RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 SAMD1Q6SPF0 538 aaPredicted RBP13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 TMEM179Q6ZVK1 233 aa13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 RUFY3Q7L099 469 aa13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 SPICE1Q8N0Z3 855 aa13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 SLC44A5Q8NCS7 719 aa13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 PPM1EQ8WY54 764 aa13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 TINF2Q9BSI4 451 aa13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 TSEN34Q9BSV6 310 aaKnown RBP13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 SH2D4AQ9H788 454 aa13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 ARHGEF10LQ9HCE6 1279 aa13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 STARD7Q9NQZ5 370 aa13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 MCM9Q9NXL9 1143 aa13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 DIS3Q9Y2L1 958 aaKnown RBP13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 CYP46A1Q9Y6A2 500 aa13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 ROBO3Q96MS0 1386 aa13.57□□□□□ -0.24
SRGAP1-205ENST00000542841 ZNF213O14771 459 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 TIMP1P01033 207 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 PGK2P07205 417 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 CASTP20810 708 aaKnown RBP13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 NT5C2P49902 561 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 ACLYP53396 1101 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 KCTD2Q14681 263 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 TMEM132BQ14DG7 1078 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 ANKRD1Q15327 319 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 KIAA1755Q5JYT7 1200 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 CCDC174Q6PII3 467 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 BLOC1S2Q6QNY1 142 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 IFNL3Q8IZI9 196 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 LCORLQ8N3X6 602 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 JAKMIP1Q96N16 626 aaKnown RBP13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 TTC14Q96N46 770 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 NEK1Q96PY6 1258 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 ASB2Q96Q27 587 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 CRNKL1Q9BZJ0 848 aaKnown RBP13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 NAPBQ9H115 298 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 ARMT1Q9H993 441 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 THEGQ9P2T0 379 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 CNPY2Q9Y2B0 182 aa13.56□□□□□ -0.24
SRGAP1-205ENST00000542841 MOXD2PA6NHM9 499 aa13.55□□□□□ -0.24
SRGAP1-205ENST00000542841 GSG1L2A8MUP6 293 aa13.55□□□□□ -0.24
SRGAP1-205ENST00000542841 ADAMTS4O75173 837 aa13.55□□□□□ -0.24
SRGAP1-205ENST00000542841 TAL1P17542 331 aaPredicted RBP13.55□□□□□ -0.24
SRGAP1-205ENST00000542841 AKNAD1Q5T1N1 836 aa13.55□□□□□ -0.24
SRGAP1-205ENST00000542841 MFSD5Q6N075 450 aa13.55□□□□□ -0.24
SRGAP1-205ENST00000542841 PBX4Q9BYU1 374 aa13.55□□□□□ -0.24
SRGAP1-205ENST00000542841 VCPKMTQ9H867 229 aa13.55□□□□□ -0.24
SRGAP1-205ENST00000542841 ATP8A2Q9NTI2 1148 aa13.55□□□□□ -0.24
SRGAP1-205ENST00000542841 SWAP70Q9UH65 585 aa13.55□□□□□ -0.24
SRGAP1-205ENST00000542841 TMX2Q9Y320 296 aa13.55□□□□□ -0.24
SRGAP1-205ENST00000542841 SLC4A4Q9Y6R1 1079 aa13.55□□□□□ -0.24
SRGAP1-205ENST00000542841 MROH7Q68CQ1 1323 aa13.55□□□□□ -0.24
SRGAP1-205ENST00000542841 WDR19Q8NEZ3 1342 aa13.55□□□□□ -0.24
SRGAP1-205ENST00000542841 NAV1Q8NEY1 1877 aa13.55□□□□□ -0.24
SRGAP1-205ENST00000542841 WDR46O15213 610 aaKnown RBP13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 APPP05067 770 aa13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 ZNF865P0CJ78 1059 aaPredicted RBP13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 PCP11498 1178 aaKnown RBP13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 RPS6KB1P23443 525 aa13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 MRPS5P82675 430 aaKnown RBP13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 EVX2Q03828 476 aa13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 ICA1Q05084 483 aa13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 PPIGQ13427 754 aaKnown RBP eCLIP13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 ZNF792Q3KQV3 632 aa13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 ADCK5Q3MIX3 580 aa13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 RIOX2Q8IUF8 465 aa13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 FBXL16Q8N461 479 aa13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 ADAMTS19Q8TE59 1207 aa13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 LENG1Q96BZ8 264 aaPredicted RBP13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 PRDM12Q9H4Q4 367 aa13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 RAPGEFL1Q9UHV5 662 aa13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 SMCHD1A6NHR9 2005 aa13.54□□□□□ -0.24
SRGAP1-205ENST00000542841 BAZ2AQ9UIF9 1905 aaKnown RBP13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 E7EWF7 191 aa13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 COPB2P35606 906 aa13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 PBX2P40425 430 aa13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 STAT3P40763 770 aa13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 TDO2P48775 406 aa13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 KCNA10Q16322 511 aa13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 TMEM240Q5SV17 173 aa13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 SIAH1Q8IUQ4 282 aa13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 TMEM199Q8N511 208 aa13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 MSL3Q8N5Y2 521 aaKnown RBP13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 ZSCAN31Q96LW9 406 aaPredicted RBP13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 GLT1D1Q96MS3 346 aa13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 UHRF1Q96T88 793 aaPredicted RBP13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 UPF3BQ9BZI7 483 aaKnown RBP13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 EPB41L4AQ9HCS5 686 aaPredicted RBP13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 PDRG1Q9NUG6 133 aa13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 ANAPC4Q9UJX5 808 aa13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 TBX21Q9UL17 535 aa13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 FAM184BQ9ULE4 1060 aa13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 ADAMTS5Q9UNA0 930 aa13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 SYNRGQ9UMZ2 1314 aa13.53□□□□□ -0.24
SRGAP1-205ENST00000542841 CD2BP2O95400 341 aaKnown RBP13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 IGFBP4P22692 258 aa13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 PLA2G5P39877 138 aa13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 TRDNQ13061 729 aa13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 RASIP1Q5U651 963 aa13.52□□□□□ -0.25
SRGAP1-205ENST00000542841 PSRC1Q6PGN9 363 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms