RNA–Protein interactions for RNA: ENST00000542879.5

ZEB1-209, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 3,645 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-209ENST00000542879 MCM3P25205 808 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 TRAPPC10P48553 1259 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 PMS1P54277 932 aaKnown RBP6.31□□□□□ -1.4
ZEB1-209ENST00000542879 AFAP1L1Q8TED9 768 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 PIGBQ92521 554 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 RPGRIP1Q96KN7 1286 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 ZSCAN10Q96SZ4 725 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-209ENST00000542879 GUCA1BQ9UMX6 200 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 GDAQ9Y2T3 454 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 THRAP3Q9Y2W1 955 aaKnown RBP6.31□□□□□ -1.4
ZEB1-209ENST00000542879 MYH7BA7E2Y1 1941 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 PDE2AO00408 941 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-209ENST00000542879 ENC1O14682 589 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 CYP19A1P11511 503 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-209ENST00000542879 KCNA4P22459 653 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 UBXN1Q04323 297 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 NAALADL2Q58DX5 795 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 HSP90B2PQ58FF3 399 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 CTR9Q6PD62 1173 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 TOM1L2Q6ZVM7 507 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 AENQ8WTP8 325 aaKnown RBP6.31□□□□□ -1.4
ZEB1-209ENST00000542879 FAXDC2Q96IV6 333 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 UBAC1Q9BSL1 405 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 THAP9Q9H5L6 903 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 TMOD3Q9NYL9 352 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 TFR2Q9UP52 801 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 SAR1BQ9Y6B6 198 aa6.31□□□□□ -1.4
ZEB1-209ENST00000542879 V9GY48 417 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-209ENST00000542879 hCG_1642624A0A1W2PR95 340 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 ANO9A1A5B4 782 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 ERVV-1B6SEH8 477 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 PHACTR2O75167 634 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 DDAH1O94760 285 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 ATF3P18847 181 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 GUCY2CP25092 1073 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 EEF1GP26641 437 aaKnown RBP6.3□□□□□ -1.4
ZEB1-209ENST00000542879 KCNB1Q14721 858 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 NBPF20Q3BBV1 942 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 ARL6IP4Q66PJ3 421 aaKnown RBP6.3□□□□□ -1.4
ZEB1-209ENST00000542879 CCNI2Q6ZMN8 369 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-209ENST00000542879 FAM43BQ6ZT52 329 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-209ENST00000542879 BARGINQ6ZT62 677 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 ESR2Q92731 530 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 RIOK1Q9BRS2 568 aaKnown RBP6.3□□□□□ -1.4
ZEB1-209ENST00000542879 RMND1Q9NWS8 449 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 TRMT112Q9UI30 125 aaKnown RBP6.3□□□□□ -1.4
ZEB1-209ENST00000542879 ZNF804BA4D1E1 1349 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 TRIM49BA6NDI0 452 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 SRGAP2O75044 1071 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 STARD3NLO95772 234 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 SRGNP10124 158 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 BCAMP50895 628 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 SEMA3FQ13275 785 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 MAP9Q49MG5 647 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-209ENST00000542879 SRBD1Q8N5C6 995 aaKnown RBP6.3□□□□□ -1.4
ZEB1-209ENST00000542879 MIGA1Q8NAN2 632 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 RUBCNQ92622 972 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 LACRTQ9GZZ8 138 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.3□□□□□ -1.4
ZEB1-209ENST00000542879 ZNF330Q9Y3S2 320 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-209ENST00000542879 MYH4Q9Y623 1939 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 M0R2N6 131 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 CALM1P0DP23 149 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 CALM2P0DP24 149 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 CALM3P0DP25 149 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 LONP1P36776 959 aaKnown RBP6.3□□□□□ -1.4
ZEB1-209ENST00000542879 GGCXP38435 758 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 CDK17Q00537 523 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 AKAP17AQ02040 695 aaKnown RBP6.3□□□□□ -1.4
ZEB1-209ENST00000542879 ITIH3Q06033 890 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 CKAP4Q07065 602 aaKnown RBP6.3□□□□□ -1.4
ZEB1-209ENST00000542879 STIM1Q13586 685 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 TTI2Q6NXR4 508 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 LRRC15Q8TF66 581 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 SDR42E1Q8WUS8 393 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 RIN2Q8WYP3 895 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-209ENST00000542879 DUSP9Q99956 384 aaKnown RBP6.3□□□□□ -1.4
ZEB1-209ENST00000542879 SH3GL2Q99962 352 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 SELENOOQ9BVL4 669 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 TOMM22Q9NS69 142 aa6.3□□□□□ -1.4
ZEB1-209ENST00000542879 LUC7L2Q9Y383 392 aaKnown RBP6.3□□□□□ -1.4
ZEB1-209ENST00000542879 RHOBTB3O94955 611 aa6.29□□□□□ -1.4
ZEB1-209ENST00000542879 PCP11498 1178 aaKnown RBP6.29□□□□□ -1.4
ZEB1-209ENST00000542879 VEGFAP15692 232 aaPredicted RBP6.29□□□□□ -1.4
ZEB1-209ENST00000542879 CCDC122Q5T0U0 273 aa6.29□□□□□ -1.4
ZEB1-209ENST00000542879 CATIPQ7Z7H3 387 aa6.29□□□□□ -1.4
ZEB1-209ENST00000542879 CCDC170Q8IYT3 715 aa6.29□□□□□ -1.4
ZEB1-209ENST00000542879 MMGT1Q8N4V1 131 aa6.29□□□□□ -1.4
ZEB1-209ENST00000542879 ANKRD20A12PQ8NF67 263 aa6.29□□□□□ -1.4
ZEB1-209ENST00000542879 TATDN2Q93075 761 aa6.29□□□□□ -1.4
ZEB1-209ENST00000542879 JAKMIP2Q96AA8 810 aa6.29□□□□□ -1.4
ZEB1-209ENST00000542879 BRIP1Q9BX63 1249 aa6.29□□□□□ -1.4
ZEB1-209ENST00000542879 BRMS1Q9HCU9 246 aa6.29□□□□□ -1.4
ZEB1-209ENST00000542879 DISC1Q9NRI5 854 aa6.29□□□□□ -1.4
ZEB1-209ENST00000542879 SLAIN2Q9P270 581 aa6.29□□□□□ -1.4
ZEB1-209ENST00000542879 GRIN2DO15399 1336 aa6.29□□□□□ -1.4
ZEB1-209ENST00000542879 ZNF263O14978 683 aa6.29□□□□□ -1.4
ZEB1-209ENST00000542879 KRT83P78385 493 aa6.29□□□□□ -1.4
ZEB1-209ENST00000542879 PFKFB3Q16875 520 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms