RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 SLC51AQ86UW1 340 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 ALYREFQ86V81 257 aaKnown RBP6.81□□□□□ -1.32
CDKN3-206ENST00000541304 SKAP1Q86WV1 359 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 TRIM50Q86XT4 487 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 KIAA0825Q8IV33 1275 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 DEPDC4Q8N2C3 294 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 CERS5Q8N5B7 392 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.81□□□□□ -1.32
CDKN3-206ENST00000541304 MAP4K1Q92918 833 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 OSBP2Q969R2 916 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 IL17RAQ96F46 866 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 FAM227BQ96M60 508 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 STRBPQ96SI9 672 aaKnown RBP6.81□□□□□ -1.32
CDKN3-206ENST00000541304 IDI2Q9BXS1 227 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 PUS7LQ9H0K6 701 aaKnown RBP6.81□□□□□ -1.32
CDKN3-206ENST00000541304 RNF41Q9H4P4 317 aaPredicted RBP6.81□□□□□ -1.32
CDKN3-206ENST00000541304 SCHIP1Q9P0W5 487 aaPredicted RBP6.81□□□□□ -1.32
CDKN3-206ENST00000541304 DAGLAQ9Y4D2 1042 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 PPP2R3BQ9Y5P8 575 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 ZNF541Q9H0D2 1346 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 POM121CA8CG34 1229 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 PIK3R2O00459 728 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 MSTNO14793 375 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 KHNYNO15037 678 aaKnown RBP6.8□□□□□ -1.32
CDKN3-206ENST00000541304 ENTPD3O75355 529 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 HSPD1P10809 573 aaKnown RBP6.8□□□□□ -1.32
CDKN3-206ENST00000541304 CD33P20138 364 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 ADH6P28332 368 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 TNP2Q05952 138 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 CFAP100Q494V2 611 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 SBK1Q52WX2 424 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 SAMD5Q5TGI4 173 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 USP17L2Q6R6M4 530 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 USP50Q70EL3 339 aaPredicted RBP6.8□□□□□ -1.32
CDKN3-206ENST00000541304 TTC6Q86TZ1 520 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 FAM83AQ86UY5 434 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 PNMA8AQ86V59 439 aaPredicted RBP6.8□□□□□ -1.32
CDKN3-206ENST00000541304 APOBEC3FQ8IUX4 373 aaKnown RBP6.8□□□□□ -1.32
CDKN3-206ENST00000541304 TEX11Q8IYF3 940 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 ZIC5Q96T25 663 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 MTA3Q9BTC8 594 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 LSG1Q9H089 658 aaKnown RBP6.8□□□□□ -1.32
CDKN3-206ENST00000541304 NAPBQ9H115 298 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 CNNM2Q9H8M5 875 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 MYOZ2Q9NPC6 264 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 AVENQ9NQS1 362 aaPredicted RBP6.8□□□□□ -1.32
CDKN3-206ENST00000541304 ADARB2Q9NS39 739 aaKnown RBP6.8□□□□□ -1.32
CDKN3-206ENST00000541304 AATFQ9NY61 560 aaKnown RBP eCLIP6.8□□□□□ -1.32
CDKN3-206ENST00000541304 GPRC5DQ9NZD1 345 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 ATRNL1Q5VV63 1379 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 ROBO3Q96MS0 1386 aa6.8□□□□□ -1.32
CDKN3-206ENST00000541304 WDR90Q96KV7 1748 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 SCN9AQ15858 1988 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 M0R2C6 588 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 APPP05067 770 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 HLA-DOAP06340 250 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 PSMA5P28066 241 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 HSPA4P34932 840 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 USP5P45974 858 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 TDO2P48775 406 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 GMPSP49915 693 aaPredicted RBP6.79□□□□□ -1.32
CDKN3-206ENST00000541304 ATP1A2P50993 1020 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 RBM5P52756 815 aaKnown RBP eCLIP6.79□□□□□ -1.32
CDKN3-206ENST00000541304 EPHA4P54764 986 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 RHBDL3P58872 404 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 TRDNQ13061 729 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 KIF4BQ2VIQ3 1234 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 APOBEC3HQ6NTF7 200 aaKnown RBP6.79□□□□□ -1.32
CDKN3-206ENST00000541304 ZNF589Q86UQ0 364 aaPredicted RBP6.79□□□□□ -1.32
CDKN3-206ENST00000541304 SLC9A9Q8IVB4 645 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 LCORLQ8N3X6 602 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 ADAMTS19Q8TE59 1207 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 ZNF384Q8TF68 577 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 KCNB2Q92953 911 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 ZBED3Q96IU2 234 aaPredicted RBP6.79□□□□□ -1.32
CDKN3-206ENST00000541304 TBC1D32Q96NH3 1257 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 SPOCK3Q9BQ16 436 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 USP26Q9BXU7 913 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 C22orf23Q9BZE7 217 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 TM6SF1Q9BZW5 370 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 EHD4Q9H223 541 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 CNOT7Q9UIV1 285 aaKnown RBP6.79□□□□□ -1.32
CDKN3-206ENST00000541304 HACL1Q9UJ83 578 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 ANAPC4Q9UJX5 808 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 SLC4A4Q9Y6R1 1079 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 CHD4Q14839 1912 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 SBF1O95248 1867 aa6.79□□□□□ -1.32
CDKN3-206ENST00000541304 FLT1P17948 1338 aa6.78□□□□□ -1.32
CDKN3-206ENST00000541304 WDR19Q8NEZ3 1342 aa6.78□□□□□ -1.32
CDKN3-206ENST00000541304 SCN4AP35499 1836 aa6.78□□□□□ -1.32
CDKN3-206ENST00000541304 GSG1L2A8MUP6 293 aa6.78□□□□□ -1.32
CDKN3-206ENST00000541304 F8W031 263 aaPredicted RBP6.78□□□□□ -1.32
CDKN3-206ENST00000541304 ZNF213O14771 459 aa6.78□□□□□ -1.32
CDKN3-206ENST00000541304 TXLNAP40222 546 aa6.78□□□□□ -1.32
CDKN3-206ENST00000541304 DGKGP49619 791 aa6.78□□□□□ -1.32
CDKN3-206ENST00000541304 PRELPP51888 382 aa6.78□□□□□ -1.32
CDKN3-206ENST00000541304 PDE4BQ07343 736 aa6.78□□□□□ -1.32
CDKN3-206ENST00000541304 NECTIN1Q15223 517 aa6.78□□□□□ -1.32
CDKN3-206ENST00000541304 TEAD4Q15561 434 aa6.78□□□□□ -1.32
CDKN3-206ENST00000541304 CCDC178Q5BJE1 867 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms