RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 CPLX1O14810 134 aa8.99□□□□□ -0.97
PDLIM5-221ENST00000542407 NEBLO76041 1014 aa8.99□□□□□ -0.97
PDLIM5-221ENST00000542407 SFPQP23246 707 aaKnown RBP eCLIP8.99□□□□□ -0.97
PDLIM5-221ENST00000542407 MSL1Q68DK7 614 aa8.99□□□□□ -0.97
PDLIM5-221ENST00000542407 CC2D1AQ6P1N0 951 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-221ENST00000542407 TTC30AQ86WT1 665 aa8.99□□□□□ -0.97
PDLIM5-221ENST00000542407 AOPEPQ8N6M6 819 aa8.99□□□□□ -0.97
PDLIM5-221ENST00000542407 MICAL1Q8TDZ2 1067 aa8.99□□□□□ -0.97
PDLIM5-221ENST00000542407 PHKBQ93100 1093 aa8.99□□□□□ -0.97
PDLIM5-221ENST00000542407 C8orf76Q96K31 380 aa8.99□□□□□ -0.97
PDLIM5-221ENST00000542407 ZSCAN10Q96SZ4 725 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-221ENST00000542407 PLEKHA4Q9H4M7 779 aa8.99□□□□□ -0.97
PDLIM5-221ENST00000542407 ARFGAP3Q9NP61 516 aa8.99□□□□□ -0.97
PDLIM5-221ENST00000542407 RCOR1Q9UKL0 485 aa8.99□□□□□ -0.97
PDLIM5-221ENST00000542407 EIF3CLB5ME19 914 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 CDKL5O76039 1030 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 FMNL1O95466 1100 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 IFNAR1P17181 557 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 PDE6BP35913 854 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 MAGEA9P43362 315 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 GSTO1P78417 241 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 KIF23Q02241 960 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 ATL3Q6DD88 541 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 ILDR2Q71H61 639 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 NCAPG2Q86XI2 1143 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 ZNF654Q8IZM8 581 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 AGAP3Q96P47 875 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 USP28Q96RU2 1077 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 EIF3CQ99613 913 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 PARP3Q9Y6F1 533 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 GAKO14976 1311 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 PRDM1O75626 825 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 USP17L8P0C7I0 530 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 GSDMDP57764 484 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 EZH2Q15910 746 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 ARL10Q8N8L6 244 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 EXOC4Q96A65 974 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 FAM163AQ96GL9 167 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 SH3GL3Q99963 347 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 YIPF2Q9BWQ6 316 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 ZSWIM4Q9H7M6 989 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 ADAMTSL1Q8N6G6 1762 aa8.98□□□□□ -0.97
PDLIM5-221ENST00000542407 GPR75-ASB3A0A0A6YYF3 556 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 STK10O94804 968 aaKnown RBP8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 PYGBP11216 843 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 FUT2Q10981 343 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 STX1AQ16623 288 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 C12orf60Q5U649 245 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 SARM1Q6SZW1 724 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 MASTLQ96GX5 879 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 ALG1Q9BT22 464 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 CFAP45Q9UL16 551 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 H3BQF6 201 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 IVLP07476 585 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 ALDH1B1P30837 517 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 GUCY1A2P33402 732 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 ETF1P62495 437 aaKnown RBP8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 SLC15A2Q16348 729 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 ARMC3Q5W041 872 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 C17orf50Q8WW18 174 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 UBAC1Q9BSL1 405 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 COA1Q9GZY4 146 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 IQCGQ9H095 443 aaKnown RBP8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 PICK1Q9NRD5 415 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 RTEL1Q9NZ71 1219 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 SLX4Q8IY92 1834 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 TADA3O75528 432 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 IARSP41252 1262 aaKnown RBP8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 SF3B2Q13435 895 aaKnown RBP8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 RTN1Q16799 776 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 MFSD14BQ5SR56 506 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 KRT40Q6A162 431 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 KCNV1Q6PIU1 500 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 BRAPQ7Z569 592 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 IQCF2Q8IXL9 164 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 PARP9Q8IXQ6 854 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 ELOA2Q8IYF1 753 aaPredicted RBP8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 TTC30BQ8N4P2 665 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 CERS5Q8N5B7 392 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 FANCBQ8NB91 859 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 MIEF2Q96C03 454 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 SHISA4Q96DD7 197 aa8.97□□□□□ -0.97
PDLIM5-221ENST00000542407 ERICH2A1L162 156 aa8.96□□□□□ -0.97
PDLIM5-221ENST00000542407 C6orf229H3BNL8 230 aa8.96□□□□□ -0.97
PDLIM5-221ENST00000542407 SH3BP5O60239 455 aa8.96□□□□□ -0.97
PDLIM5-221ENST00000542407 NMT2O60551 498 aa8.96□□□□□ -0.97
PDLIM5-221ENST00000542407 PHACTR2O75167 634 aa8.96□□□□□ -0.97
PDLIM5-221ENST00000542407 TPM1P09493 284 aa8.96□□□□□ -0.97
PDLIM5-221ENST00000542407 PEX19P40855 299 aa8.96□□□□□ -0.97
PDLIM5-221ENST00000542407 BTDP43251 543 aa8.96□□□□□ -0.97
PDLIM5-221ENST00000542407 RPS6KA3P51812 740 aa8.96□□□□□ -0.97
PDLIM5-221ENST00000542407 EN1Q05925 392 aaPredicted RBP8.96□□□□□ -0.97
PDLIM5-221ENST00000542407 TROAPQ12815 778 aa8.96□□□□□ -0.97
PDLIM5-221ENST00000542407 CCDC178Q5BJE1 867 aa8.96□□□□□ -0.97
PDLIM5-221ENST00000542407 RCSD1Q6JBY9 416 aa8.96□□□□□ -0.97
PDLIM5-221ENST00000542407 ARMCX5Q6P1M9 558 aa8.96□□□□□ -0.97
PDLIM5-221ENST00000542407 RBM43Q6ZSC3 357 aaKnown RBP8.96□□□□□ -0.97
PDLIM5-221ENST00000542407 CRACR2BQ8N4Y2 399 aaPredicted RBP8.96□□□□□ -0.97
PDLIM5-221ENST00000542407 MCM9Q9NXL9 1143 aa8.96□□□□□ -0.97
PDLIM5-221ENST00000542407 EFCAB8A8MWE9 144 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms