RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 MIS18AQ9NYP9 233 aa6.8□□□□□ -1.32
SNHG1-211ENST00000539921 TUBE1Q9UJT0 475 aa6.8□□□□□ -1.32
SNHG1-211ENST00000539921 CEP170BQ9Y4F5 1589 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-211ENST00000539921 SAMM50Q9Y512 469 aa6.8□□□□□ -1.32
SNHG1-211ENST00000539921 PREX2Q70Z35 1606 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 ATP10BO94823 1461 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 USP42Q9H9J4 1324 aaKnown RBP6.79□□□□□ -1.32
SNHG1-211ENST00000539921 DPPA5A6NC42 116 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 DNM1LO00429 736 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 SLC27A2O14975 620 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 KDM1AO60341 852 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 VAMP4O75379 141 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 YEATS4O95619 227 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 CCDC159P0C7I6 412 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 PRLRP16471 622 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 ABL2P42684 1182 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 MAGEA10P43363 369 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-211ENST00000539921 ATN1P54259 1190 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-211ENST00000539921 ARPC4P59998 168 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 LACTBP83111 547 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-211ENST00000539921 PDE1BQ01064 536 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 PDCLQ13371 301 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 MAP7Q14244 749 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 CNGA3Q16281 694 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 FOXD4L6Q3SYB3 417 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-211ENST00000539921 DAB2IPQ5VWQ8 1189 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 C16orf87Q6PH81 154 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 FOXD4L3Q6VB84 417 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-211ENST00000539921 CDC37L1Q7L3B6 337 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 TMTC1Q8IUR5 882 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 GPIHBP1Q8IV16 184 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 CNGA4Q8IV77 575 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 SYCP3Q8IZU3 236 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 WHAMMQ8TF30 809 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 ATP8B4Q8TF62 1192 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 SPIRE2Q8WWL2 714 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 HVCN1Q96D96 273 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 ATP6V1G3Q96LB4 118 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 FGD4Q96M96 766 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 PUS3Q9BZE2 481 aaKnown RBP6.79□□□□□ -1.32
SNHG1-211ENST00000539921 UBE2OQ9C0C9 1292 aaKnown RBP6.79□□□□□ -1.32
SNHG1-211ENST00000539921 LSG1Q9H089 658 aaKnown RBP6.79□□□□□ -1.32
SNHG1-211ENST00000539921 EPB41L1Q9H4G0 881 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 HAUS4Q9H6D7 363 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 RETREG1Q9H6L5 497 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 SNRKQ9NRH2 765 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 EXOC1Q9NV70 894 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 PCMTD2Q9NV79 361 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 AATFQ9NY61 560 aaKnown RBP eCLIP6.79□□□□□ -1.321e-323■■■□□ 16.4
SNHG1-211ENST00000539921 BAIAP2L1Q9UHR4 511 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 DACH1Q9UI36 760 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 SCOCQ9UIL1 159 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 PREX1Q8TCU6 1659 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 PNPLA6Q8IY17 1366 aa6.79□□□□□ -1.32
SNHG1-211ENST00000539921 RIMS2Q9UQ26 1411 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 FAM237AA0A1B0GTK4 181 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 CCT8L1PA6NM43 557 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 E7EVH7 732 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 ASAP2O43150 1006 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 ACTN4O43707 911 aaKnown RBP6.78□□□□□ -1.32
SNHG1-211ENST00000539921 ATP9BO43861 1147 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 LMNAP02545 664 aaKnown RBP6.78□□□□□ -1.32
SNHG1-211ENST00000539921 RHOXF2BP0C7M4 288 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 SP100P23497 879 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-211ENST00000539921 GBP1P32455 592 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 GPSM2P81274 684 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 ATP11AP98196 1134 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 HDLBPQ00341 1268 aaKnown RBP6.78□□□□□ -1.32
SNHG1-211ENST00000539921 ADAM9Q13443 819 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 CAMK2BQ13554 666 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 NONOQ15233 471 aaKnown RBP eCLIP6.78□□□□□ -1.32
SNHG1-211ENST00000539921 TAF11Q15544 211 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 CCDC153Q494R4 210 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 TMEM259Q4ZIN3 620 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 SPDYCQ5MJ68 293 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 AGBL2Q5U5Z8 902 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 ARMC3Q5W041 872 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 THOC7Q6I9Y2 204 aaKnown RBP6.78□□□□□ -1.32
SNHG1-211ENST00000539921 HIBCHQ6NVY1 386 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-211ENST00000539921 UNC13DQ70J99 1090 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 GET4Q7L5D6 327 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-211ENST00000539921 ZNF554Q86TJ5 538 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 IQCKQ8N0W5 287 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 CNBD1Q8NA66 436 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 MLKLQ8NB16 471 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 RETREG2Q8NC44 543 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 ZNF280CQ8ND82 737 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 KCNG4Q8TDN1 519 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 AGAP11Q8TF27 550 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 TSR2Q969E8 191 aaKnown RBP6.78□□□□□ -1.32
SNHG1-211ENST00000539921 ZMAT2Q96NC0 199 aaKnown RBP6.78□□□□□ -1.32
SNHG1-211ENST00000539921 OLFM3Q96PB7 478 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 SH3GL1Q99961 368 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 SLF1Q9BQI6 1058 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 RHOXF2Q9BQY4 288 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 CARD14Q9BXL6 1004 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 TAF1DQ9H5J8 278 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-211ENST00000539921 C19orf44Q9H6X5 657 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 JADE2Q9NQC1 790 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 CABP1Q9NZU7 370 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms