RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 DUSP11O75319 330 aaKnown RBP13.44□□□□□ -0.26
VTN-203ENST00000542029 PGK1P00558 417 aa13.44□□□□□ -0.26
VTN-203ENST00000542029 TAL1P17542 331 aaPredicted RBP13.44□□□□□ -0.26
VTN-203ENST00000542029 SDSP20132 328 aa13.44□□□□□ -0.26
VTN-203ENST00000542029 MDM2Q00987 491 aaPredicted RBP13.44□□□□□ -0.26
VTN-203ENST00000542029 ACVR2BQ13705 512 aa13.44□□□□□ -0.26
VTN-203ENST00000542029 CCDC178Q5BJE1 867 aa13.44□□□□□ -0.26
VTN-203ENST00000542029 MFSD6Q6ZSS7 791 aa13.44□□□□□ -0.26
VTN-203ENST00000542029 KCTD1Q719H9 257 aa13.44□□□□□ -0.26
VTN-203ENST00000542029 PLEKHM2Q8IWE5 1019 aa13.44□□□□□ -0.26
VTN-203ENST00000542029 NUP133Q8WUM0 1156 aa13.44□□□□□ -0.26
VTN-203ENST00000542029 RNF146Q9NTX7 359 aa13.44□□□□□ -0.26
VTN-203ENST00000542029 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.44□□□□□ -0.26
VTN-203ENST00000542029 TACC3Q9Y6A5 838 aa13.44□□□□□ -0.26
VTN-203ENST00000542029 ASB14A6NK59 587 aa13.43□□□□□ -0.26
VTN-203ENST00000542029 SOX1O00570 391 aaPredicted RBP13.43□□□□□ -0.26
VTN-203ENST00000542029 NMT2O60551 498 aa13.43□□□□□ -0.26
VTN-203ENST00000542029 CCDC96Q2M329 555 aa13.43□□□□□ -0.26
VTN-203ENST00000542029 RRP12Q5JTH9 1297 aaKnown RBP13.43□□□□□ -0.26
VTN-203ENST00000542029 AKNAD1Q5T1N1 836 aa13.43□□□□□ -0.26
VTN-203ENST00000542029 BTNL9Q6UXG8 535 aa13.43□□□□□ -0.26
VTN-203ENST00000542029 ARMCX2Q7L311 632 aa13.43□□□□□ -0.26
VTN-203ENST00000542029 ZNF589Q86UQ0 364 aaPredicted RBP13.43□□□□□ -0.26
VTN-203ENST00000542029 FAM133AQ8N9E0 248 aa13.43□□□□□ -0.26
VTN-203ENST00000542029 PCSK9Q8NBP7 692 aaKnown RBP13.43□□□□□ -0.26
VTN-203ENST00000542029 ESR2Q92731 530 aa13.43□□□□□ -0.26
VTN-203ENST00000542029 FERMT2Q96AC1 680 aa13.43□□□□□ -0.26
VTN-203ENST00000542029 TRERF1Q96PN7 1200 aa13.43□□□□□ -0.26
VTN-203ENST00000542029 INCENPQ9NQS7 918 aa13.43□□□□□ -0.26
VTN-203ENST00000542029 HOMER2Q9NSB8 354 aa13.43□□□□□ -0.26
VTN-203ENST00000542029 DIAPH3Q9NSV4 1193 aa13.43□□□□□ -0.26
VTN-203ENST00000542029 PRR12Q9ULL5 1215 aa13.43□□□□□ -0.26
VTN-203ENST00000542029 GREB1LQ9C091 1923 aaPredicted RBP13.43□□□□□ -0.26
VTN-203ENST00000542029 ZNF536O15090 1300 aa13.42□□□□□ -0.26
VTN-203ENST00000542029 ADAMTS4O75173 837 aa13.42□□□□□ -0.26
VTN-203ENST00000542029 IGHDP01880 384 aa13.42□□□□□ -0.26
VTN-203ENST00000542029 ICAM1P05362 532 aa13.42□□□□□ -0.26
VTN-203ENST00000542029 ALAS1P13196 640 aa13.42□□□□□ -0.26
VTN-203ENST00000542029 CST5P28325 142 aaPredicted RBP13.42□□□□□ -0.26
VTN-203ENST00000542029 TRIM60Q495X7 471 aa13.42□□□□□ -0.26
VTN-203ENST00000542029 KLHDC9Q8NEP7 349 aa13.42□□□□□ -0.26
VTN-203ENST00000542029 EXOC6Q8TAG9 804 aa13.42□□□□□ -0.26
VTN-203ENST00000542029 LRCH3Q96II8 777 aa13.42□□□□□ -0.26
VTN-203ENST00000542029 AGBL1Q96MI9 1066 aa13.42□□□□□ -0.26
VTN-203ENST00000542029 TOX2Q96NM4 488 aa13.42□□□□□ -0.26
VTN-203ENST00000542029 A1CFQ9NQ94 594 aaKnown RBP13.42□□□□□ -0.26
VTN-203ENST00000542029 MYH8P13535 1937 aa13.41□□□□□ -0.26
VTN-203ENST00000542029 LOC102724159A0A0B4J2E5 919 aa13.41□□□□□ -0.26
VTN-203ENST00000542029 A0A1W2PQ45 241 aaPredicted RBP13.41□□□□□ -0.26
VTN-203ENST00000542029 A0A1W2PQY0 241 aa13.41□□□□□ -0.26
VTN-203ENST00000542029 ZNF213O14771 459 aa13.41□□□□□ -0.26
VTN-203ENST00000542029 TLE2Q04725 743 aa13.41□□□□□ -0.26
VTN-203ENST00000542029 PWP2Q15269 919 aaKnown RBP13.41□□□□□ -0.26
VTN-203ENST00000542029 SYDE2Q5VT97 1194 aa13.41□□□□□ -0.26
VTN-203ENST00000542029 CCDC174Q6PII3 467 aa13.41□□□□□ -0.26
VTN-203ENST00000542029 IQCA1Q86XH1 822 aa13.41□□□□□ -0.26
VTN-203ENST00000542029 CCDC144CPQ8IYA2 1237 aa13.41□□□□□ -0.26
VTN-203ENST00000542029 FGD4Q96M96 766 aa13.41□□□□□ -0.26
VTN-203ENST00000542029 GLT1D1Q96MS3 346 aa13.41□□□□□ -0.26
VTN-203ENST00000542029 TMEM47Q9BQJ4 181 aa13.41□□□□□ -0.26
VTN-203ENST00000542029 RANBP17Q9H2T7 1088 aaKnown RBP13.41□□□□□ -0.26
VTN-203ENST00000542029 PRDM5Q9NQX1 630 aaPredicted RBP13.41□□□□□ -0.26
VTN-203ENST00000542029 STARD7Q9NQZ5 370 aa13.41□□□□□ -0.26
VTN-203ENST00000542029 CTNNA3Q9UI47 895 aa13.41□□□□□ -0.26
VTN-203ENST00000542029 CCPG1Q9ULG6 757 aa13.41□□□□□ -0.26
VTN-203ENST00000542029 MTMR7Q9Y216 660 aa13.41□□□□□ -0.26
VTN-203ENST00000542029 LAMA3Q16787 3333 aa13.41□□□□□ -0.26
VTN-203ENST00000542029 ELP1O95163 1332 aa13.4□□□□□ -0.26
VTN-203ENST00000542029 SYNRGQ9UMZ2 1314 aa13.4□□□□□ -0.26
VTN-203ENST00000542029 DCDC2CA8MYV0 355 aa13.4□□□□□ -0.26
VTN-203ENST00000542029 CLTBP09497 229 aa13.4□□□□□ -0.26
VTN-203ENST00000542029 ACLYP53396 1101 aa13.4□□□□□ -0.26
VTN-203ENST00000542029 GJA9P57773 515 aa13.4□□□□□ -0.26
VTN-203ENST00000542029 HAND2P61296 217 aa13.4□□□□□ -0.26
VTN-203ENST00000542029 CCDC144BQ3MJ40 725 aa13.4□□□□□ -0.26
VTN-203ENST00000542029 CWC27Q6UX04 472 aaKnown RBP13.4□□□□□ -0.26
VTN-203ENST00000542029 DGKHQ86XP1 1220 aa13.4□□□□□ -0.26
VTN-203ENST00000542029 DSCC1Q9BVC3 393 aa13.4□□□□□ -0.26
VTN-203ENST00000542029 UPF3AQ9H1J1 476 aaKnown RBP13.4□□□□□ -0.26
VTN-203ENST00000542029 PDLIM7Q9NR12 457 aa13.4□□□□□ -0.26
VTN-203ENST00000542029 ADD3Q9UEY8 706 aaKnown RBP13.4□□□□□ -0.26
VTN-203ENST00000542029 MROH7Q68CQ1 1323 aa13.39□□□□□ -0.27
VTN-203ENST00000542029 C6orf222P0C671 652 aaPredicted RBP13.39□□□□□ -0.27
VTN-203ENST00000542029 PDHBP11177 359 aa13.39□□□□□ -0.27
VTN-203ENST00000542029 NKX3-2P78367 333 aa13.39□□□□□ -0.27
VTN-203ENST00000542029 CNTN2Q02246 1040 aa13.39□□□□□ -0.27
VTN-203ENST00000542029 KCNA10Q16322 511 aa13.39□□□□□ -0.27
VTN-203ENST00000542029 GPATCH4Q5T3I0 446 aaKnown RBP13.39□□□□□ -0.27
VTN-203ENST00000542029 CCSAPQ6IQ19 270 aaPredicted RBP13.39□□□□□ -0.27
VTN-203ENST00000542029 NSMFQ6X4W1 530 aa13.39□□□□□ -0.27
VTN-203ENST00000542029 ANKRD33Q7Z3H0 272 aa13.39□□□□□ -0.27
VTN-203ENST00000542029 CYP39A1Q9NYL5 469 aa13.39□□□□□ -0.27
VTN-203ENST00000542029 SOWAHBA6NEL2 793 aa13.38□□□□□ -0.27
VTN-203ENST00000542029 KIAA0355O15063 1070 aa13.38□□□□□ -0.27
VTN-203ENST00000542029 ZEB2O60315 1214 aa13.38□□□□□ -0.27
VTN-203ENST00000542029 PQBP1O60828 265 aaKnown RBP13.38□□□□□ -0.27
VTN-203ENST00000542029 CABYRO75952 493 aa13.38□□□□□ -0.27
VTN-203ENST00000542029 SNHG28P0DPA3 235 aa13.38□□□□□ -0.27
VTN-203ENST00000542029 TNFAIP2Q03169 654 aa13.38□□□□□ -0.27
VTN-203ENST00000542029 ZNF543Q08ER8 600 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms