RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 CLTBP09497 229 aa23.28■■□□□ 1.32
CACNA1C-230ENST00000543114 MCCP23508 829 aa23.28■■□□□ 1.32
CACNA1C-230ENST00000543114 ITGB8P26012 769 aa23.28■■□□□ 1.32
CACNA1C-230ENST00000543114 PDE1AP54750 535 aa23.28■■□□□ 1.32
CACNA1C-230ENST00000543114 IRX5P78411 483 aaPredicted RBP23.28■■□□□ 1.32
CACNA1C-230ENST00000543114 HDAC1Q13547 482 aaPredicted RBP23.28■■□□□ 1.32
CACNA1C-230ENST00000543114 ACVR2BQ13705 512 aa23.28■■□□□ 1.32
CACNA1C-230ENST00000543114 SHHQ15465 462 aa23.28■■□□□ 1.32
CACNA1C-230ENST00000543114 ARMCX2Q7L311 632 aa23.28■■□□□ 1.32
CACNA1C-230ENST00000543114 KLHDC9Q8NEP7 349 aa23.28■■□□□ 1.32
CACNA1C-230ENST00000543114 STXBP5LQ9Y2K9 1186 aa23.28■■□□□ 1.32
CACNA1C-230ENST00000543114 UNC80Q8N2C7 3258 aa23.28■■□□□ 1.32
CACNA1C-230ENST00000543114 EYSQ5T1H1 3165 aa23.28■■□□□ 1.32
CACNA1C-230ENST00000543114 PQBP1O60828 265 aaKnown RBP23.27■■□□□ 1.32
CACNA1C-230ENST00000543114 ACLYP53396 1101 aa23.27■■□□□ 1.32
CACNA1C-230ENST00000543114 CNTN2Q02246 1040 aa23.27■■□□□ 1.32
CACNA1C-230ENST00000543114 IKQ13123 557 aaPredicted RBP23.27■■□□□ 1.32
CACNA1C-230ENST00000543114 CCSAPQ6IQ19 270 aaPredicted RBP23.27■■□□□ 1.32
CACNA1C-230ENST00000543114 KCTD1Q719H9 257 aa23.27■■□□□ 1.32
CACNA1C-230ENST00000543114 FAM160B2Q86V87 743 aa23.27■■□□□ 1.32
CACNA1C-230ENST00000543114 STAG1Q8WVM7 1258 aa23.27■■□□□ 1.32
CACNA1C-230ENST00000543114 FAM227BQ96M60 508 aa23.27■■□□□ 1.32
CACNA1C-230ENST00000543114 AGBL1Q96MI9 1066 aa23.27■■□□□ 1.32
CACNA1C-230ENST00000543114 ACAD9Q9H845 621 aa23.27■■□□□ 1.32
CACNA1C-230ENST00000543114 ANAPC4Q9UJX5 808 aa23.27■■□□□ 1.32
CACNA1C-230ENST00000543114 A0A0D9SFI3 127 aa23.26■■□□□ 1.31
CACNA1C-230ENST00000543114 POTEB2H3BUK9 544 aa23.26■■□□□ 1.31
CACNA1C-230ENST00000543114 DUSP11O75319 330 aaKnown RBP23.26■■□□□ 1.31
CACNA1C-230ENST00000543114 FDX1P10109 184 aa23.26■■□□□ 1.31
CACNA1C-230ENST00000543114 PPP4R3BQ5MIZ7 849 aa23.26■■□□□ 1.31
CACNA1C-230ENST00000543114 CCDC144CPQ8IYA2 1237 aa23.26■■□□□ 1.31
CACNA1C-230ENST00000543114 CHURC1Q8WUH1 139 aa23.26■■□□□ 1.31
CACNA1C-230ENST00000543114 TSEN34Q9BSV6 310 aaKnown RBP23.26■■□□□ 1.31
CACNA1C-230ENST00000543114 ABHD16BQ9H3Z7 469 aa23.26■■□□□ 1.31
CACNA1C-230ENST00000543114 A1CFQ9NQ94 594 aaKnown RBP23.26■■□□□ 1.31
CACNA1C-230ENST00000543114 STARD7Q9NQZ5 370 aa23.26■■□□□ 1.31
CACNA1C-230ENST00000543114 RNF146Q9NTX7 359 aa23.26■■□□□ 1.31
CACNA1C-230ENST00000543114 MOXD2PA6NHM9 499 aa23.25■■□□□ 1.31
CACNA1C-230ENST00000543114 CST5P28325 142 aaPredicted RBP23.25■■□□□ 1.31
CACNA1C-230ENST00000543114 SNAP25P60880 206 aa23.25■■□□□ 1.31
CACNA1C-230ENST00000543114 KCNA10Q16322 511 aa23.25■■□□□ 1.31
CACNA1C-230ENST00000543114 CCDC144BQ3MJ40 725 aa23.25■■□□□ 1.31
CACNA1C-230ENST00000543114 FAM133AQ8N9E0 248 aa23.25■■□□□ 1.31
CACNA1C-230ENST00000543114 GUCD1Q96NT3 240 aa23.25■■□□□ 1.31
CACNA1C-230ENST00000543114 KATNBL1Q9H079 304 aa23.25■■□□□ 1.31
CACNA1C-230ENST00000543114 HELLSQ9NRZ9 838 aa23.25■■□□□ 1.31
CACNA1C-230ENST00000543114 KIAA0355O15063 1070 aa23.24■■□□□ 1.31
CACNA1C-230ENST00000543114 ORC4O43929 436 aa23.24■■□□□ 1.31
CACNA1C-230ENST00000543114 RANBP6O60518 1105 aaKnown RBP23.24■■□□□ 1.31
CACNA1C-230ENST00000543114 PLA2G6O60733 806 aa23.24■■□□□ 1.31
CACNA1C-230ENST00000543114 NOVP48745 357 aa23.24■■□□□ 1.31
CACNA1C-230ENST00000543114 FAM109BQ6ICB4 259 aaPredicted RBP23.24■■□□□ 1.31
CACNA1C-230ENST00000543114 FAM161BQ96MY7 647 aa23.24■■□□□ 1.31
CACNA1C-230ENST00000543114 PRR12Q9ULL5 1215 aa23.24■■□□□ 1.31
CACNA1C-230ENST00000543114 MTMR7Q9Y216 660 aa23.24■■□□□ 1.31
CACNA1C-230ENST00000543114 FGRP09769 529 aa23.23■■□□□ 1.31
CACNA1C-230ENST00000543114 C6orf222P0C671 652 aaPredicted RBP23.23■■□□□ 1.31
CACNA1C-230ENST00000543114 ALX1Q15699 326 aa23.23■■□□□ 1.31
CACNA1C-230ENST00000543114 RCSD1Q6JBY9 416 aa23.23■■□□□ 1.31
CACNA1C-230ENST00000543114 CCDC174Q6PII3 467 aa23.23■■□□□ 1.31
CACNA1C-230ENST00000543114 ANKRD33Q7Z3H0 272 aa23.23■■□□□ 1.31
CACNA1C-230ENST00000543114 ZNF589Q86UQ0 364 aaPredicted RBP23.23■■□□□ 1.31
CACNA1C-230ENST00000543114 NUP133Q8WUM0 1156 aa23.23■■□□□ 1.31
CACNA1C-230ENST00000543114 UPF3AQ9H1J1 476 aaKnown RBP23.23■■□□□ 1.31
CACNA1C-230ENST00000543114 ASTN1O14525 1302 aa23.23■■□□□ 1.31
CACNA1C-230ENST00000543114 ALAS1P13196 640 aa23.22■■□□□ 1.31
CACNA1C-230ENST00000543114 EPHB4P54760 987 aa23.22■■□□□ 1.31
CACNA1C-230ENST00000543114 FAAP100Q0VG06 881 aa23.22■■□□□ 1.31
CACNA1C-230ENST00000543114 TRERF1Q96PN7 1200 aa23.22■■□□□ 1.31
CACNA1C-230ENST00000543114 LNPKQ9C0E8 428 aa23.22■■□□□ 1.31
CACNA1C-230ENST00000543114 SOWAHBA6NEL2 793 aa23.21■■□□□ 1.31
CACNA1C-230ENST00000543114 FGAP02671 866 aa23.21■■□□□ 1.31
CACNA1C-230ENST00000543114 RAG1P15918 1043 aa23.21■■□□□ 1.31
CACNA1C-230ENST00000543114 GJA9P57773 515 aa23.21■■□□□ 1.31
CACNA1C-230ENST00000543114 NMIQ13287 307 aaPredicted RBP23.21■■□□□ 1.31
CACNA1C-230ENST00000543114 CCDC96Q2M329 555 aa23.21■■□□□ 1.31
CACNA1C-230ENST00000543114 TKFCQ3LXA3 575 aa23.21■■□□□ 1.31
CACNA1C-230ENST00000543114 MCMDC2Q4G0Z9 681 aa23.21■■□□□ 1.31
CACNA1C-230ENST00000543114 MUM1L1Q5H9M0 696 aa23.21■■□□□ 1.31
CACNA1C-230ENST00000543114 TOX2Q96NM4 488 aa23.21■■□□□ 1.31
CACNA1C-230ENST00000543114 TOMM22Q9NS69 142 aa23.21■■□□□ 1.31
CACNA1C-230ENST00000543114 TMEM39AQ9NV64 488 aa23.21■■□□□ 1.31
CACNA1C-230ENST00000543114 DDX49Q9Y6V7 483 aaKnown RBP23.21■■□□□ 1.31
CACNA1C-230ENST00000543114 ZMYM6O95789 1325 aa23.21■■□□□ 1.31
CACNA1C-230ENST00000543114 LAMA4Q16363 1823 aa23.21■■□□□ 1.31
CACNA1C-230ENST00000543114 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.2■■□□□ 1.3
CACNA1C-230ENST00000543114 CTAGE5O15320 804 aa23.2■■□□□ 1.3
CACNA1C-230ENST00000543114 ASGR1P07306 291 aa23.2■■□□□ 1.3
CACNA1C-230ENST00000543114 HSPD1P10809 573 aaKnown RBP23.2■■□□□ 1.3
CACNA1C-230ENST00000543114 RRP12Q5JTH9 1297 aaKnown RBP23.2■■□□□ 1.3
CACNA1C-230ENST00000543114 ZNF697Q5TEC3 545 aa23.2■■□□□ 1.3
CACNA1C-230ENST00000543114 DCAF4Q8WV16 495 aa23.2■■□□□ 1.3
CACNA1C-230ENST00000543114 GLT1D1Q96MS3 346 aa23.2■■□□□ 1.3
CACNA1C-230ENST00000543114 ELP1O95163 1332 aa23.19■■□□□ 1.3
CACNA1C-230ENST00000543114 PCSK9Q8NBP7 692 aaKnown RBP23.19■■□□□ 1.3
CACNA1C-230ENST00000543114 SPC25Q9HBM1 224 aa23.19■■□□□ 1.3
CACNA1C-230ENST00000543114 CYP39A1Q9NYL5 469 aa23.19■■□□□ 1.3
CACNA1C-230ENST00000543114 TBX21Q9UL17 535 aa23.19■■□□□ 1.3
CACNA1C-230ENST00000543114 CCPG1Q9ULG6 757 aa23.19■■□□□ 1.3
CACNA1C-230ENST00000543114 CCDC171Q6TFL3 1326 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms