RNA–Protein interactions for RNA: ENST00000543428.5

PSME3-204, Transcript of proteasome activator subunit 3, humanhuman

TSL 2

Gene PSME3, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-204ENST00000543428 LRRC41Q15345 812 aa25.29■■□□□ 1.64
PSME3-204ENST00000543428 TKFCQ3LXA3 575 aa25.29■■□□□ 1.64
PSME3-204ENST00000543428 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.29■■□□□ 1.64
PSME3-204ENST00000543428 RASGRP2Q7LDG7 609 aa25.29■■□□□ 1.64
PSME3-204ENST00000543428 TBC1D10CQ8IV04 446 aa25.29■■□□□ 1.64
PSME3-204ENST00000543428 GDF15Q99988 308 aa25.29■■□□□ 1.64
PSME3-204ENST00000543428 TMEM47Q9BQJ4 181 aa25.29■■□□□ 1.64
PSME3-204ENST00000543428 RNF146Q9NTX7 359 aa25.29■■□□□ 1.64
PSME3-204ENST00000543428 RANBP2P49792 3224 aaKnown RBP25.28■■□□□ 1.64
PSME3-204ENST00000543428 ALAS1P13196 640 aa25.28■■□□□ 1.64
PSME3-204ENST00000543428 SNAP25P60880 206 aa25.28■■□□□ 1.64
PSME3-204ENST00000543428 ZNF467Q7Z7K2 595 aaPredicted RBP25.28■■□□□ 1.64
PSME3-204ENST00000543428 RNF180Q86T96 592 aa25.28■■□□□ 1.64
PSME3-204ENST00000543428 ESR2Q92731 530 aa25.28■■□□□ 1.64
PSME3-204ENST00000543428 ZHX1Q9UKY1 873 aaPredicted RBP25.28■■□□□ 1.64
PSME3-204ENST00000543428 ZNF865P0CJ78 1059 aaPredicted RBP25.27■■□□□ 1.64
PSME3-204ENST00000543428 ADCYAP1R1P41586 468 aa25.27■■□□□ 1.64
PSME3-204ENST00000543428 MAGEA10P43363 369 aaPredicted RBP25.27■■□□□ 1.64
PSME3-204ENST00000543428 MAMDC4Q6UXC1 1216 aa25.27■■□□□ 1.64
PSME3-204ENST00000543428 TTC14Q96N46 770 aa25.27■■□□□ 1.64
PSME3-204ENST00000543428 TRERF1Q96PN7 1200 aa25.27■■□□□ 1.64
PSME3-204ENST00000543428 FAM184BQ9ULE4 1060 aa25.27■■□□□ 1.64
PSME3-204ENST00000543428 ZNF536O15090 1300 aa25.27■■□□□ 1.64
PSME3-204ENST00000543428 POTEB2H3BUK9 544 aa25.26■■□□□ 1.63
PSME3-204ENST00000543428 SNAI1O95863 264 aaPredicted RBP25.26■■□□□ 1.63
PSME3-204ENST00000543428 PGK1P00558 417 aa25.26■■□□□ 1.63
PSME3-204ENST00000543428 BMP8BP34820 402 aa25.26■■□□□ 1.63
PSME3-204ENST00000543428 RTP1P59025 263 aa25.26■■□□□ 1.63
PSME3-204ENST00000543428 FERMT2Q96AC1 680 aa25.26■■□□□ 1.63
PSME3-204ENST00000543428 GPCPD1Q9NPB8 672 aa25.26■■□□□ 1.63
PSME3-204ENST00000543428 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.26■■□□□ 1.63
PSME3-204ENST00000543428 PCDH10Q9P2E7 1040 aa25.26■■□□□ 1.63
PSME3-204ENST00000543428 PRKAG2Q9UGJ0 569 aa25.26■■□□□ 1.63
PSME3-204ENST00000543428 CCPG1Q9ULG6 757 aa25.26■■□□□ 1.63
PSME3-204ENST00000543428 ATP11BQ9Y2G3 1177 aa25.26■■□□□ 1.63
PSME3-204ENST00000543428 FRMPD2Q68DX3 1309 aaPredicted RBP25.26■■□□□ 1.63
PSME3-204ENST00000543428 PDE4AP27815 886 aa25.25■■□□□ 1.63
PSME3-204ENST00000543428 SLC16A2P36021 539 aa25.25■■□□□ 1.63
PSME3-204ENST00000543428 TTBK2Q6IQ55 1244 aa25.25■■□□□ 1.63
PSME3-204ENST00000543428 SLC39A5Q6ZMH5 540 aa25.25■■□□□ 1.63
PSME3-204ENST00000543428 DSCC1Q9BVC3 393 aa25.25■■□□□ 1.63
PSME3-204ENST00000543428 CTNNA3Q9UI47 895 aa25.25■■□□□ 1.63
PSME3-204ENST00000543428 NEDD4P46934 1319 aa25.25■■□□□ 1.63
PSME3-204ENST00000543428 DNAH12Q6ZR08 3092 aa25.25■■□□□ 1.63
PSME3-204ENST00000543428 CNTN2Q02246 1040 aa25.24■■□□□ 1.63
PSME3-204ENST00000543428 IMMTQ16891 758 aaKnown RBP25.24■■□□□ 1.63
PSME3-204ENST00000543428 TTC22Q5TAA0 569 aa25.24■■□□□ 1.63
PSME3-204ENST00000543428 SYDE2Q5VT97 1194 aa25.24■■□□□ 1.63
PSME3-204ENST00000543428 LENG1Q96BZ8 264 aaPredicted RBP25.24■■□□□ 1.63
PSME3-204ENST00000543428 UBE2OQ9C0C9 1292 aaKnown RBP25.24■■□□□ 1.63
PSME3-204ENST00000543428 A1CFQ9NQ94 594 aaKnown RBP25.24■■□□□ 1.63
PSME3-204ENST00000543428 LAMA4Q16363 1823 aa25.23■■□□□ 1.63
PSME3-204ENST00000543428 NT5C2P49902 561 aa25.23■■□□□ 1.63
PSME3-204ENST00000543428 ACVR2BQ13705 512 aa25.23■■□□□ 1.63
PSME3-204ENST00000543428 ARMCX2Q7L311 632 aa25.23■■□□□ 1.63
PSME3-204ENST00000543428 IQCA1Q86XH1 822 aa25.23■■□□□ 1.63
PSME3-204ENST00000543428 LBHD1Q9BQE6 289 aaPredicted RBP25.23■■□□□ 1.63
PSME3-204ENST00000543428 ZKSCAN3Q9BRR0 538 aa25.23■■□□□ 1.63
PSME3-204ENST00000543428 ABHD16BQ9H3Z7 469 aa25.23■■□□□ 1.63
PSME3-204ENST00000543428 MCM3APO60318 1980 aa25.23■■□□□ 1.63
PSME3-204ENST00000543428 ICAM1P05362 532 aa25.22■■□□□ 1.63
PSME3-204ENST00000543428 PDHBP11177 359 aa25.22■■□□□ 1.63
PSME3-204ENST00000543428 MDM2Q00987 491 aaPredicted RBP25.22■■□□□ 1.63
PSME3-204ENST00000543428 CCDC178Q5BJE1 867 aa25.22■■□□□ 1.63
PSME3-204ENST00000543428 BTNL9Q6UXG8 535 aa25.22■■□□□ 1.63
PSME3-204ENST00000543428 CCDC144CPQ8IYA2 1237 aa25.22■■□□□ 1.63
PSME3-204ENST00000543428 FGD4Q96M96 766 aa25.22■■□□□ 1.63
PSME3-204ENST00000543428 RANBP17Q9H2T7 1088 aaKnown RBP25.22■■□□□ 1.63
PSME3-204ENST00000543428 PHF24Q9UPV7 400 aa25.22■■□□□ 1.63
PSME3-204ENST00000543428 KDM4AO75164 1064 aa25.21■■□□□ 1.63
PSME3-204ENST00000543428 MUM1L1Q5H9M0 696 aa25.21■■□□□ 1.63
PSME3-204ENST00000543428 NSMFQ6X4W1 530 aa25.21■■□□□ 1.63
PSME3-204ENST00000543428 FAM133AQ8N9E0 248 aa25.21■■□□□ 1.63
PSME3-204ENST00000543428 SYNRGQ9UMZ2 1314 aa25.2■■□□□ 1.62
PSME3-204ENST00000543428 GSPT1P15170 499 aaKnown RBP25.2■■□□□ 1.62
PSME3-204ENST00000543428 TRIM60Q495X7 471 aa25.2■■□□□ 1.62
PSME3-204ENST00000543428 DGKHQ86XP1 1220 aa25.2■■□□□ 1.62
PSME3-204ENST00000543428 SPC25Q9HBM1 224 aa25.2■■□□□ 1.62
PSME3-204ENST00000543428 ASB14A6NK59 587 aa25.19■■□□□ 1.62
PSME3-204ENST00000543428 B4E1Z4 1266 aa25.19■■□□□ 1.62
PSME3-204ENST00000543428 DUSP11O75319 330 aaKnown RBP25.19■■□□□ 1.62
PSME3-204ENST00000543428 ZNF543Q08ER8 600 aa25.19■■□□□ 1.62
PSME3-204ENST00000543428 CCDC144BQ3MJ40 725 aa25.19■■□□□ 1.62
PSME3-204ENST00000543428 TDHQ8IZJ6 230 aa25.19■■□□□ 1.62
PSME3-204ENST00000543428 RUFY2Q8WXA3 655 aa25.19■■□□□ 1.62
PSME3-204ENST00000543428 KRT23Q9C075 422 aa25.19■■□□□ 1.62
PSME3-204ENST00000543428 PRDM5Q9NQX1 630 aaPredicted RBP25.19■■□□□ 1.62
PSME3-204ENST00000543428 CYP39A1Q9NYL5 469 aa25.19■■□□□ 1.62
PSME3-204ENST00000543428 SOWAHBA6NEL2 793 aa25.18■■□□□ 1.62
PSME3-204ENST00000543428 ADAMTS4O75173 837 aa25.18■■□□□ 1.62
PSME3-204ENST00000543428 SNX17Q15036 470 aa25.18■■□□□ 1.62
PSME3-204ENST00000543428 TSEN34Q9BSV6 310 aaKnown RBP25.18■■□□□ 1.62
PSME3-204ENST00000543428 KAT14Q9H8E8 782 aa25.18■■□□□ 1.62
PSME3-204ENST00000543428 CNNM2Q9H8M5 875 aa25.18■■□□□ 1.62
PSME3-204ENST00000543428 PNMA2Q9UL42 364 aa25.18■■□□□ 1.62
PSME3-204ENST00000543428 A0A1W2PQ45 241 aaPredicted RBP25.17■■□□□ 1.62
PSME3-204ENST00000543428 A0A1W2PQY0 241 aa25.17■■□□□ 1.62
PSME3-204ENST00000543428 C6orf222P0C671 652 aaPredicted RBP25.17■■□□□ 1.62
PSME3-204ENST00000543428 GPATCH4Q5T3I0 446 aaKnown RBP25.17■■□□□ 1.62
PSME3-204ENST00000543428 NOL8Q76FK4 1167 aaKnown RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms