RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 CHURC1Q8WUH1 139 aa13.54□□□□□ -0.24
C2CD3-217ENST00000542452 MAML3Q96JK9 1138 aa13.54□□□□□ -0.24
C2CD3-217ENST00000542452 CNNM2Q9H8M5 875 aa13.54□□□□□ -0.24
C2CD3-217ENST00000542452 SLC27A2O14975 620 aa13.53□□□□□ -0.24
C2CD3-217ENST00000542452 CDC45O75419 566 aa13.53□□□□□ -0.24
C2CD3-217ENST00000542452 CENPBP07199 599 aaPredicted RBP13.53□□□□□ -0.24
C2CD3-217ENST00000542452 COPB2P35606 906 aa13.53□□□□□ -0.24
C2CD3-217ENST00000542452 SLC4A3P48751 1232 aa13.53□□□□□ -0.24
C2CD3-217ENST00000542452 CHST3Q7LGC8 479 aa13.53□□□□□ -0.24
C2CD3-217ENST00000542452 DPP9Q86TI2 863 aa13.53□□□□□ -0.24
C2CD3-217ENST00000542452 DIS3LQ8TF46 1054 aaKnown RBP13.53□□□□□ -0.24
C2CD3-217ENST00000542452 HMX1Q9NP08 348 aaPredicted RBP13.53□□□□□ -0.24
C2CD3-217ENST00000542452 ANO2Q9NQ90 1003 aa13.53□□□□□ -0.24
C2CD3-217ENST00000542452 HOMER2Q9NSB8 354 aa13.53□□□□□ -0.24
C2CD3-217ENST00000542452 DNAJC25-GNG10A0A024R161 153 aa13.52□□□□□ -0.25
C2CD3-217ENST00000542452 KCTD2Q14681 263 aa13.52□□□□□ -0.25
C2CD3-217ENST00000542452 NECTIN1Q15223 517 aa13.52□□□□□ -0.25
C2CD3-217ENST00000542452 MUM1L1Q5H9M0 696 aa13.52□□□□□ -0.25
C2CD3-217ENST00000542452 CREB3L3Q68CJ9 461 aa13.52□□□□□ -0.25
C2CD3-217ENST00000542452 LHX8Q68G74 356 aa13.52□□□□□ -0.25
C2CD3-217ENST00000542452 KAT14Q9H8E8 782 aa13.52□□□□□ -0.25
C2CD3-217ENST00000542452 RNF146Q9NTX7 359 aa13.52□□□□□ -0.25
C2CD3-217ENST00000542452 PPP4R2Q9NY27 417 aa13.52□□□□□ -0.25
C2CD3-217ENST00000542452 ASTN1O14525 1302 aa13.51□□□□□ -0.25
C2CD3-217ENST00000542452 FARP2O94887 1054 aaPredicted RBP13.51□□□□□ -0.25
C2CD3-217ENST00000542452 FDX1P10109 184 aa13.51□□□□□ -0.25
C2CD3-217ENST00000542452 SLC35G1Q2M3R5 365 aa13.51□□□□□ -0.25
C2CD3-217ENST00000542452 CCDC178Q5BJE1 867 aa13.51□□□□□ -0.25
C2CD3-217ENST00000542452 MFSD14CQ5VZR4 134 aa13.51□□□□□ -0.25
C2CD3-217ENST00000542452 CHST13Q8NET6 341 aa13.51□□□□□ -0.25
C2CD3-217ENST00000542452 NCOA7Q8NI08 942 aa13.51□□□□□ -0.25
C2CD3-217ENST00000542452 UBAC1Q9BSL1 405 aa13.51□□□□□ -0.25
C2CD3-217ENST00000542452 UBA5Q9GZZ9 404 aa13.51□□□□□ -0.25
C2CD3-217ENST00000542452 A1CFQ9NQ94 594 aaKnown RBP13.51□□□□□ -0.25
C2CD3-217ENST00000542452 GPHNQ9NQX3 736 aaPredicted RBP13.51□□□□□ -0.25
C2CD3-217ENST00000542452 OGDHLQ9ULD0 1010 aa13.51□□□□□ -0.25
C2CD3-217ENST00000542452 CTDP1Q9Y5B0 961 aaPredicted RBP13.51□□□□□ -0.25
C2CD3-217ENST00000542452 ICAM1P05362 532 aa13.5□□□□□ -0.25
C2CD3-217ENST00000542452 ALAS1P13196 640 aa13.5□□□□□ -0.25
C2CD3-217ENST00000542452 PRAMEF19Q5SWL8 479 aa13.5□□□□□ -0.25
C2CD3-217ENST00000542452 IFIT1BQ5T764 474 aaKnown RBP13.5□□□□□ -0.25
C2CD3-217ENST00000542452 KIAA1211Q6ZU35 1233 aa13.5□□□□□ -0.25
C2CD3-217ENST00000542452 RALYLQ86SE5 291 aaKnown RBP13.5□□□□□ -0.25
C2CD3-217ENST00000542452 STAG2Q8N3U4 1231 aa13.5□□□□□ -0.25
C2CD3-217ENST00000542452 ACAD9Q9H845 621 aa13.5□□□□□ -0.25
C2CD3-217ENST00000542452 CCPG1Q9ULG6 757 aa13.5□□□□□ -0.25
C2CD3-217ENST00000542452 DDX49Q9Y6V7 483 aaKnown RBP13.5□□□□□ -0.25
C2CD3-217ENST00000542452 TFRCP02786 760 aaKnown RBP13.49□□□□□ -0.25
C2CD3-217ENST00000542452 CNTN2Q02246 1040 aa13.49□□□□□ -0.25
C2CD3-217ENST00000542452 TRDNQ13061 729 aa13.49□□□□□ -0.25
C2CD3-217ENST00000542452 TKFCQ3LXA3 575 aa13.49□□□□□ -0.25
C2CD3-217ENST00000542452 GPATCH4Q5T3I0 446 aaKnown RBP13.49□□□□□ -0.25
C2CD3-217ENST00000542452 ERICH6BQ5W0A0 696 aa13.49□□□□□ -0.25
C2CD3-217ENST00000542452 TRERF1Q96PN7 1200 aa13.49□□□□□ -0.25
C2CD3-217ENST00000542452 PURBQ96QR8 312 aaKnown RBP13.49□□□□□ -0.25
C2CD3-217ENST00000542452 TINF2Q9BSI4 451 aa13.49□□□□□ -0.25
C2CD3-217ENST00000542452 FBXO40Q9UH90 709 aa13.49□□□□□ -0.25
C2CD3-217ENST00000542452 DDX20Q9UHI6 824 aaKnown RBP13.49□□□□□ -0.25
C2CD3-217ENST00000542452 MAD2L2Q9UI95 211 aa13.49□□□□□ -0.25
C2CD3-217ENST00000542452 DIS3Q9Y2L1 958 aaKnown RBP13.49□□□□□ -0.25
C2CD3-217ENST00000542452 BAZ2BQ9UIF8 2168 aaKnown RBP13.49□□□□□ -0.25
C2CD3-217ENST00000542452 PFASO15067 1338 aa13.48□□□□□ -0.25
C2CD3-217ENST00000542452 WDR19Q8NEZ3 1342 aa13.48□□□□□ -0.25
C2CD3-217ENST00000542452 SOWAHBA6NEL2 793 aa13.48□□□□□ -0.25
C2CD3-217ENST00000542452 NFIBO00712 420 aa13.48□□□□□ -0.25
C2CD3-217ENST00000542452 IFIT3O14879 490 aaKnown RBP13.48□□□□□ -0.25
C2CD3-217ENST00000542452 SNAI1O95863 264 aaPredicted RBP13.48□□□□□ -0.25
C2CD3-217ENST00000542452 ZNF865P0CJ78 1059 aaPredicted RBP13.48□□□□□ -0.25
C2CD3-217ENST00000542452 CDC37Q16543 378 aaPredicted RBP13.48□□□□□ -0.25
C2CD3-217ENST00000542452 ASPRV1Q53RT3 343 aa13.48□□□□□ -0.25
C2CD3-217ENST00000542452 ANO1Q5XXA6 986 aa13.48□□□□□ -0.25
C2CD3-217ENST00000542452 RASEFQ8IZ41 740 aa13.48□□□□□ -0.25
C2CD3-217ENST00000542452 ANKRD35Q8N283 1001 aa13.48□□□□□ -0.25
C2CD3-217ENST00000542452 FAM133AQ8N9E0 248 aa13.48□□□□□ -0.25
C2CD3-217ENST00000542452 IGDCC4Q8TDY8 1250 aa13.48□□□□□ -0.25
C2CD3-217ENST00000542452 CLEC4DQ8WXI8 215 aa13.48□□□□□ -0.25
C2CD3-217ENST00000542452 LENG1Q96BZ8 264 aaPredicted RBP13.48□□□□□ -0.25
C2CD3-217ENST00000542452 PAWRQ96IZ0 340 aaKnown RBP13.48□□□□□ -0.25
C2CD3-217ENST00000542452 LY9Q9HBG7 655 aa13.48□□□□□ -0.25
C2CD3-217ENST00000542452 SLC5A4Q9NY91 659 aa13.48□□□□□ -0.25
C2CD3-217ENST00000542452 SH2B2O14492 632 aaPredicted RBP13.47□□□□□ -0.25
C2CD3-217ENST00000542452 PRC1O43663 620 aa13.47□□□□□ -0.25
C2CD3-217ENST00000542452 PARP1P09874 1014 aaKnown RBP13.47□□□□□ -0.25
C2CD3-217ENST00000542452 TROAPQ12815 778 aa13.47□□□□□ -0.25
C2CD3-217ENST00000542452 GRM4Q14833 912 aa13.47□□□□□ -0.25
C2CD3-217ENST00000542452 WTAPQ15007 396 aa13.47□□□□□ -0.25
C2CD3-217ENST00000542452 TMEM67Q5HYA8 995 aa13.47□□□□□ -0.25
C2CD3-217ENST00000542452 MAMDC4Q6UXC1 1216 aa13.47□□□□□ -0.25
C2CD3-217ENST00000542452 SLC30A10Q6XR72 485 aa13.47□□□□□ -0.25
C2CD3-217ENST00000542452 ADGRF4Q8IZF3 695 aa13.47□□□□□ -0.25
C2CD3-217ENST00000542452 DDX11Q96FC9 970 aa13.47□□□□□ -0.25
C2CD3-217ENST00000542452 MYL10Q9BUA6 226 aa13.47□□□□□ -0.25
C2CD3-217ENST00000542452 LRRC2Q9BYS8 371 aa13.47□□□□□ -0.25
C2CD3-217ENST00000542452 KATNBL1Q9H079 304 aa13.47□□□□□ -0.25
C2CD3-217ENST00000542452 JMJD4Q9H9V9 463 aa13.47□□□□□ -0.25
C2CD3-217ENST00000542452 CYP39A1Q9NYL5 469 aa13.47□□□□□ -0.25
C2CD3-217ENST00000542452 SYNGAP1Q96PV0 1343 aa13.46□□□□□ -0.25
C2CD3-217ENST00000542452 PALM3A6NDB9 673 aaPredicted RBP13.46□□□□□ -0.25
C2CD3-217ENST00000542452 SEPT4O43236 478 aa13.46□□□□□ -0.25
C2CD3-217ENST00000542452 ADCY6O43306 1168 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms