RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 PRDX5P30044 214 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 SYKP43405 635 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 TRDNQ13061 729 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 PPIL2Q13356 520 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 SNAPC2Q13487 334 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 SLC39A14Q15043 492 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 MAP9Q49MG5 647 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 ANO1Q5XXA6 986 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 CDC42EP5Q6NZY7 148 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 VSTM4Q8IW00 320 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 SPATA5Q8NB90 893 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 FBXO18Q8NFZ0 1043 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 CTCFLQ8NI51 663 aaPredicted RBP11.78□□□□□ -0.52
CHFR-219ENST00000541341 IPO4Q8TEX9 1081 aaKnown RBP11.78□□□□□ -0.52
CHFR-219ENST00000541341 SMARCE1Q969G3 411 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 ZNF341Q9BYN7 854 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 UBXN6Q9BZV1 441 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.78□□□□□ -0.52
CHFR-219ENST00000541341 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.78□□□□□ -0.52
CHFR-219ENST00000541341 CEP131Q9UPN4 1083 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 COLQQ9Y215 455 aaPredicted RBP11.78□□□□□ -0.52
CHFR-219ENST00000541341 DAGLAQ9Y4D2 1042 aa11.78□□□□□ -0.52
CHFR-219ENST00000541341 PDHXO00330 501 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 RPS6KA5O75582 802 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 WDHD1O75717 1129 aaPredicted RBP11.77□□□□□ -0.53
CHFR-219ENST00000541341 FMNL1O95466 1100 aaPredicted RBP11.77□□□□□ -0.53
CHFR-219ENST00000541341 CCDC175P0C221 793 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 PDIA3P30101 505 aaKnown RBP11.77□□□□□ -0.53
CHFR-219ENST00000541341 TXLNAP40222 546 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 PSMC4P43686 418 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 HDLBPQ00341 1268 aaKnown RBP11.77□□□□□ -0.53
CHFR-219ENST00000541341 SEMA3FQ13275 785 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 SMC1AQ14683 1233 aaKnown RBP11.77□□□□□ -0.53
CHFR-219ENST00000541341 FILIP1LQ4L180 1135 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 ZMYM1Q5SVZ6 1142 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 MYSM1Q5VVJ2 828 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 DCAF15Q66K64 600 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 FAM173BQ6P4H8 233 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 TMED8Q6PL24 325 aaPredicted RBP11.77□□□□□ -0.53
CHFR-219ENST00000541341 FAM83AQ86UY5 434 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 WDR66Q8TBY9 1149 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 RPGRIP1Q96KN7 1286 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 PANX2Q96RD6 677 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 BAG1Q99933 345 aaPredicted RBP11.77□□□□□ -0.53
CHFR-219ENST00000541341 MED4Q9NPJ6 270 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 USP40Q9NVE5 1235 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 TMEM51Q9NW97 253 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 MAST3O60307 1309 aa11.77□□□□□ -0.53
CHFR-219ENST00000541341 H0YGN5 161 aa11.76□□□□□ -0.53
CHFR-219ENST00000541341 KIF5CO60282 957 aa11.76□□□□□ -0.53
CHFR-219ENST00000541341 JAK2O60674 1132 aa11.76□□□□□ -0.53
CHFR-219ENST00000541341 BMP15O95972 392 aa11.76□□□□□ -0.53
CHFR-219ENST00000541341 CYP2C8P10632 490 aa11.76□□□□□ -0.53
CHFR-219ENST00000541341 ERCC5P28715 1186 aaPredicted RBP11.76□□□□□ -0.53
CHFR-219ENST00000541341 IRX5P78411 483 aaPredicted RBP11.76□□□□□ -0.53
CHFR-219ENST00000541341 GNL2Q13823 731 aaKnown RBP11.76□□□□□ -0.53
CHFR-219ENST00000541341 TRIM14Q14142 442 aa11.76□□□□□ -0.53
CHFR-219ENST00000541341 ARHGEF6Q15052 776 aa11.76□□□□□ -0.53
CHFR-219ENST00000541341 ARMCX5Q6P1M9 558 aa11.76□□□□□ -0.53
CHFR-219ENST00000541341 HHIPL2Q6UWX4 724 aa11.76□□□□□ -0.53
CHFR-219ENST00000541341 PI16Q6UXB8 463 aa11.76□□□□□ -0.53
CHFR-219ENST00000541341 RALYLQ86SE5 291 aaKnown RBP11.76□□□□□ -0.53
CHFR-219ENST00000541341 CCDC84Q86UT8 332 aaPredicted RBP11.76□□□□□ -0.53
CHFR-219ENST00000541341 NCOA7Q8NI08 942 aa11.76□□□□□ -0.53
CHFR-219ENST00000541341 FAM151AQ8WW52 585 aa11.76□□□□□ -0.53
CHFR-219ENST00000541341 TRIM47Q96LD4 638 aa11.76□□□□□ -0.53
CHFR-219ENST00000541341 MTA3Q9BTC8 594 aa11.76□□□□□ -0.53
CHFR-219ENST00000541341 BRMS1Q9HCU9 246 aa11.76□□□□□ -0.53
CHFR-219ENST00000541341 BIN2Q9UBW5 565 aaPredicted RBP11.76□□□□□ -0.53
CHFR-219ENST00000541341 FAM198AQ9UFP1 575 aa11.76□□□□□ -0.53
CHFR-219ENST00000541341 SUGT1Q9Y2Z0 365 aa11.76□□□□□ -0.53
CHFR-219ENST00000541341 USP27XA6NNY8 438 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 RNF113AO15541 343 aaKnown RBP11.75□□□□□ -0.53
CHFR-219ENST00000541341 LDHBP07195 334 aaKnown RBP11.75□□□□□ -0.53
CHFR-219ENST00000541341 OSBPP22059 807 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 ZAP70P43403 619 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 USP5P45974 858 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 FXR1P51114 621 aaKnown RBP eCLIP11.75□□□□□ -0.53
CHFR-219ENST00000541341 PPP2R3AQ06190 1150 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 PPATQ06203 517 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 PPP2R5BQ15173 497 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 TTF1Q15361 905 aaPredicted RBP11.75□□□□□ -0.53
CHFR-219ENST00000541341 SAFBQ15424 915 aaKnown RBP eCLIP11.75□□□□□ -0.53
CHFR-219ENST00000541341 SPECC1LQ69YQ0 1117 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 CC2D1AQ6P1N0 951 aaPredicted RBP11.75□□□□□ -0.53
CHFR-219ENST00000541341 C17orf99Q6UX52 265 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 GADL1Q6ZQY3 521 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 ZSCAN29Q8IWY8 852 aaPredicted RBP11.75□□□□□ -0.53
CHFR-219ENST00000541341 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
CHFR-219ENST00000541341 ANKRD20A12PQ8NF67 263 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 ENOX1Q8TC92 643 aaKnown RBP11.75□□□□□ -0.53
CHFR-219ENST00000541341 RAET1EQ8TD07 263 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 RUBCNQ92622 972 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 DPF3Q92784 378 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.75□□□□□ -0.53
CHFR-219ENST00000541341 GOLPH3LQ9H4A5 285 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 YY1AP1Q9H869 796 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 VIPAS39Q9H9C1 493 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 PAG1Q9NWQ8 432 aa11.75□□□□□ -0.53
CHFR-219ENST00000541341 PPP2R2CQ9Y2T4 447 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms