RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 ASTN1O14525 1302 aa15.41■□□□□ 0.06
USP28-212ENST00000544750 PRRC2BQ5JSZ5 2229 aaKnown RBP15.4■□□□□ 0.06
USP28-212ENST00000544750 SCN5AQ14524 2016 aa15.4■□□□□ 0.06
USP28-212ENST00000544750 IGKV6D-41A0A0C4DH26 115 aa15.4■□□□□ 0.06
USP28-212ENST00000544750 F5H6K3 240 aa15.4■□□□□ 0.06
USP28-212ENST00000544750 NDUFB10O96000 172 aa15.4■□□□□ 0.06
USP28-212ENST00000544750 IFIT2P09913 472 aaKnown RBP15.4■□□□□ 0.06
USP28-212ENST00000544750 CYP2C18P33260 490 aa15.4■□□□□ 0.06
USP28-212ENST00000544750 MRPS5P82675 430 aaKnown RBP15.4■□□□□ 0.06
USP28-212ENST00000544750 KLRC3Q07444 240 aa15.4■□□□□ 0.06
USP28-212ENST00000544750 ARMCX2Q7L311 632 aa15.4■□□□□ 0.06
USP28-212ENST00000544750 SIRT2Q8IXJ6 389 aa15.4■□□□□ 0.06
USP28-212ENST00000544750 AMOTL1Q8IY63 956 aa15.4■□□□□ 0.06
USP28-212ENST00000544750 HAUS7Q99871 368 aa15.4■□□□□ 0.06
USP28-212ENST00000544750 PUS7LQ9H0K6 701 aaKnown RBP15.4■□□□□ 0.06
USP28-212ENST00000544750 SLC38A10Q9HBR0 1119 aa15.4■□□□□ 0.06
USP28-212ENST00000544750 YBX2Q9Y2T7 364 aaKnown RBP15.4■□□□□ 0.06
USP28-212ENST00000544750 SLC4A4Q9Y6R1 1079 aa15.4■□□□□ 0.06
USP28-212ENST00000544750 RAD21O60216 631 aa15.39■□□□□ 0.05
USP28-212ENST00000544750 RAB30Q15771 203 aa15.39■□□□□ 0.05
USP28-212ENST00000544750 SBK1Q52WX2 424 aa15.39■□□□□ 0.05
USP28-212ENST00000544750 GNASQ5JWF2 1037 aa15.39■□□□□ 0.05
USP28-212ENST00000544750 PANK1Q8TE04 598 aa15.39■□□□□ 0.05
USP28-212ENST00000544750 VWCEQ96DN2 955 aa15.39■□□□□ 0.05
USP28-212ENST00000544750 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.39■□□□□ 0.05
USP28-212ENST00000544750 NKX2-4Q9H2Z4 354 aa15.39■□□□□ 0.05
USP28-212ENST00000544750 SPC25Q9HBM1 224 aa15.39■□□□□ 0.05
USP28-212ENST00000544750 ARPP21Q9UBL0 812 aaPredicted RBP15.39■□□□□ 0.05
USP28-212ENST00000544750 MSRAQ9UJ68 235 aa15.39■□□□□ 0.05
USP28-212ENST00000544750 UMODL1Q5DID0 1318 aa15.39■□□□□ 0.05
USP28-212ENST00000544750 APBB1O00213 710 aa15.38■□□□□ 0.05
USP28-212ENST00000544750 TLR3O15455 904 aaKnown RBP15.38■□□□□ 0.05
USP28-212ENST00000544750 RPAP2Q8IXW5 612 aaPredicted RBP15.38■□□□□ 0.05
USP28-212ENST00000544750 CCDC144CPQ8IYA2 1237 aa15.38■□□□□ 0.05
USP28-212ENST00000544750 CPXCR1Q8N123 301 aa15.38■□□□□ 0.05
USP28-212ENST00000544750 CHST13Q8NET6 341 aa15.38■□□□□ 0.05
USP28-212ENST00000544750 MKL1Q969V6 931 aa15.38■□□□□ 0.05
USP28-212ENST00000544750 VTI1AQ96AJ9 217 aa15.38■□□□□ 0.05
USP28-212ENST00000544750 UHRF1Q96T88 793 aaPredicted RBP15.38■□□□□ 0.05
USP28-212ENST00000544750 RAVER2Q9HCJ3 691 aaKnown RBP15.38■□□□□ 0.05
USP28-212ENST00000544750 GNEQ9Y223 722 aaKnown RBP15.38■□□□□ 0.05
USP28-212ENST00000544750 GRIN2DO15399 1336 aa15.38■□□□□ 0.05
USP28-212ENST00000544750 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.37■□□□□ 0.05
USP28-212ENST00000544750 ZBED4O75132 1171 aa15.37■□□□□ 0.05
USP28-212ENST00000544750 FGBP02675 491 aa15.37■□□□□ 0.05
USP28-212ENST00000544750 OAZ1P54368 228 aa15.37■□□□□ 0.05
USP28-212ENST00000544750 BEX3Q00994 111 aa15.37■□□□□ 0.05
USP28-212ENST00000544750 CCDC85BQ15834 202 aaPredicted RBP15.37■□□□□ 0.05
USP28-212ENST00000544750 ANKRD35Q8N283 1001 aa15.37■□□□□ 0.05
USP28-212ENST00000544750 FAM133AQ8N9E0 248 aa15.37■□□□□ 0.05
USP28-212ENST00000544750 DDRGK1Q96HY6 314 aa15.37■□□□□ 0.05
USP28-212ENST00000544750 STRBPQ96SI9 672 aaKnown RBP15.37■□□□□ 0.05
USP28-212ENST00000544750 FBXO40Q9UH90 709 aa15.37■□□□□ 0.05
USP28-212ENST00000544750 GSG1L2A8MUP6 293 aa15.36■□□□□ 0.05
USP28-212ENST00000544750 RAB11FIP3O75154 756 aa15.36■□□□□ 0.05
USP28-212ENST00000544750 BMP1P13497 986 aa15.36■□□□□ 0.05
USP28-212ENST00000544750 IGFBP4P22692 258 aa15.36■□□□□ 0.05
USP28-212ENST00000544750 PLA2G5P39877 138 aa15.36■□□□□ 0.05
USP28-212ENST00000544750 CNTN2Q02246 1040 aa15.36■□□□□ 0.05
USP28-212ENST00000544750 NOC4LQ9BVI4 516 aaKnown RBP15.36■□□□□ 0.05
USP28-212ENST00000544750 SLC28A3Q9HAS3 691 aa15.36■□□□□ 0.05
USP28-212ENST00000544750 TET1Q8NFU7 2136 aa15.35■□□□□ 0.05
USP28-212ENST00000544750 PTPRSQ13332 1948 aa15.35■□□□□ 0.05
USP28-212ENST00000544750 SCN10AQ9Y5Y9 1956 aa15.35■□□□□ 0.05
USP28-212ENST00000544750 GIMAP6Q6P9H5 292 aa15.35■□□□□ 0.05
USP28-212ENST00000544750 CXCL17Q6UXB2 119 aa15.35■□□□□ 0.05
USP28-212ENST00000544750 OTOP2Q7RTS6 562 aa15.35■□□□□ 0.05
USP28-212ENST00000544750 KIFC2Q96AC6 838 aa15.35■□□□□ 0.05
USP28-212ENST00000544750 WNT8AQ9H1J5 351 aa15.35■□□□□ 0.05
USP28-212ENST00000544750 MTIF3Q9H2K0 278 aaKnown RBP15.35■□□□□ 0.05
USP28-212ENST00000544750 HIPK3Q9H422 1215 aa15.35■□□□□ 0.05
USP28-212ENST00000544750 CLIP2Q9UDT6 1046 aa15.35■□□□□ 0.05
USP28-212ENST00000544750 FEM1BQ9UK73 627 aa15.35■□□□□ 0.05
USP28-212ENST00000544750 SYNPO2Q9UMS6 1093 aa15.35■□□□□ 0.05
USP28-212ENST00000544750 SOWAHBA6NEL2 793 aa15.34■□□□□ 0.05
USP28-212ENST00000544750 CABYRO75952 493 aa15.34■□□□□ 0.05
USP28-212ENST00000544750 PTGS1P23219 599 aa15.34■□□□□ 0.05
USP28-212ENST00000544750 SLC4A3P48751 1232 aa15.34■□□□□ 0.05
USP28-212ENST00000544750 TNFAIP2Q03169 654 aa15.34■□□□□ 0.05
USP28-212ENST00000544750 ITGA7Q13683 1181 aa15.34■□□□□ 0.05
USP28-212ENST00000544750 ZSCAN25Q6NSZ9 544 aa15.34■□□□□ 0.05
USP28-212ENST00000544750 GMCL1P1Q8NEA9 526 aa15.34■□□□□ 0.05
USP28-212ENST00000544750 CEP95Q96GE4 821 aa15.34■□□□□ 0.05
USP28-212ENST00000544750 SEZ6LQ9BYH1 1024 aa15.34■□□□□ 0.05
USP28-212ENST00000544750 MKNK2Q9HBH9 465 aa15.34■□□□□ 0.05
USP28-212ENST00000544750 ZBTB40Q9NUA8 1239 aa15.34■□□□□ 0.05
USP28-212ENST00000544750 MTMR4Q9NYA4 1195 aa15.34■□□□□ 0.05
USP28-212ENST00000544750 TRIP12Q14669 1992 aaPredicted RBP15.34■□□□□ 0.05
USP28-212ENST00000544750 ZNF536O15090 1300 aa15.34■□□□□ 0.05
USP28-212ENST00000544750 TANC1Q9C0D5 1861 aa15.33■□□□□ 0.05
USP28-212ENST00000544750 B4GALT4O60513 344 aa15.33■□□□□ 0.04
USP28-212ENST00000544750 HMMRO75330 724 aa15.33■□□□□ 0.04
USP28-212ENST00000544750 FDX1P10109 184 aa15.33■□□□□ 0.04
USP28-212ENST00000544750 POU3F3P20264 500 aaPredicted RBP15.33■□□□□ 0.04
USP28-212ENST00000544750 RABGGTBP53611 331 aa15.33■□□□□ 0.04
USP28-212ENST00000544750 CCL23P55773 120 aa15.33■□□□□ 0.04
USP28-212ENST00000544750 FSCN1Q16658 493 aaKnown RBP15.33■□□□□ 0.04
USP28-212ENST00000544750 TLK2Q86UE8 772 aa15.33■□□□□ 0.04
USP28-212ENST00000544750 AGBL1Q96MI9 1066 aa15.33■□□□□ 0.04
USP28-212ENST00000544750 NECAB3Q96P71 396 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms