RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 FAM208AQ9UK61 1670 aaKnown RBP8.73□□□□□ -1.01
TTR-203ENST00000541025 PTPN11Q06124 597 aaPredicted RBP8.73□□□□□ -1.01
TTR-203ENST00000541025 VPS72Q15906 364 aa8.73□□□□□ -1.01
TTR-203ENST00000541025 EAPPQ56P03 285 aaPredicted RBP8.73□□□□□ -1.01
TTR-203ENST00000541025 LRFN4Q6PJG9 635 aa8.73□□□□□ -1.01
TTR-203ENST00000541025 ATG4DQ86TL0 474 aaPredicted RBP8.73□□□□□ -1.01
TTR-203ENST00000541025 WNT10AQ9GZT5 417 aa8.73□□□□□ -1.01
TTR-203ENST00000541025 ABCC6O95255 1503 aa8.73□□□□□ -1.01
TTR-203ENST00000541025 LRRC37A3O60309 1634 aa8.72□□□□□ -1.01
TTR-203ENST00000541025 NSD3Q9BZ95 1437 aa8.72□□□□□ -1.01
TTR-203ENST00000541025 ANKRD33BA6NCL7 494 aa8.72□□□□□ -1.01
TTR-203ENST00000541025 EOMESO95936 686 aa8.72□□□□□ -1.01
TTR-203ENST00000541025 ITIH2P19823 946 aa8.72□□□□□ -1.01
TTR-203ENST00000541025 CAP2P40123 477 aa8.72□□□□□ -1.01
TTR-203ENST00000541025 ANGEL2Q5VTE6 544 aaKnown RBP8.72□□□□□ -1.01
TTR-203ENST00000541025 ARMCX6Q7L4S7 300 aa8.72□□□□□ -1.01
TTR-203ENST00000541025 UBE3DQ7Z6J8 389 aa8.72□□□□□ -1.01
TTR-203ENST00000541025 ASB11Q8WXH4 323 aa8.72□□□□□ -1.01
TTR-203ENST00000541025 PLPPR2Q96GM1 343 aa8.72□□□□□ -1.01
TTR-203ENST00000541025 POLR3GLQ9BT43 218 aa8.72□□□□□ -1.01
TTR-203ENST00000541025 FOXQ1Q9C009 403 aa8.72□□□□□ -1.01
TTR-203ENST00000541025 SBF2Q86WG5 1849 aa8.72□□□□□ -1.01
TTR-203ENST00000541025 AATKQ6ZMQ8 1374 aa8.72□□□□□ -1.01
TTR-203ENST00000541025 GNAT3A8MTJ3 354 aa8.71□□□□□ -1.02
TTR-203ENST00000541025 PAPLNO95428 1278 aa8.71□□□□□ -1.02
TTR-203ENST00000541025 CCDC85BQ15834 202 aaPredicted RBP8.71□□□□□ -1.02
TTR-203ENST00000541025 DNAJC14Q6Y2X3 702 aaPredicted RBP8.71□□□□□ -1.02
TTR-203ENST00000541025 ARHGEF25Q86VW2 580 aa8.71□□□□□ -1.02
TTR-203ENST00000541025 MFSD2AQ8NA29 543 aa8.71□□□□□ -1.02
TTR-203ENST00000541025 GAL3ST3Q96A11 431 aa8.71□□□□□ -1.02
TTR-203ENST00000541025 DUSP9Q99956 384 aaKnown RBP8.71□□□□□ -1.02
TTR-203ENST00000541025 MBNL3Q9NUK0 354 aaKnown RBP8.71□□□□□ -1.02
TTR-203ENST00000541025 TACC3Q9Y6A5 838 aa8.71□□□□□ -1.02
TTR-203ENST00000541025 SPATA31A5Q5VU36 1347 aa8.71□□□□□ -1.02
TTR-203ENST00000541025 SPATA31A7Q8IWB4 1347 aa8.71□□□□□ -1.02
TTR-203ENST00000541025 TNS1Q9HBL0 1735 aaKnown RBP8.71□□□□□ -1.02
TTR-203ENST00000541025 FYB1O15117 783 aa8.7□□□□□ -1.02
TTR-203ENST00000541025 RNASE1P07998 156 aaKnown RBP8.7□□□□□ -1.02
TTR-203ENST00000541025 LMNB1P20700 586 aa8.7□□□□□ -1.02
TTR-203ENST00000541025 FBLN1P23142 703 aa8.7□□□□□ -1.02
TTR-203ENST00000541025 SLC23A3Q6PIS1 610 aa8.7□□□□□ -1.02
TTR-203ENST00000541025 KCNH5Q8NCM2 988 aa8.7□□□□□ -1.02
TTR-203ENST00000541025 RC3H2Q9HBD1 1191 aaKnown RBP8.7□□□□□ -1.02
TTR-203ENST00000541025 PRDM5Q9NQX1 630 aaPredicted RBP8.7□□□□□ -1.02
TTR-203ENST00000541025 MAPK8IP1Q9UQF2 711 aa8.7□□□□□ -1.02
TTR-203ENST00000541025 SHANK3Q9BYB0 1731 aa8.7□□□□□ -1.02
TTR-203ENST00000541025 SPATA31A1Q5TZJ5 1347 aa8.7□□□□□ -1.02
TTR-203ENST00000541025 PRAMEF27A3QJZ7 478 aa8.69□□□□□ -1.02
TTR-203ENST00000541025 CD96P40200 585 aa8.69□□□□□ -1.02
TTR-203ENST00000541025 CLCN7P51798 805 aa8.69□□□□□ -1.02
TTR-203ENST00000541025 ETF1P62495 437 aaKnown RBP8.69□□□□□ -1.02
TTR-203ENST00000541025 SLBPQ14493 270 aaKnown RBP eCLIP8.69□□□□□ -1.02
TTR-203ENST00000541025 NKPD1Q17RQ9 610 aa8.69□□□□□ -1.02
TTR-203ENST00000541025 CCDC27Q2M243 656 aa8.69□□□□□ -1.02
TTR-203ENST00000541025 OGFOD2Q6N063 350 aa8.69□□□□□ -1.02
TTR-203ENST00000541025 AGMOQ6ZNB7 445 aa8.69□□□□□ -1.02
TTR-203ENST00000541025 HID1Q8IV36 788 aa8.69□□□□□ -1.02
TTR-203ENST00000541025 SPACA3Q8IXA5 215 aa8.69□□□□□ -1.02
TTR-203ENST00000541025 POU5F2Q8N7G0 328 aa8.69□□□□□ -1.02
TTR-203ENST00000541025 USP35Q9P2H5 1018 aa8.69□□□□□ -1.02
TTR-203ENST00000541025 KIF7Q2M1P5 1343 aa8.69□□□□□ -1.02
TTR-203ENST00000541025 RGPD1P0DJD0 1748 aa8.68□□□□□ -1.02
TTR-203ENST00000541025 SLITRK5O94991 958 aa8.68□□□□□ -1.02
TTR-203ENST00000541025 RLBP1P12271 317 aa8.68□□□□□ -1.02
TTR-203ENST00000541025 EVA1CP58658 441 aa8.68□□□□□ -1.02
TTR-203ENST00000541025 WIPI1Q5MNZ9 446 aaPredicted RBP8.68□□□□□ -1.02
TTR-203ENST00000541025 ADAMTS6Q9UKP5 1117 aa8.68□□□□□ -1.02
TTR-203ENST00000541025 CRB1P82279 1406 aa8.68□□□□□ -1.02
TTR-203ENST00000541025 BTBD11A6QL63 1104 aa8.67□□□□□ -1.02
TTR-203ENST00000541025 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.67□□□□□ -1.02
TTR-203ENST00000541025 C22orf34Q6ZV56 151 aa8.67□□□□□ -1.02
TTR-203ENST00000541025 COG3Q96JB2 828 aa8.67□□□□□ -1.02
TTR-203ENST00000541025 FBRSQ9HAH7 460 aa8.67□□□□□ -1.02
TTR-203ENST00000541025 LMCD1Q9NZU5 365 aa8.67□□□□□ -1.02
TTR-203ENST00000541025 PCDHB5Q9Y5E4 795 aa8.67□□□□□ -1.02
TTR-203ENST00000541025 MAP3K19Q56UN5 1328 aa8.66□□□□□ -1.02
TTR-203ENST00000541025 WDR17Q8IZU2 1322 aa8.66□□□□□ -1.02
TTR-203ENST00000541025 GFRA2O00451 464 aa8.66□□□□□ -1.02
TTR-203ENST00000541025 SFRP5Q5T4F7 317 aa8.66□□□□□ -1.02
TTR-203ENST00000541025 ZNF746Q6NUN9 644 aaPredicted RBP8.66□□□□□ -1.02
TTR-203ENST00000541025 PANK3Q9H999 370 aa8.66□□□□□ -1.02
TTR-203ENST00000541025 PARP2Q9UGN5 583 aa8.66□□□□□ -1.02
TTR-203ENST00000541025 TPX2Q9ULW0 747 aaKnown RBP8.66□□□□□ -1.02
TTR-203ENST00000541025 BLMP54132 1417 aaPredicted RBP8.65□□□□□ -1.02
TTR-203ENST00000541025 CCDC7Q96M83 1385 aa8.65□□□□□ -1.02
TTR-203ENST00000541025 WASHC2AQ641Q2 1341 aa8.65□□□□□ -1.02
TTR-203ENST00000541025 CST3P01034 146 aaPredicted RBP8.65□□□□□ -1.02
TTR-203ENST00000541025 LIG3P49916 1009 aa8.65□□□□□ -1.02
TTR-203ENST00000541025 DAB2P98082 770 aa8.65□□□□□ -1.02
TTR-203ENST00000541025 IKZF1Q13422 519 aa8.65□□□□□ -1.02
TTR-203ENST00000541025 RRS1Q15050 365 aaKnown RBP8.65□□□□□ -1.02
TTR-203ENST00000541025 NKG7Q16617 165 aa8.65□□□□□ -1.02
TTR-203ENST00000541025 TMCO4Q5TGY1 634 aa8.65□□□□□ -1.02
TTR-203ENST00000541025 NPAS4Q8IUM7 802 aa8.65□□□□□ -1.02
TTR-203ENST00000541025 LRRN4CLQ8ND94 238 aa8.65□□□□□ -1.02
TTR-203ENST00000541025 MIR1-1HGQ9H1L0 117 aa8.65□□□□□ -1.02
TTR-203ENST00000541025 RNF19AQ9NV58 838 aa8.65□□□□□ -1.02
TTR-203ENST00000541025 DISP2A7MBM2 1401 aa8.64□□□□□ -1.03
TTR-203ENST00000541025 PITPNM2Q9BZ72 1349 aa8.64□□□□□ -1.03
TTR-203ENST00000541025 FAM155AB1AL88 458 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms