RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 MSL3Q8N5Y2 521 aaKnown RBP25.96■■□□□ 1.75
C2CD3-216ENST00000541922 ACAD9Q9H845 621 aa25.96■■□□□ 1.75
C2CD3-216ENST00000541922 GPCPD1Q9NPB8 672 aa25.96■■□□□ 1.75
C2CD3-216ENST00000541922 RNF146Q9NTX7 359 aa25.96■■□□□ 1.75
C2CD3-216ENST00000541922 FRMPD2Q68DX3 1309 aaPredicted RBP25.95■■□□□ 1.75
C2CD3-216ENST00000541922 PDHBP11177 359 aa25.95■■□□□ 1.74
C2CD3-216ENST00000541922 ALAS1P13196 640 aa25.95■■□□□ 1.74
C2CD3-216ENST00000541922 SLC16A2P36021 539 aa25.95■■□□□ 1.74
C2CD3-216ENST00000541922 BTNL9Q6UXG8 535 aa25.95■■□□□ 1.74
C2CD3-216ENST00000541922 DGKHQ86XP1 1220 aa25.95■■□□□ 1.74
C2CD3-216ENST00000541922 ARRDC4Q8NCT1 418 aa25.95■■□□□ 1.74
C2CD3-216ENST00000541922 KRT23Q9C075 422 aa25.95■■□□□ 1.74
C2CD3-216ENST00000541922 COLQQ9Y215 455 aaPredicted RBP25.95■■□□□ 1.74
C2CD3-216ENST00000541922 CNPY2Q9Y2B0 182 aa25.95■■□□□ 1.74
C2CD3-216ENST00000541922 DNM1LO00429 736 aa25.94■■□□□ 1.74
C2CD3-216ENST00000541922 HABP4Q5JVS0 413 aaKnown RBP25.94■■□□□ 1.74
C2CD3-216ENST00000541922 SYDE2Q5VT97 1194 aa25.94■■□□□ 1.74
C2CD3-216ENST00000541922 ZNF467Q7Z7K2 595 aaPredicted RBP25.94■■□□□ 1.74
C2CD3-216ENST00000541922 C7orf61Q8IZ16 206 aa25.94■■□□□ 1.74
C2CD3-216ENST00000541922 TRERF1Q96PN7 1200 aa25.94■■□□□ 1.74
C2CD3-216ENST00000541922 CNNM2Q9H8M5 875 aa25.94■■□□□ 1.74
C2CD3-216ENST00000541922 SYNGAP1Q96PV0 1343 aa25.93■■□□□ 1.74
C2CD3-216ENST00000541922 MAMDC4Q6UXC1 1216 aa25.93■■□□□ 1.74
C2CD3-216ENST00000541922 RANBP17Q9H2T7 1088 aaKnown RBP25.93■■□□□ 1.74
C2CD3-216ENST00000541922 ZSWIM5Q9P217 1185 aa25.93■■□□□ 1.74
C2CD3-216ENST00000541922 CCPG1Q9ULG6 757 aa25.93■■□□□ 1.74
C2CD3-216ENST00000541922 TAL1P17542 331 aaPredicted RBP25.92■■□□□ 1.74
C2CD3-216ENST00000541922 ZNF543Q08ER8 600 aa25.92■■□□□ 1.74
C2CD3-216ENST00000541922 GJC2Q5T442 439 aaPredicted RBP25.92■■□□□ 1.74
C2CD3-216ENST00000541922 CHRDL2Q6WN34 429 aa25.92■■□□□ 1.74
C2CD3-216ENST00000541922 ZSCAN10Q96SZ4 725 aaPredicted RBP25.92■■□□□ 1.74
C2CD3-216ENST00000541922 SENP6Q9GZR1 1112 aaPredicted RBP25.92■■□□□ 1.74
C2CD3-216ENST00000541922 MCM3APO60318 1980 aa25.91■■□□□ 1.74
C2CD3-216ENST00000541922 KBTBD13C9JR72 458 aa25.91■■□□□ 1.74
C2CD3-216ENST00000541922 POTEB2H3BUK9 544 aa25.91■■□□□ 1.74
C2CD3-216ENST00000541922 MYCNP04198 464 aaPredicted RBP25.91■■□□□ 1.74
C2CD3-216ENST00000541922 ICAM1P05362 532 aa25.91■■□□□ 1.74
C2CD3-216ENST00000541922 ZNF865P0CJ78 1059 aaPredicted RBP25.91■■□□□ 1.74
C2CD3-216ENST00000541922 SNHG28P0DPA3 235 aa25.91■■□□□ 1.74
C2CD3-216ENST00000541922 RARBP10826 455 aa25.91■■□□□ 1.74
C2CD3-216ENST00000541922 A1CFQ9NQ94 594 aaKnown RBP25.91■■□□□ 1.74
C2CD3-216ENST00000541922 SGSM2O43147 1006 aa25.9■■□□□ 1.74
C2CD3-216ENST00000541922 SNAI1O95863 264 aaPredicted RBP25.9■■□□□ 1.74
C2CD3-216ENST00000541922 AKR1A1P14550 325 aa25.9■■□□□ 1.74
C2CD3-216ENST00000541922 PTH1RQ03431 593 aa25.9■■□□□ 1.74
C2CD3-216ENST00000541922 CENPQQ7L2Z9 268 aaPredicted RBP25.9■■□□□ 1.74
C2CD3-216ENST00000541922 PNMA1Q8ND90 353 aa25.9■■□□□ 1.74
C2CD3-216ENST00000541922 ANKS1AQ92625 1134 aa25.9■■□□□ 1.74
C2CD3-216ENST00000541922 UBAC1Q9BSL1 405 aa25.9■■□□□ 1.74
C2CD3-216ENST00000541922 KAT14Q9H8E8 782 aa25.9■■□□□ 1.74
C2CD3-216ENST00000541922 LRRC26Q2I0M4 334 aa25.89■■□□□ 1.74
C2CD3-216ENST00000541922 GPATCH4Q5T3I0 446 aaKnown RBP25.89■■□□□ 1.74
C2CD3-216ENST00000541922 ENAHQ8N8S7 591 aaPredicted RBP25.89■■□□□ 1.74
C2CD3-216ENST00000541922 FAM133AQ8N9E0 248 aa25.89■■□□□ 1.74
C2CD3-216ENST00000541922 FGD4Q96M96 766 aa25.89■■□□□ 1.74
C2CD3-216ENST00000541922 XPNPEP3Q9NQH7 507 aa25.89■■□□□ 1.74
C2CD3-216ENST00000541922 ZHX1Q9UKY1 873 aaPredicted RBP25.89■■□□□ 1.74
C2CD3-216ENST00000541922 U3KPZ7 1027 aaPredicted RBP25.89■■□□□ 1.74
C2CD3-216ENST00000541922 TNKSO95271 1327 aa25.88■■□□□ 1.73
C2CD3-216ENST00000541922 CNTN2Q02246 1040 aa25.88■■□□□ 1.73
C2CD3-216ENST00000541922 TRDNQ13061 729 aa25.88■■□□□ 1.73
C2CD3-216ENST00000541922 LRRC41Q15345 812 aa25.88■■□□□ 1.73
C2CD3-216ENST00000541922 MUM1L1Q5H9M0 696 aa25.88■■□□□ 1.73
C2CD3-216ENST00000541922 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.88■■□□□ 1.73
C2CD3-216ENST00000541922 ZMYND8Q9ULU4 1186 aaPredicted RBP25.88■■□□□ 1.73
C2CD3-216ENST00000541922 SLC34A2O95436 690 aa25.87■■□□□ 1.73
C2CD3-216ENST00000541922 ARMCX2Q7L311 632 aa25.87■■□□□ 1.73
C2CD3-216ENST00000541922 ABHD16BQ9H3Z7 469 aa25.87■■□□□ 1.73
C2CD3-216ENST00000541922 PNMA2Q9UL42 364 aa25.87■■□□□ 1.73
C2CD3-216ENST00000541922 FAM184BQ9ULE4 1060 aa25.87■■□□□ 1.73
C2CD3-216ENST00000541922 CYP21A2P08686 494 aa25.86■■□□□ 1.73
C2CD3-216ENST00000541922 GOLGA8HP0CJ92 632 aa25.86■■□□□ 1.73
C2CD3-216ENST00000541922 ATN1P54259 1190 aaPredicted RBP25.86■■□□□ 1.73
C2CD3-216ENST00000541922 ACVR2BQ13705 512 aa25.86■■□□□ 1.73
C2CD3-216ENST00000541922 NSMFQ6X4W1 530 aa25.86■■□□□ 1.73
C2CD3-216ENST00000541922 CCDC144CPQ8IYA2 1237 aa25.86■■□□□ 1.73
C2CD3-216ENST00000541922 RBM27Q9P2N5 1060 aaKnown RBP25.86■■□□□ 1.73
C2CD3-216ENST00000541922 PGK1P00558 417 aa25.85■■□□□ 1.73
C2CD3-216ENST00000541922 RNF180Q86T96 592 aa25.85■■□□□ 1.73
C2CD3-216ENST00000541922 CYP39A1Q9NYL5 469 aa25.85■■□□□ 1.73
C2CD3-216ENST00000541922 SOWAHBA6NEL2 793 aa25.84■■□□□ 1.73
C2CD3-216ENST00000541922 ASB14A6NK59 587 aa25.84■■□□□ 1.73
C2CD3-216ENST00000541922 SYN1P17600 705 aa25.84■■□□□ 1.73
C2CD3-216ENST00000541922 IFIT1BQ5T764 474 aaKnown RBP25.84■■□□□ 1.73
C2CD3-216ENST00000541922 LENG1Q96BZ8 264 aaPredicted RBP25.84■■□□□ 1.73
C2CD3-216ENST00000541922 ADCYAP1R1P41586 468 aa25.83■■□□□ 1.73
C2CD3-216ENST00000541922 ASPRV1Q53RT3 343 aa25.83■■□□□ 1.73
C2CD3-216ENST00000541922 KIAA1211Q6ZU35 1233 aa25.83■■□□□ 1.73
C2CD3-216ENST00000541922 CYB5R4Q7L1T6 521 aa25.83■■□□□ 1.73
C2CD3-216ENST00000541922 MAP4K1Q92918 833 aa25.83■■□□□ 1.73
C2CD3-216ENST00000541922 UBA5Q9GZZ9 404 aa25.83■■□□□ 1.73
C2CD3-216ENST00000541922 PARP1P09874 1014 aaKnown RBP25.82■■□□□ 1.72
C2CD3-216ENST00000541922 RALYLQ86SE5 291 aaKnown RBP25.82■■□□□ 1.72
C2CD3-216ENST00000541922 FERMT2Q96AC1 680 aa25.82■■□□□ 1.72
C2CD3-216ENST00000541922 PRO3102Q9H379 93 aa25.82■■□□□ 1.72
C2CD3-216ENST00000541922 CPVLQ9H3G5 476 aa25.82■■□□□ 1.72
C2CD3-216ENST00000541922 WDR19Q8NEZ3 1342 aa25.82■■□□□ 1.72
C2CD3-216ENST00000541922 NFIBO00712 420 aa25.81■■□□□ 1.72
C2CD3-216ENST00000541922 DUSP11O75319 330 aaKnown RBP25.81■■□□□ 1.72
C2CD3-216ENST00000541922 RTP1P59025 263 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms