RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 ZNF214Q9UL59 606 aaPredicted RBP8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 ISY1Q9ULR0 285 aaKnown RBP8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 NID2Q14112 1375 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 ZNF536O15090 1300 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 ATP2A1O14983 1001 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 PARP1P09874 1014 aaKnown RBP8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 SLC16A2P36021 539 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 PSMC4P43686 418 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 IKQ13123 557 aaPredicted RBP8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 KIF22Q14807 665 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 GRM4Q14833 912 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 SYDE2Q5VT97 1194 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 TTBK2Q6IQ55 1244 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 APOA5Q6Q788 366 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 RUFY3Q7L099 469 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 OTOP1Q7RTM1 612 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 CTU1Q7Z7A3 348 aaKnown RBP8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 STAG2Q8N3U4 1231 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 FBXL16Q8N461 479 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 CHURC1Q8WUH1 139 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 MYL10Q9BUA6 226 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 MOV10L1Q9BXT6 1211 aaKnown RBP8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 AGXT2Q9BYV1 514 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 SPATC1LQ9H0A9 340 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 RANBP17Q9H2T7 1088 aaKnown RBP8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 ZSWIM6Q9HCJ5 1215 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 GPCPD1Q9NPB8 672 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 MAD2L2Q9UI95 211 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 PRR12Q9ULL5 1215 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 BRCA2P51587 3418 aa8.15□□□□□ -1.1
LPCAT3-209ENST00000540060 PALM3A6NDB9 673 aaPredicted RBP8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 CCDC69A6NI79 296 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 TNPO2O14787 897 aaKnown RBP8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 RGS20O76081 388 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 ECM2O94769 699 aaPredicted RBP8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 GNRH1P01148 92 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 FDX1P10109 184 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 HOXB1P14653 301 aaPredicted RBP8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 MAPK4P31152 587 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 OAZ1P54368 228 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 FCGRTP55899 365 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 CCNA1P78396 465 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 COL13A1Q5TAT6 717 aaPredicted RBP8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 SNRNP48Q6IEG0 339 aaKnown RBP8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 NFXL1Q6ZNB6 911 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 Q6ZUG5 572 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 GPR142Q7Z601 462 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 CATIPQ7Z7H3 387 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 RIOX2Q8IUF8 465 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 TMTC2Q8N394 836 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 SHCBP1Q8NEM2 672 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 MAP3K14Q99558 947 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 TEX13BQ9BXU2 312 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 UPF3BQ9BZI7 483 aaKnown RBP8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 CPVLQ9H3G5 476 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 EFCC1Q9HA90 598 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 BRPF3Q9ULD4 1205 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 TRIM17Q9Y577 477 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 SLC12A7Q9Y666 1083 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 CYP46A1Q9Y6A2 500 aa8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 BAZ2BQ9UIF8 2168 aaKnown RBP8.14□□□□□ -1.11
LPCAT3-209ENST00000540060 MCM3APO60318 1980 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 KLF18A0A0U1RQI7 1052 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 KLRF2D3W0D1 207 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 ZBED4O75132 1171 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 FMNL1O95466 1100 aaPredicted RBP8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 SLC25A27O95847 323 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 CALM1P0DP23 149 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 CALM2P0DP24 149 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 CALM3P0DP25 149 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 ERCC3P19447 782 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 RXRAP19793 462 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 STAT3P40763 770 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 RBM25P49756 843 aaKnown RBP8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 RCAN1P53805 252 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 SNAP25P60880 206 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 PRKCZQ05513 592 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 TOB2Q14106 344 aaPredicted RBP8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 PLS1Q14651 629 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 ARHGEF6Q15052 776 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 SLC35G1Q2M3R5 365 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 MICU3Q86XE3 530 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 ADGRF4Q8IZF3 695 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 CTCFLQ8NI51 663 aaPredicted RBP8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 NUP133Q8WUM0 1156 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 BRF1Q92994 677 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 UBA5Q9GZZ9 404 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 RAVER2Q9HCJ3 691 aaKnown RBP8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 SRRDQ9UH36 339 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 RIPK3Q9Y572 518 aa8.13□□□□□ -1.11
LPCAT3-209ENST00000540060 GOLGA8BA8MQT2 603 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 ZBTB43O43298 467 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 CYTH3O43739 400 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 PLEKHA8P1O95397 391 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 ICAM1P05362 532 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 TAL1P17542 331 aaPredicted RBP8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 KIF5BP33176 963 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 COPB2P35606 906 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 PRMT2P55345 433 aa8.12□□□□□ -1.11
LPCAT3-209ENST00000540060 EVCP57679 992 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms