RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 PDE4BQ07343 736 aa26.93■■□□□ 1.9
CDKN3-207ENST00000543789 CCDC144BQ3MJ40 725 aa26.93■■□□□ 1.9
CDKN3-207ENST00000543789 NEDD1Q8NHV4 660 aa26.93■■□□□ 1.9
CDKN3-207ENST00000543789 COL11A1P12107 1806 aaPredicted RBP26.93■■□□□ 1.9
CDKN3-207ENST00000543789 MROH7Q68CQ1 1323 aa26.92■■□□□ 1.9
CDKN3-207ENST00000543789 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.92■■□□□ 1.9
CDKN3-207ENST00000543789 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.92■■□□□ 1.9
CDKN3-207ENST00000543789 ASGR1P07306 291 aa26.92■■□□□ 1.9
CDKN3-207ENST00000543789 SLC3A2P08195 630 aaKnown RBP26.92■■□□□ 1.9
CDKN3-207ENST00000543789 ARMCX2Q7L311 632 aa26.92■■□□□ 1.9
CDKN3-207ENST00000543789 FGD4Q96M96 766 aa26.92■■□□□ 1.9
CDKN3-207ENST00000543789 ADCY6O43306 1168 aa26.91■■□□□ 1.9
CDKN3-207ENST00000543789 FOSL2P15408 326 aa26.91■■□□□ 1.9
CDKN3-207ENST00000543789 CDK7P50613 346 aa26.91■■□□□ 1.9
CDKN3-207ENST00000543789 GJA9P57773 515 aa26.91■■□□□ 1.9
CDKN3-207ENST00000543789 IRX5P78411 483 aaPredicted RBP26.91■■□□□ 1.9
CDKN3-207ENST00000543789 UPF3AQ9H1J1 476 aaKnown RBP26.91■■□□□ 1.9
CDKN3-207ENST00000543789 TBX21Q9UL17 535 aa26.91■■□□□ 1.9
CDKN3-207ENST00000543789 TMEM232C9JQI7 657 aa26.9■■□□□ 1.9
CDKN3-207ENST00000543789 TFAP4Q01664 338 aa26.9■■□□□ 1.9
CDKN3-207ENST00000543789 GNASQ5JWF2 1037 aa26.9■■□□□ 1.9
CDKN3-207ENST00000543789 CCDC144CPQ8IYA2 1237 aa26.9■■□□□ 1.9
CDKN3-207ENST00000543789 CHURC1Q8WUH1 139 aa26.9■■□□□ 1.9
CDKN3-207ENST00000543789 SEC62Q99442 399 aaKnown RBP26.9■■□□□ 1.9
CDKN3-207ENST00000543789 HOMER2Q9NSB8 354 aa26.9■■□□□ 1.9
CDKN3-207ENST00000543789 ISY1Q9ULR0 285 aaKnown RBP26.9■■□□□ 1.9
CDKN3-207ENST00000543789 GREB1LQ9C091 1923 aaPredicted RBP26.89■■□□□ 1.9
CDKN3-207ENST00000543789 ARVCFO00192 962 aa26.89■■□□□ 1.9
CDKN3-207ENST00000543789 ERC2O15083 957 aa26.89■■□□□ 1.9
CDKN3-207ENST00000543789 MFSD5Q6N075 450 aa26.89■■□□□ 1.9
CDKN3-207ENST00000543789 NAPBQ9H115 298 aa26.89■■□□□ 1.9
CDKN3-207ENST00000543789 ACAD9Q9H845 621 aa26.89■■□□□ 1.9
CDKN3-207ENST00000543789 TTC41PQ6P2S7 1318 aa26.89■■□□□ 1.89
CDKN3-207ENST00000543789 PLIN4Q96Q06 1357 aa26.88■■□□□ 1.89
CDKN3-207ENST00000543789 A0A0U1RQG5 324 aaPredicted RBP26.88■■□□□ 1.89
CDKN3-207ENST00000543789 STAT2P52630 851 aa26.88■■□□□ 1.89
CDKN3-207ENST00000543789 CNTN2Q02246 1040 aa26.88■■□□□ 1.89
CDKN3-207ENST00000543789 PPARAQ07869 468 aa26.88■■□□□ 1.89
CDKN3-207ENST00000543789 FAM160B2Q86V87 743 aa26.88■■□□□ 1.89
CDKN3-207ENST00000543789 STAG1Q8WVM7 1258 aa26.88■■□□□ 1.89
CDKN3-207ENST00000543789 MYH7P12883 1935 aa26.87■■□□□ 1.89
CDKN3-207ENST00000543789 PPIGQ13427 754 aaKnown RBP eCLIP26.87■■□□□ 1.89
CDKN3-207ENST00000543789 CCDC174Q6PII3 467 aa26.87■■□□□ 1.89
CDKN3-207ENST00000543789 FAM133AQ8N9E0 248 aa26.87■■□□□ 1.89
CDKN3-207ENST00000543789 GMCL1Q96IK5 515 aa26.87■■□□□ 1.89
CDKN3-207ENST00000543789 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.87■■□□□ 1.89
CDKN3-207ENST00000543789 KATNBL1Q9H079 304 aa26.87■■□□□ 1.89
CDKN3-207ENST00000543789 DNAJB2P25686 324 aa26.86■■□□□ 1.89
CDKN3-207ENST00000543789 SLC1A4P43007 532 aa26.86■■□□□ 1.89
CDKN3-207ENST00000543789 NKX3-2P78367 333 aa26.86■■□□□ 1.89
CDKN3-207ENST00000543789 IKQ13123 557 aaPredicted RBP26.86■■□□□ 1.89
CDKN3-207ENST00000543789 GRIN2CQ14957 1233 aa26.86■■□□□ 1.89
CDKN3-207ENST00000543789 PPP4R3BQ5MIZ7 849 aa26.86■■□□□ 1.89
CDKN3-207ENST00000543789 NOL8Q76FK4 1167 aaKnown RBP26.86■■□□□ 1.89
CDKN3-207ENST00000543789 AGBL1Q96MI9 1066 aa26.86■■□□□ 1.89
CDKN3-207ENST00000543789 FSD1Q9BTV5 496 aa26.86■■□□□ 1.89
CDKN3-207ENST00000543789 PLXNA1Q9UIW2 1896 aa26.85■■□□□ 1.89
CDKN3-207ENST00000543789 CTAGE5O15320 804 aa26.85■■□□□ 1.89
CDKN3-207ENST00000543789 MCCP23508 829 aa26.85■■□□□ 1.89
CDKN3-207ENST00000543789 TNFAIP2Q03169 654 aa26.85■■□□□ 1.89
CDKN3-207ENST00000543789 TKFCQ3LXA3 575 aa26.85■■□□□ 1.89
CDKN3-207ENST00000543789 ZMYM1Q5SVZ6 1142 aa26.85■■□□□ 1.89
CDKN3-207ENST00000543789 TMEM199Q8N511 208 aa26.85■■□□□ 1.89
CDKN3-207ENST00000543789 PI4K2BQ8TCG2 481 aa26.85■■□□□ 1.89
CDKN3-207ENST00000543789 CHMP4CQ96CF2 233 aa26.85■■□□□ 1.89
CDKN3-207ENST00000543789 A1CFQ9NQ94 594 aaKnown RBP26.85■■□□□ 1.89
CDKN3-207ENST00000543789 RNF146Q9NTX7 359 aa26.85■■□□□ 1.89
CDKN3-207ENST00000543789 ZNF536O15090 1300 aa26.85■■□□□ 1.89
CDKN3-207ENST00000543789 ASB14A6NK59 587 aa26.84■■□□□ 1.89
CDKN3-207ENST00000543789 TLR3O15455 904 aaKnown RBP26.84■■□□□ 1.89
CDKN3-207ENST00000543789 PLA2G6O60733 806 aa26.84■■□□□ 1.89
CDKN3-207ENST00000543789 TMEM240Q5SV17 173 aa26.84■■□□□ 1.89
CDKN3-207ENST00000543789 C16orf59Q7L2K0 433 aa26.84■■□□□ 1.89
CDKN3-207ENST00000543789 FAM126BQ8IXS8 530 aa26.84■■□□□ 1.89
CDKN3-207ENST00000543789 TIFAQ96CG3 184 aa26.84■■□□□ 1.89
CDKN3-207ENST00000543789 TRERF1Q96PN7 1200 aa26.84■■□□□ 1.89
CDKN3-207ENST00000543789 ZNF576Q9H609 170 aa26.84■■□□□ 1.89
CDKN3-207ENST00000543789 CDH23Q9H251 3354 aa26.83■■□□□ 1.89
CDKN3-207ENST00000543789 EYSQ5T1H1 3165 aa26.83■■□□□ 1.89
CDKN3-207ENST00000543789 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.83■■□□□ 1.89
CDKN3-207ENST00000543789 SOWAHBA6NEL2 793 aa26.83■■□□□ 1.89
CDKN3-207ENST00000543789 CSF2RAP15509 400 aa26.83■■□□□ 1.89
CDKN3-207ENST00000543789 STX8Q9UNK0 236 aa26.83■■□□□ 1.89
CDKN3-207ENST00000543789 ALAS1P13196 640 aa26.82■■□□□ 1.88
CDKN3-207ENST00000543789 BEX3Q00994 111 aa26.82■■□□□ 1.88
CDKN3-207ENST00000543789 RCSD1Q6JBY9 416 aa26.82■■□□□ 1.88
CDKN3-207ENST00000543789 KCTD1Q719H9 257 aa26.82■■□□□ 1.88
CDKN3-207ENST00000543789 OTUD7AQ8TE49 926 aaPredicted RBP26.82■■□□□ 1.88
CDKN3-207ENST00000543789 VCANP13611 3396 aa26.81■■□□□ 1.88
CDKN3-207ENST00000543789 TSPY2A6NKD2 308 aa26.81■■□□□ 1.88
CDKN3-207ENST00000543789 CCDC129Q6ZRS4 1044 aa26.81■■□□□ 1.88
CDKN3-207ENST00000543789 PPP1R12CQ9BZL4 782 aa26.81■■□□□ 1.88
CDKN3-207ENST00000543789 GNEQ9Y223 722 aaKnown RBP26.81■■□□□ 1.88
CDKN3-207ENST00000543789 CABYRO75952 493 aa26.8■■□□□ 1.88
CDKN3-207ENST00000543789 CD4P01730 458 aa26.8■■□□□ 1.88
CDKN3-207ENST00000543789 ACRP10323 421 aa26.8■■□□□ 1.88
CDKN3-207ENST00000543789 RASIP1Q5U651 963 aa26.8■■□□□ 1.88
CDKN3-207ENST00000543789 CXCL17Q6UXB2 119 aa26.8■■□□□ 1.88
CDKN3-207ENST00000543789 ZNF365Q70YC5 407 aa26.8■■□□□ 1.88
CDKN3-207ENST00000543789 AP5M1Q9H0R1 490 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms