RNA–Protein interactions for RNA: ENST00000540394.5

C1R-206, Transcript of complement C1r, humanhuman

TSL 2

Gene C1R, Length 3,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-206ENST00000540394 TMEM260Q9NX78 707 aa13.11□□□□□ -0.31
C1R-206ENST00000540394 PCDHA4Q9UN74 947 aa13.11□□□□□ -0.31
C1R-206ENST00000540394 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
C1R-206ENST00000540394 BLIDQ8IZY5 108 aa13.1□□□□□ -0.31
C1R-206ENST00000540394 SH3GLB2Q9NR46 395 aa13.1□□□□□ -0.31
C1R-206ENST00000540394 TMEM232C9JQI7 657 aa13.1□□□□□ -0.31
C1R-206ENST00000540394 SPTLC2O15270 562 aa13.1□□□□□ -0.31
C1R-206ENST00000540394 MBD3O95983 291 aa13.1□□□□□ -0.31
C1R-206ENST00000540394 ME1P48163 572 aa13.1□□□□□ -0.31
C1R-206ENST00000540394 SPECC1Q5M775 1068 aa13.1□□□□□ -0.31
C1R-206ENST00000540394 GPATCH4Q5T3I0 446 aaKnown RBP13.1□□□□□ -0.31
C1R-206ENST00000540394 DCAF4Q8WV16 495 aa13.1□□□□□ -0.31
C1R-206ENST00000540394 ZNF341Q9BYN7 854 aa13.1□□□□□ -0.31
C1R-206ENST00000540394 ZNF112Q9UJU3 913 aa13.1□□□□□ -0.31
C1R-206ENST00000540394 QRICH1Q2TAL8 776 aa13.1□□□□□ -0.31
C1R-206ENST00000540394 ENGASEQ8NFI3 743 aa13.1□□□□□ -0.31
C1R-206ENST00000540394 L3MBTL3Q96JM7 780 aaPredicted RBP13.1□□□□□ -0.31
C1R-206ENST00000540394 DACT1Q9NYF0 836 aa13.1□□□□□ -0.31
C1R-206ENST00000540394 A0A1B0GVL5 298 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 OPLAHO14841 1288 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 YEATS4O95619 227 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 NAPAP54920 295 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 FMR1Q06787 632 aaKnown RBP eCLIP13.09□□□□□ -0.31
C1R-206ENST00000540394 CAMK4Q16566 473 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 SHC4Q6S5L8 630 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 APOBEC3FQ8IUX4 373 aaKnown RBP13.09□□□□□ -0.31
C1R-206ENST00000540394 SMCO2A6NFE2 343 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 SAFBQ15424 915 aaKnown RBP eCLIP13.09□□□□□ -0.31
C1R-206ENST00000540394 IL17AQ16552 155 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 ATL3Q6DD88 541 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 KLRG1Q96E93 195 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 WRNIP1Q96S55 665 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 ISY1Q9ULR0 285 aaKnown RBP13.09□□□□□ -0.31
C1R-206ENST00000540394 FSD2A1L4K1 749 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 ZBTB5O15062 677 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 ASNSP08243 561 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 BMP3P12645 472 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 NDUFA8P51970 172 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 STK38Q15208 465 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 CDC37Q16543 378 aaPredicted RBP13.09□□□□□ -0.31
C1R-206ENST00000540394 USP49Q70CQ1 688 aa13.09□□□□□ -0.31
C1R-206ENST00000540394 PNMA6FA0A0J9YX94 578 aa13.08□□□□□ -0.32
C1R-206ENST00000540394 XBP1P17861 261 aa13.08□□□□□ -0.32
C1R-206ENST00000540394 UBE2SQ16763 222 aa13.08□□□□□ -0.32
C1R-206ENST00000540394 MOB2Q70IA6 237 aa13.08□□□□□ -0.32
C1R-206ENST00000540394 CCAR1Q8IX12 1150 aaKnown RBP13.08□□□□□ -0.32
C1R-206ENST00000540394 DAGLBQ8NCG7 672 aa13.08□□□□□ -0.32
C1R-206ENST00000540394 ERCC4Q92889 916 aaPredicted RBP13.08□□□□□ -0.32
C1R-206ENST00000540394 VCPKMTQ9H867 229 aa13.08□□□□□ -0.32
C1R-206ENST00000540394 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.08□□□□□ -0.32
C1R-206ENST00000540394 BIN2Q9UBW5 565 aaPredicted RBP13.08□□□□□ -0.32
C1R-206ENST00000540394 PRR12Q9ULL5 1215 aa13.08□□□□□ -0.32
C1R-206ENST00000540394 GLTPD2A6NH11 291 aa13.08□□□□□ -0.32
C1R-206ENST00000540394 CTNND1O60716 968 aaKnown RBP13.08□□□□□ -0.32
C1R-206ENST00000540394 USP2O75604 605 aaPredicted RBP13.08□□□□□ -0.32
C1R-206ENST00000540394 ZNF174Q15697 407 aa13.08□□□□□ -0.32
C1R-206ENST00000540394 SEC63Q9UGP8 760 aaKnown RBP13.08□□□□□ -0.32
C1R-206ENST00000540394 FBXO2Q9UK22 296 aaPredicted RBP13.08□□□□□ -0.32
C1R-206ENST00000540394 MTMR2Q13614 643 aa13.08□□□□□ -0.32
C1R-206ENST00000540394 RILPL1Q5EBL4 403 aa13.08□□□□□ -0.32
C1R-206ENST00000540394 ADALQ6DHV7 355 aa13.08□□□□□ -0.32
C1R-206ENST00000540394 WNK4Q96J92 1243 aa13.08□□□□□ -0.32
C1R-206ENST00000540394 ARHGEF10LQ9HCE6 1279 aa13.08□□□□□ -0.32
C1R-206ENST00000540394 ZNF445P59923 1031 aa13.07□□□□□ -0.32
C1R-206ENST00000540394 INF2Q27J81 1249 aa13.07□□□□□ -0.32
C1R-206ENST00000540394 BTNL9Q6UXG8 535 aa13.07□□□□□ -0.32
C1R-206ENST00000540394 C4orf32Q8N8J7 132 aa13.07□□□□□ -0.32
C1R-206ENST00000540394 BICD2Q8TD16 824 aa13.07□□□□□ -0.32
C1R-206ENST00000540394 EMILIN3Q9NT22 766 aa13.07□□□□□ -0.32
C1R-206ENST00000540394 PITPNM2Q9BZ72 1349 aa13.07□□□□□ -0.32
C1R-206ENST00000540394 RBBP6Q7Z6E9 1792 aaKnown RBP13.07□□□□□ -0.32
C1R-206ENST00000540394 A0A087WWV3 80 aa13.07□□□□□ -0.32
C1R-206ENST00000540394 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.07□□□□□ -0.32
C1R-206ENST00000540394 PTPRAP18433 802 aa13.07□□□□□ -0.32
C1R-206ENST00000540394 EPHX2P34913 555 aa13.07□□□□□ -0.32
C1R-206ENST00000540394 CLK2P49760 499 aaKnown RBP13.07□□□□□ -0.32
C1R-206ENST00000540394 LMOD1P29536 600 aaPredicted RBP13.06□□□□□ -0.32
C1R-206ENST00000540394 USH1GQ495M9 461 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.06□□□□□ -0.32
C1R-206ENST00000540394 FMR1NBQ8N0W7 255 aaPredicted RBP13.06□□□□□ -0.32
C1R-206ENST00000540394 KCNG4Q8TDN1 519 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 CSPP1Q1MSJ5 1256 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 SYDE2Q5VT97 1194 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 JAKMIP3Q5VZ66 844 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.06□□□□□ -0.32
C1R-206ENST00000540394 USP17L15C9J2P7 530 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 USP17L13C9JLJ4 530 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 USP17L11C9JVI0 530 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 USP17L18D6R9N7 530 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 USP17L22D6RA61 530 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 USP17L17D6RBQ6 530 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 USP17L19D6RCP7 530 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 USP17L20D6RJB6 530 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 PPP6R2O75170 966 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 STAT2P52630 851 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 USP17L24Q0WX57 530 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 USP17L6PQ6QN14 398 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 SCYL3Q8IZE3 742 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 FUCA2Q9BTY2 467 aa13.06□□□□□ -0.32
C1R-206ENST00000540394 TMEM60Q9H2L4 133 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms