RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 SSPNQ14714 243 aa6.71□□□□□ -1.34
MDM2-228ENST00000542502 SLC14A2Q15849 920 aa6.71□□□□□ -1.34
MDM2-228ENST00000542502 CWF19L2Q2TBE0 894 aaKnown RBP6.71□□□□□ -1.34
MDM2-228ENST00000542502 NBPF9Q3BBW0 867 aa6.71□□□□□ -1.34
MDM2-228ENST00000542502 ARSHQ5FYA8 562 aa6.71□□□□□ -1.34
MDM2-228ENST00000542502 LINC00116Q8NCU8 138 aa6.71□□□□□ -1.34
MDM2-228ENST00000542502 RELTQ969Z4 430 aa6.71□□□□□ -1.34
MDM2-228ENST00000542502 KCNC2Q96PR1 638 aa6.71□□□□□ -1.34
MDM2-228ENST00000542502 MRS2Q9HD23 443 aa6.71□□□□□ -1.34
MDM2-228ENST00000542502 VTI1BQ9UEU0 232 aa6.71□□□□□ -1.34
MDM2-228ENST00000542502 MBD1Q9UIS9 605 aaPredicted RBP6.71□□□□□ -1.34
MDM2-228ENST00000542502 ABCA9Q8IUA7 1624 aa6.71□□□□□ -1.34
MDM2-228ENST00000542502 KIF13AQ9H1H9 1805 aa6.71□□□□□ -1.34
MDM2-228ENST00000542502 EHBP1L1Q8N3D4 1523 aa6.71□□□□□ -1.34
MDM2-228ENST00000542502 TIAM1Q13009 1591 aa6.7□□□□□ -1.34
MDM2-228ENST00000542502 RAG1P15918 1043 aa6.7□□□□□ -1.34
MDM2-228ENST00000542502 NBPF12Q5TAG4 269 aaPredicted RBP6.7□□□□□ -1.34
MDM2-228ENST00000542502 CEP128Q6ZU80 1094 aa6.7□□□□□ -1.34
MDM2-228ENST00000542502 TMC3Q7Z5M5 1100 aa6.7□□□□□ -1.34
MDM2-228ENST00000542502 MARCH10Q8NA82 808 aaPredicted RBP6.7□□□□□ -1.34
MDM2-228ENST00000542502 HHIPL1Q96JK4 782 aa6.7□□□□□ -1.34
MDM2-228ENST00000542502 SIGLEC10Q96LC7 697 aa6.7□□□□□ -1.34
MDM2-228ENST00000542502 GMIPQ9P107 970 aa6.7□□□□□ -1.34
MDM2-228ENST00000542502 IRAK3Q9Y616 596 aa6.7□□□□□ -1.34
MDM2-228ENST00000542502 CDK13Q14004 1512 aaKnown RBP6.7□□□□□ -1.34
MDM2-228ENST00000542502 MAGI3Q5TCQ9 1506 aa6.7□□□□□ -1.34
MDM2-228ENST00000542502 ARAP3Q8WWN8 1544 aa6.7□□□□□ -1.34
MDM2-228ENST00000542502 ROBO2Q9HCK4 1378 aa6.69□□□□□ -1.34
MDM2-228ENST00000542502 MAP3K4Q9Y6R4 1608 aa6.69□□□□□ -1.34
MDM2-228ENST00000542502 CD109Q6YHK3 1445 aa6.69□□□□□ -1.34
MDM2-228ENST00000542502 A0A0G2JLL6 359 aaPredicted RBP6.69□□□□□ -1.34
MDM2-228ENST00000542502 SSU72P8A0A1W2PR75 194 aa6.69□□□□□ -1.34
MDM2-228ENST00000542502 TLR3O15455 904 aaKnown RBP6.69□□□□□ -1.34
MDM2-228ENST00000542502 ATE1O95260 518 aa6.69□□□□□ -1.34
MDM2-228ENST00000542502 RAD51AP2Q09MP3 1159 aa6.69□□□□□ -1.34
MDM2-228ENST00000542502 LRRC3Q9BY71 257 aa6.69□□□□□ -1.34
MDM2-228ENST00000542502 KCNQ5Q9NR82 932 aa6.69□□□□□ -1.34
MDM2-228ENST00000542502 KBTBD4Q9NVX7 518 aa6.69□□□□□ -1.34
MDM2-228ENST00000542502 SIRT5Q9NXA8 310 aa6.69□□□□□ -1.34
MDM2-228ENST00000542502 SUPT6HQ7KZ85 1726 aaKnown RBP6.69□□□□□ -1.34
MDM2-228ENST00000542502 LRRIQ1Q96JM4 1722 aa6.69□□□□□ -1.34
MDM2-228ENST00000542502 NEO1Q92859 1461 aa6.68□□□□□ -1.34
MDM2-228ENST00000542502 MYO5CQ9NQX4 1742 aa6.68□□□□□ -1.34
MDM2-228ENST00000542502 TRIM13O60858 407 aa6.68□□□□□ -1.34
MDM2-228ENST00000542502 SYPP08247 313 aa6.68□□□□□ -1.34
MDM2-228ENST00000542502 PNLIPP16233 465 aa6.68□□□□□ -1.34
MDM2-228ENST00000542502 PI3P19957 117 aa6.68□□□□□ -1.34
MDM2-228ENST00000542502 ITGAEP38570 1179 aa6.68□□□□□ -1.34
MDM2-228ENST00000542502 SNW1Q13573 536 aaKnown RBP6.68□□□□□ -1.34
MDM2-228ENST00000542502 BBS9Q3SYG4 887 aa6.68□□□□□ -1.34
MDM2-228ENST00000542502 EFCAB2Q5VUJ9 269 aa6.68□□□□□ -1.34
MDM2-228ENST00000542502 FBXL19Q6PCT2 694 aa6.68□□□□□ -1.34
MDM2-228ENST00000542502 ERMP1Q7Z2K6 904 aa6.68□□□□□ -1.34
MDM2-228ENST00000542502 BRMS1Q9HCU9 246 aa6.68□□□□□ -1.34
MDM2-228ENST00000542502 PCDHB14Q9Y5E9 798 aa6.68□□□□□ -1.34
MDM2-228ENST00000542502 LRRC9Q6ZRR7 1453 aa6.67□□□□□ -1.34
MDM2-228ENST00000542502 N4BP3O15049 544 aa6.67□□□□□ -1.34
MDM2-228ENST00000542502 FOXD2O60548 495 aaPredicted RBP6.67□□□□□ -1.34
MDM2-228ENST00000542502 FKTNO75072 461 aa6.67□□□□□ -1.34
MDM2-228ENST00000542502 PRAMEF1O95521 474 aa6.67□□□□□ -1.34
MDM2-228ENST00000542502 VIPR1P32241 457 aa6.67□□□□□ -1.34
MDM2-228ENST00000542502 RTP1P59025 263 aa6.67□□□□□ -1.34
MDM2-228ENST00000542502 YBX1P67809 324 aaKnown RBP6.67□□□□□ -1.34
MDM2-228ENST00000542502 CDCP2Q5VXM1 449 aa6.67□□□□□ -1.34
MDM2-228ENST00000542502 PANK1Q8TE04 598 aa6.67□□□□□ -1.34
MDM2-228ENST00000542502 DACT3Q96B18 629 aaPredicted RBP6.67□□□□□ -1.34
MDM2-228ENST00000542502 PLCD4Q9BRC7 762 aa6.67□□□□□ -1.34
MDM2-228ENST00000542502 CNTD2Q9H8S5 307 aa6.67□□□□□ -1.34
MDM2-228ENST00000542502 SUPT16HQ9Y5B9 1047 aaKnown RBP6.67□□□□□ -1.34
MDM2-228ENST00000542502 ADAMTS20P59510 1910 aa6.67□□□□□ -1.34
MDM2-228ENST00000542502 ITSN2Q9NZM3 1697 aa6.67□□□□□ -1.34
MDM2-228ENST00000542502 PLCH2O75038 1416 aa6.67□□□□□ -1.34
MDM2-228ENST00000542502 PLEKHH2Q8IVE3 1493 aa6.66□□□□□ -1.34
MDM2-228ENST00000542502 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.66□□□□□ -1.34
MDM2-228ENST00000542502 ABLIM1O14639 778 aa6.66□□□□□ -1.34
MDM2-228ENST00000542502 SIGLEC6O43699 453 aa6.66□□□□□ -1.34
MDM2-228ENST00000542502 GREM1O60565 184 aa6.66□□□□□ -1.34
MDM2-228ENST00000542502 POLR2BP30876 1174 aaKnown RBP6.66□□□□□ -1.34
MDM2-228ENST00000542502 EPHB3P54753 998 aa6.66□□□□□ -1.34
MDM2-228ENST00000542502 ERVFRD-1P60508 538 aa6.66□□□□□ -1.34
MDM2-228ENST00000542502 TAGLNQ01995 201 aaKnown RBP6.66□□□□□ -1.34
MDM2-228ENST00000542502 OLFML2BQ68BL8 750 aa6.66□□□□□ -1.34
MDM2-228ENST00000542502 OVOS1Q6IE37 1185 aa6.66□□□□□ -1.34
MDM2-228ENST00000542502 ZPBP2Q6X784 338 aa6.66□□□□□ -1.34
MDM2-228ENST00000542502 FCRL2Q96LA5 508 aaPredicted RBP6.66□□□□□ -1.34
MDM2-228ENST00000542502 CNNM2Q9H8M5 875 aa6.66□□□□□ -1.34
MDM2-228ENST00000542502 COPRSQ9NQ92 184 aa6.66□□□□□ -1.34
MDM2-228ENST00000542502 TNFRSF10DQ9UBN6 386 aa6.66□□□□□ -1.34
MDM2-228ENST00000542502 CCNB3Q8WWL7 1395 aa6.66□□□□□ -1.34
MDM2-228ENST00000542502 TSPOAP1O95153 1857 aa6.65□□□□□ -1.34
MDM2-228ENST00000542502 CLEC3AO75596 197 aa6.65□□□□□ -1.34
MDM2-228ENST00000542502 SDHBP21912 280 aa6.65□□□□□ -1.34
MDM2-228ENST00000542502 EIF4A3P38919 411 aaKnown RBP6.65□□□□□ -1.34
MDM2-228ENST00000542502 CCNFP41002 786 aa6.65□□□□□ -1.34
MDM2-228ENST00000542502 AFF3P51826 1226 aaKnown RBP6.65□□□□□ -1.34
MDM2-228ENST00000542502 PRDM14Q9GZV8 571 aa6.65□□□□□ -1.34
MDM2-228ENST00000542502 GZF1Q9H116 711 aaPredicted RBP6.65□□□□□ -1.34
MDM2-228ENST00000542502 EHMT1Q9H9B1 1298 aa6.65□□□□□ -1.34
MDM2-228ENST00000542502 RTEL1Q9NZ71 1219 aa6.65□□□□□ -1.34
MDM2-228ENST00000542502 FADS2P1A8MWK0 482 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms