RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 ASTN1O14525 1302 aa18.75■□□□□ 0.59
PUDP-206ENST00000540122 PNMA6EA0A0J9YXQ4 647 aa18.75■□□□□ 0.59
PUDP-206ENST00000540122 DEFB128Q7Z7B8 93 aa18.75■□□□□ 0.59
PUDP-206ENST00000540122 KATNBL1Q9H079 304 aa18.75■□□□□ 0.59
PUDP-206ENST00000540122 RIPK3Q9Y572 518 aa18.75■□□□□ 0.59
PUDP-206ENST00000540122 COL4A4P53420 1690 aaPredicted RBP18.75■□□□□ 0.59
PUDP-206ENST00000540122 NAV1Q8NEY1 1877 aa18.75■□□□□ 0.59
PUDP-206ENST00000540122 CYP2D6P10635 497 aa18.74■□□□□ 0.59
PUDP-206ENST00000540122 LEXMQ3ZCV2 418 aa18.74■□□□□ 0.59
PUDP-206ENST00000540122 SNRNP48Q6IEG0 339 aaKnown RBP18.74■□□□□ 0.59
PUDP-206ENST00000540122 ARMCX2Q7L311 632 aa18.74■□□□□ 0.59
PUDP-206ENST00000540122 HERC6Q8IVU3 1022 aa18.74■□□□□ 0.59
PUDP-206ENST00000540122 PHOSPHO2Q8TCD6 241 aa18.74■□□□□ 0.59
PUDP-206ENST00000540122 SEZ6LQ9BYH1 1024 aa18.74■□□□□ 0.59
PUDP-206ENST00000540122 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.73■□□□□ 0.59
PUDP-206ENST00000540122 E9PSI1 815 aa18.73■□□□□ 0.59
PUDP-206ENST00000540122 FAM83BQ5T0W9 1011 aa18.73■□□□□ 0.59
PUDP-206ENST00000540122 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.73■□□□□ 0.59
PUDP-206ENST00000540122 DYNLL2Q96FJ2 89 aa18.73■□□□□ 0.59
PUDP-206ENST00000540122 SWAP70Q9UH65 585 aa18.73■□□□□ 0.59
PUDP-206ENST00000540122 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.72■□□□□ 0.59
PUDP-206ENST00000540122 MAGEB6P1A0A0J9YX57 407 aa18.72■□□□□ 0.59
PUDP-206ENST00000540122 KIF28PB7ZC32 967 aa18.72■□□□□ 0.59
PUDP-206ENST00000540122 DCXO43602 365 aa18.72■□□□□ 0.59
PUDP-206ENST00000540122 ACTN1P12814 892 aa18.72■□□□□ 0.59
PUDP-206ENST00000540122 EEF2P13639 858 aaKnown RBP18.72■□□□□ 0.59
PUDP-206ENST00000540122 IL9P15248 144 aa18.72■□□□□ 0.59
PUDP-206ENST00000540122 PSMC6P62333 389 aa18.72■□□□□ 0.59
PUDP-206ENST00000540122 TNFAIP2Q03169 654 aa18.72■□□□□ 0.59
PUDP-206ENST00000540122 FSCN1Q16658 493 aaKnown RBP18.72■□□□□ 0.59
PUDP-206ENST00000540122 NOL8Q76FK4 1167 aaKnown RBP18.72■□□□□ 0.59
PUDP-206ENST00000540122 TLK2Q86UE8 772 aa18.72■□□□□ 0.59
PUDP-206ENST00000540122 GDPD5Q8WTR4 605 aa18.72■□□□□ 0.59
PUDP-206ENST00000540122 PHOX2BQ99453 314 aa18.72■□□□□ 0.59
PUDP-206ENST00000540122 ANTXR1Q9H6X2 564 aa18.72■□□□□ 0.59
PUDP-206ENST00000540122 LMCD1Q9NZU5 365 aa18.72■□□□□ 0.59
PUDP-206ENST00000540122 DBNLQ9UJU6 430 aaKnown RBP18.72■□□□□ 0.59
PUDP-206ENST00000540122 BRWD1Q9NSI6 2320 aa18.72■□□□□ 0.59
PUDP-206ENST00000540122 KCNA5P22460 613 aa18.71■□□□□ 0.59
PUDP-206ENST00000540122 TMED8Q6PL24 325 aaPredicted RBP18.71■□□□□ 0.59
PUDP-206ENST00000540122 CCDC144CPQ8IYA2 1237 aa18.71■□□□□ 0.59
PUDP-206ENST00000540122 CRNKL1Q9BZJ0 848 aaKnown RBP18.71■□□□□ 0.59
PUDP-206ENST00000540122 ALDH8A1Q9H2A2 487 aaPredicted RBP18.71■□□□□ 0.59
PUDP-206ENST00000540122 TLR7Q9NYK1 1049 aaKnown RBP18.71■□□□□ 0.59
PUDP-206ENST00000540122 GNEQ9Y223 722 aaKnown RBP18.71■□□□□ 0.59
PUDP-206ENST00000540122 CYP2C9P11712 490 aa18.7■□□□□ 0.58
PUDP-206ENST00000540122 PTGS1P23219 599 aa18.7■□□□□ 0.58
PUDP-206ENST00000540122 SLC4A3P48751 1232 aa18.7■□□□□ 0.58
PUDP-206ENST00000540122 PTCRAQ6ISU1 281 aaPredicted RBP18.7■□□□□ 0.58
PUDP-206ENST00000540122 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.7■□□□□ 0.58
PUDP-206ENST00000540122 ANKS1AQ92625 1134 aa18.7■□□□□ 0.58
PUDP-206ENST00000540122 SLF1Q9BQI6 1058 aa18.7■□□□□ 0.58
PUDP-206ENST00000540122 GOPCQ9HD26 462 aa18.7■□□□□ 0.58
PUDP-206ENST00000540122 TRMT13Q9NUP7 481 aaKnown RBP18.7■□□□□ 0.58
PUDP-206ENST00000540122 ZNF536O15090 1300 aa18.7■□□□□ 0.58
PUDP-206ENST00000540122 POTEB3A0JP26 581 aa18.69■□□□□ 0.58
PUDP-206ENST00000540122 RAD21O60216 631 aa18.69■□□□□ 0.58
PUDP-206ENST00000540122 ZEB2O60315 1214 aa18.69■□□□□ 0.58
PUDP-206ENST00000540122 POTEBQ6S5H4 581 aa18.69■□□□□ 0.58
PUDP-206ENST00000540122 ANKRD35Q8N283 1001 aa18.69■□□□□ 0.58
PUDP-206ENST00000540122 SDR42E1Q8WUS8 393 aa18.69■□□□□ 0.58
PUDP-206ENST00000540122 DCP1AQ9NPI6 582 aaPredicted RBP18.69■□□□□ 0.58
PUDP-206ENST00000540122 MCM3APO60318 1980 aa18.69■□□□□ 0.58
PUDP-206ENST00000540122 USP34Q70CQ2 3546 aa18.69■□□□□ 0.58
PUDP-206ENST00000540122 LCHNA4D1U4 455 aa18.68■□□□□ 0.58
PUDP-206ENST00000540122 ST18O60284 1047 aa18.68■□□□□ 0.58
PUDP-206ENST00000540122 GNAI2P04899 355 aa18.68■□□□□ 0.58
PUDP-206ENST00000540122 OS9Q13438 667 aaPredicted RBP18.68■□□□□ 0.58
PUDP-206ENST00000540122 HFE2Q6ZVN8 426 aa18.68■□□□□ 0.58
PUDP-206ENST00000540122 CCDC17Q96LX7 622 aa18.68■□□□□ 0.58
PUDP-206ENST00000540122 NUP88Q99567 741 aaPredicted RBP18.68■□□□□ 0.58
PUDP-206ENST00000540122 AP5M1Q9H0R1 490 aa18.68■□□□□ 0.58
PUDP-206ENST00000540122 GRXCR2A6NFK2 248 aa18.67■□□□□ 0.58
PUDP-206ENST00000540122 ATP2A1O14983 1001 aa18.67■□□□□ 0.58
PUDP-206ENST00000540122 DYNC1LI2O43237 492 aaPredicted RBP18.67■□□□□ 0.58
PUDP-206ENST00000540122 SUPT20HL2P0C7V6 817 aa18.67■□□□□ 0.58
PUDP-206ENST00000540122 RFC2P35250 354 aa18.67■□□□□ 0.58
PUDP-206ENST00000540122 SLFN5Q08AF3 891 aa18.67■□□□□ 0.58
PUDP-206ENST00000540122 FAM9BQ8IZU0 186 aa18.67■□□□□ 0.58
PUDP-206ENST00000540122 CPXCR1Q8N123 301 aa18.67■□□□□ 0.58
PUDP-206ENST00000540122 CCDC8Q9H0W5 538 aaPredicted RBP18.67■□□□□ 0.58
PUDP-206ENST00000540122 KANSL2Q9H9L4 492 aa18.67■□□□□ 0.58
PUDP-206ENST00000540122 TNKSO95271 1327 aa18.67■□□□□ 0.58
PUDP-206ENST00000540122 SCN5AQ14524 2016 aa18.66■□□□□ 0.58
PUDP-206ENST00000540122 SMPD1P17405 629 aa18.66■□□□□ 0.58
PUDP-206ENST00000540122 SUGCTQ9HAC7 445 aa18.66■□□□□ 0.58
PUDP-206ENST00000540122 ZNF318Q5VUA4 2279 aa18.66■□□□□ 0.58
PUDP-206ENST00000540122 CDK8P49336 464 aa18.65■□□□□ 0.58
PUDP-206ENST00000540122 CNTN2Q02246 1040 aa18.65■□□□□ 0.58
PUDP-206ENST00000540122 LCORLQ8N3X6 602 aa18.65■□□□□ 0.58
PUDP-206ENST00000540122 FTOQ9C0B1 505 aaKnown RBP eCLIP18.65■□□□□ 0.58
PUDP-206ENST00000540122 RAVER2Q9HCJ3 691 aaKnown RBP18.65■□□□□ 0.58
PUDP-206ENST00000540122 FBXO40Q9UH90 709 aa18.65■□□□□ 0.58
PUDP-206ENST00000540122 MTUS1Q9ULD2 1270 aa18.65■□□□□ 0.58
PUDP-206ENST00000540122 BAIAP3O94812 1187 aa18.64■□□□□ 0.57
PUDP-206ENST00000540122 POLA2Q14181 598 aa18.64■□□□□ 0.57
PUDP-206ENST00000540122 PUS10Q3MIT2 529 aaKnown RBP18.64■□□□□ 0.57
PUDP-206ENST00000540122 PRPF38AQ8NAV1 312 aaKnown RBP18.64■□□□□ 0.57
PUDP-206ENST00000540122 CHST13Q8NET6 341 aa18.64■□□□□ 0.57
PUDP-206ENST00000540122 MFSD14AQ96MC6 490 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms