RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 ITGB8P26012 769 aa14.09□□□□□ -0.15
PTPN6-219ENST00000542848 CST5P28325 142 aaPredicted RBP14.09□□□□□ -0.15
PTPN6-219ENST00000542848 PPARAQ07869 468 aa14.09□□□□□ -0.15
PTPN6-219ENST00000542848 FAAP100Q0VG06 881 aa14.09□□□□□ -0.15
PTPN6-219ENST00000542848 KCNA10Q16322 511 aa14.09□□□□□ -0.15
PTPN6-219ENST00000542848 LRRC47Q8N1G4 583 aaKnown RBP14.09□□□□□ -0.15
PTPN6-219ENST00000542848 PCSK9Q8NBP7 692 aaKnown RBP14.09□□□□□ -0.15
PTPN6-219ENST00000542848 LENG1Q96BZ8 264 aaPredicted RBP14.09□□□□□ -0.15
PTPN6-219ENST00000542848 GMCL1Q96IK5 515 aa14.09□□□□□ -0.15
PTPN6-219ENST00000542848 FGD4Q96M96 766 aa14.09□□□□□ -0.15
PTPN6-219ENST00000542848 FAM161BQ96MY7 647 aa14.09□□□□□ -0.15
PTPN6-219ENST00000542848 FSD1Q9BTV5 496 aa14.09□□□□□ -0.15
PTPN6-219ENST00000542848 SEMA6BQ9H3T3 888 aa14.09□□□□□ -0.15
PTPN6-219ENST00000542848 TMEM39AQ9NV64 488 aa14.09□□□□□ -0.15
PTPN6-219ENST00000542848 ELP1O95163 1332 aa14.09□□□□□ -0.15
PTPN6-219ENST00000542848 CDH23Q9H251 3354 aa14.09□□□□□ -0.15
PTPN6-219ENST00000542848 TMEM232C9JQI7 657 aa14.08□□□□□ -0.16
PTPN6-219ENST00000542848 MX1P20591 662 aa14.08□□□□□ -0.16
PTPN6-219ENST00000542848 STAT2P52630 851 aa14.08□□□□□ -0.16
PTPN6-219ENST00000542848 CCDC144BQ3MJ40 725 aa14.08□□□□□ -0.16
PTPN6-219ENST00000542848 ARMCX2Q7L311 632 aa14.08□□□□□ -0.16
PTPN6-219ENST00000542848 FAM160B2Q86V87 743 aa14.08□□□□□ -0.16
PTPN6-219ENST00000542848 STAG1Q8WVM7 1258 aa14.08□□□□□ -0.16
PTPN6-219ENST00000542848 UPF3AQ9H1J1 476 aaKnown RBP14.08□□□□□ -0.16
PTPN6-219ENST00000542848 SPC25Q9HBM1 224 aa14.08□□□□□ -0.16
PTPN6-219ENST00000542848 MROH7Q68CQ1 1323 aa14.08□□□□□ -0.16
PTPN6-219ENST00000542848 C6orf222P0C671 652 aaPredicted RBP14.07□□□□□ -0.16
PTPN6-219ENST00000542848 SLC1A4P43007 532 aa14.07□□□□□ -0.16
PTPN6-219ENST00000542848 GJA9P57773 515 aa14.07□□□□□ -0.16
PTPN6-219ENST00000542848 FPGSQ05932 587 aa14.07□□□□□ -0.16
PTPN6-219ENST00000542848 TKFCQ3LXA3 575 aa14.07□□□□□ -0.16
PTPN6-219ENST00000542848 OTUD7AQ8TE49 926 aaPredicted RBP14.07□□□□□ -0.16
PTPN6-219ENST00000542848 GLT1D1Q96MS3 346 aa14.07□□□□□ -0.16
PTPN6-219ENST00000542848 CDX2Q99626 313 aaPredicted RBP14.07□□□□□ -0.16
PTPN6-219ENST00000542848 ACAD9Q9H845 621 aa14.07□□□□□ -0.16
PTPN6-219ENST00000542848 LRRC37A2A6NM11 1700 aa14.07□□□□□ -0.16
PTPN6-219ENST00000542848 GBF1Q92538 1859 aa14.06□□□□□ -0.16
PTPN6-219ENST00000542848 MYH6P13533 1939 aa14.06□□□□□ -0.16
PTPN6-219ENST00000542848 ADCY6O43306 1168 aa14.06□□□□□ -0.16
PTPN6-219ENST00000542848 TIMP1P01033 207 aa14.06□□□□□ -0.16
PTPN6-219ENST00000542848 ASGR1P07306 291 aa14.06□□□□□ -0.16
PTPN6-219ENST00000542848 MCCP23508 829 aa14.06□□□□□ -0.16
PTPN6-219ENST00000542848 CDK7P50613 346 aa14.06□□□□□ -0.16
PTPN6-219ENST00000542848 EPHB4P54760 987 aa14.06□□□□□ -0.16
PTPN6-219ENST00000542848 NKX3-2P78367 333 aa14.06□□□□□ -0.16
PTPN6-219ENST00000542848 GNASQ5JWF2 1037 aa14.06□□□□□ -0.16
PTPN6-219ENST00000542848 RCSD1Q6JBY9 416 aa14.06□□□□□ -0.16
PTPN6-219ENST00000542848 CCDC144CPQ8IYA2 1237 aa14.06□□□□□ -0.16
PTPN6-219ENST00000542848 FAM133AQ8N9E0 248 aa14.06□□□□□ -0.16
PTPN6-219ENST00000542848 RNPC3Q96LT9 517 aaKnown RBP14.06□□□□□ -0.16
PTPN6-219ENST00000542848 KATNBL1Q9H079 304 aa14.06□□□□□ -0.16
PTPN6-219ENST00000542848 HOMER2Q9NSB8 354 aa14.06□□□□□ -0.16
PTPN6-219ENST00000542848 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.06□□□□□ -0.16
PTPN6-219ENST00000542848 ZNF536O15090 1300 aa14.06□□□□□ -0.16
PTPN6-219ENST00000542848 TMEM265A0A087WTH1 108 aa14.05□□□□□ -0.16
PTPN6-219ENST00000542848 MYADML2A6NDP7 307 aa14.05□□□□□ -0.16
PTPN6-219ENST00000542848 ASB14A6NK59 587 aa14.05□□□□□ -0.16
PTPN6-219ENST00000542848 TSPY2A6NKD2 308 aa14.05□□□□□ -0.16
PTPN6-219ENST00000542848 ARVCFO00192 962 aa14.05□□□□□ -0.16
PTPN6-219ENST00000542848 CNTN2Q02246 1040 aa14.05□□□□□ -0.16
PTPN6-219ENST00000542848 CTDSPL2Q05D32 466 aa14.05□□□□□ -0.16
PTPN6-219ENST00000542848 IKQ13123 557 aaPredicted RBP14.05□□□□□ -0.16
PTPN6-219ENST00000542848 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.05□□□□□ -0.16
PTPN6-219ENST00000542848 VTI1AQ96AJ9 217 aa14.05□□□□□ -0.16
PTPN6-219ENST00000542848 AGBL1Q96MI9 1066 aa14.05□□□□□ -0.16
PTPN6-219ENST00000542848 TRERF1Q96PN7 1200 aa14.05□□□□□ -0.16
PTPN6-219ENST00000542848 TTYH1Q9H313 450 aaPredicted RBP14.05□□□□□ -0.16
PTPN6-219ENST00000542848 A1CFQ9NQ94 594 aaKnown RBP14.05□□□□□ -0.16
PTPN6-219ENST00000542848 IL17RBQ9NRM6 502 aa14.05□□□□□ -0.16
PTPN6-219ENST00000542848 RNF146Q9NTX7 359 aa14.05□□□□□ -0.16
PTPN6-219ENST00000542848 ZBTB47Q9UFB7 747 aaPredicted RBP14.05□□□□□ -0.16
PTPN6-219ENST00000542848 ANAPC4Q9UJX5 808 aa14.05□□□□□ -0.16
PTPN6-219ENST00000542848 TBX21Q9UL17 535 aa14.05□□□□□ -0.16
PTPN6-219ENST00000542848 ISY1Q9ULR0 285 aaKnown RBP14.05□□□□□ -0.16
PTPN6-219ENST00000542848 STX8Q9UNK0 236 aa14.05□□□□□ -0.16
PTPN6-219ENST00000542848 SALL3Q9BXA9 1300 aa14.05□□□□□ -0.16
PTPN6-219ENST00000542848 A0A0U1RQG5 324 aaPredicted RBP14.04□□□□□ -0.16
PTPN6-219ENST00000542848 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.04□□□□□ -0.16
PTPN6-219ENST00000542848 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.04□□□□□ -0.16
PTPN6-219ENST00000542848 FOXP2O15409 715 aa14.04□□□□□ -0.16
PTPN6-219ENST00000542848 NOVP48745 357 aa14.04□□□□□ -0.16
PTPN6-219ENST00000542848 ALX1Q15699 326 aa14.04□□□□□ -0.16
PTPN6-219ENST00000542848 MFSD5Q6N075 450 aa14.04□□□□□ -0.16
PTPN6-219ENST00000542848 KCTD1Q719H9 257 aa14.04□□□□□ -0.16
PTPN6-219ENST00000542848 TICAM2Q86XR7 235 aa14.04□□□□□ -0.16
PTPN6-219ENST00000542848 EVI5LQ96CN4 794 aa14.04□□□□□ -0.16
PTPN6-219ENST00000542848 HELLSQ9NRZ9 838 aa14.04□□□□□ -0.16
PTPN6-219ENST00000542848 SOWAHBA6NEL2 793 aa14.03□□□□□ -0.16
PTPN6-219ENST00000542848 CTAGE5O15320 804 aa14.03□□□□□ -0.16
PTPN6-219ENST00000542848 ORC4O43929 436 aa14.03□□□□□ -0.16
PTPN6-219ENST00000542848 RANBP6O60518 1105 aaKnown RBP14.03□□□□□ -0.16
PTPN6-219ENST00000542848 FGRP09769 529 aa14.03□□□□□ -0.16
PTPN6-219ENST00000542848 ALAS1P13196 640 aa14.03□□□□□ -0.16
PTPN6-219ENST00000542848 IRX5P78411 483 aaPredicted RBP14.03□□□□□ -0.16
PTPN6-219ENST00000542848 TNFAIP2Q03169 654 aa14.03□□□□□ -0.16
PTPN6-219ENST00000542848 PPIGQ13427 754 aaKnown RBP eCLIP14.03□□□□□ -0.16
PTPN6-219ENST00000542848 ANKRD45Q5TZF3 282 aa14.03□□□□□ -0.16
PTPN6-219ENST00000542848 CCDC129Q6ZRS4 1044 aa14.03□□□□□ -0.16
PTPN6-219ENST00000542848 INCENPQ9NQS7 918 aa14.03□□□□□ -0.16
PTPN6-219ENST00000542848 PRR12Q9ULL5 1215 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms