ6NUM6 668 aa13.16□□□□□ -0.3
SRRM4-203ENST00000545224 CCDC174Q6PII3 467 aa13.16□□□□□ -0.3
SRRM4-203ENST00000545224 SAMD1Q6SPF0 538 aaPredicted RBP13.16□□□□□ -0.3
SRRM4-203ENST00000545224 CCDC83Q8IWF9 413 aa13.16□□□□□ -0.3
SRRM4-203ENST00000545224 CPXCR1Q8N123 301 aa13.16□□□□□ -0.3
SRRM4-203ENST00000545224 SHCBP1Q8NEM2 672 aa13.16□□□□□ -0.3
SRRM4-203ENST00000545224 CLEC4DQ8WXI8 215 aa13.16□□□□□ -0.3
SRRM4-203ENST00000545224 TEX13BQ9BXU2 312 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms