RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 ZNF174Q15697 407 aa23.07■■□□□ 1.28
PACSIN3-211ENST00000539589 TYW1BQ6NUM6 668 aa23.07■■□□□ 1.28
PACSIN3-211ENST00000539589 PIK3AP1Q6ZUJ8 805 aa23.07■■□□□ 1.28
PACSIN3-211ENST00000539589 GPKOWQ92917 476 aaPredicted RBP eCLIP23.07■■□□□ 1.28
PACSIN3-211ENST00000539589 HACL1Q9UJ83 578 aa23.07■■□□□ 1.28
PACSIN3-211ENST00000539589 PCDHA5Q9Y5H7 936 aa23.07■■□□□ 1.28
PACSIN3-211ENST00000539589 MAP3K10Q02779 954 aa23.06■■□□□ 1.28
PACSIN3-211ENST00000539589 ICA1Q05084 483 aa23.06■■□□□ 1.28
PACSIN3-211ENST00000539589 POSTNQ15063 836 aa23.06■■□□□ 1.28
PACSIN3-211ENST00000539589 ISM2Q6H9L7 571 aa23.06■■□□□ 1.28
PACSIN3-211ENST00000539589 GPC2Q8N158 579 aa23.06■■□□□ 1.28
PACSIN3-211ENST00000539589 TRPM4Q8TD43 1214 aa23.06■■□□□ 1.28
PACSIN3-211ENST00000539589 CCDC34Q96HJ3 373 aa23.06■■□□□ 1.28
PACSIN3-211ENST00000539589 NRBP1Q9UHY1 535 aa23.06■■□□□ 1.28
PACSIN3-211ENST00000539589 ZNF543Q08ER8 600 aa23.06■■□□□ 1.28
PACSIN3-211ENST00000539589 NOM1Q5C9Z4 860 aaKnown RBP23.06■■□□□ 1.28
PACSIN3-211ENST00000539589 BLIDQ8IZY5 108 aa23.06■■□□□ 1.28
PACSIN3-211ENST00000539589 RIOX1Q9H6W3 641 aa23.06■■□□□ 1.28
PACSIN3-211ENST00000539589 GPRC5DQ9NZD1 345 aa23.06■■□□□ 1.28
PACSIN3-211ENST00000539589 SERTAD1Q9UHV2 236 aa23.06■■□□□ 1.28
PACSIN3-211ENST00000539589 PCDHA4Q9UN74 947 aa23.06■■□□□ 1.28
PACSIN3-211ENST00000539589 ATAD5Q96QE3 1844 aa23.05■■□□□ 1.28
PACSIN3-211ENST00000539589 SMARCA1P28370 1054 aa23.05■■□□□ 1.28
PACSIN3-211ENST00000539589 ATP2C1P98194 919 aaPredicted RBP23.05■■□□□ 1.28
PACSIN3-211ENST00000539589 ASPRV1Q53RT3 343 aa23.05■■□□□ 1.28
PACSIN3-211ENST00000539589 GALNT17Q6IS24 598 aa23.05■■□□□ 1.28
PACSIN3-211ENST00000539589 FAM177A1Q8N128 213 aaPredicted RBP23.05■■□□□ 1.28
PACSIN3-211ENST00000539589 CCDC148Q8NFR7 591 aa23.05■■□□□ 1.28
PACSIN3-211ENST00000539589 KIAA1524Q8TCG1 905 aa23.05■■□□□ 1.28
PACSIN3-211ENST00000539589 GPCPD1Q9NPB8 672 aa23.05■■□□□ 1.28
PACSIN3-211ENST00000539589 TNNI2P48788 182 aa23.04■■□□□ 1.28
PACSIN3-211ENST00000539589 PPP4R3BQ5MIZ7 849 aa23.04■■□□□ 1.28
PACSIN3-211ENST00000539589 WWC2Q6AWC2 1192 aa23.04■■□□□ 1.28
PACSIN3-211ENST00000539589 TTBK2Q6IQ55 1244 aa23.04■■□□□ 1.28
PACSIN3-211ENST00000539589 VAT1LQ9HCJ6 419 aa23.04■■□□□ 1.28
PACSIN3-211ENST00000539589 SPTLC3Q9NUV7 552 aa23.04■■□□□ 1.28
PACSIN3-211ENST00000539589 A0A1W2PRG0 241 aa23.04■■□□□ 1.28
PACSIN3-211ENST00000539589 H7C1D1 291 aa23.04■■□□□ 1.28
PACSIN3-211ENST00000539589 WNT7AO00755 349 aa23.04■■□□□ 1.28
PACSIN3-211ENST00000539589 PTGDRQ13258 359 aa23.04■■□□□ 1.28
PACSIN3-211ENST00000539589 USP49Q70CQ1 688 aa23.04■■□□□ 1.28
PACSIN3-211ENST00000539589 PDILTQ8N807 584 aa23.04■■□□□ 1.28
PACSIN3-211ENST00000539589 RNF181Q9P0P0 153 aa23.04■■□□□ 1.28
PACSIN3-211ENST00000539589 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.04■■□□□ 1.28
PACSIN3-211ENST00000539589 ACTN4O43707 911 aaKnown RBP23.03■■□□□ 1.28
PACSIN3-211ENST00000539589 EPS15P42566 896 aa23.03■■□□□ 1.28
PACSIN3-211ENST00000539589 NCAPHQ15003 741 aa23.03■■□□□ 1.28
PACSIN3-211ENST00000539589 NT5DC1Q5TFE4 455 aa23.03■■□□□ 1.28
PACSIN3-211ENST00000539589 KCTD1Q719H9 257 aa23.03■■□□□ 1.28
PACSIN3-211ENST00000539589 PIGSQ96S52 555 aa23.03■■□□□ 1.28
PACSIN3-211ENST00000539589 PYCARDQ9ULZ3 195 aa23.03■■□□□ 1.28
PACSIN3-211ENST00000539589 FOXN1O15353 648 aa23.03■■□□□ 1.28
PACSIN3-211ENST00000539589 DDNO94850 711 aaPredicted RBP23.03■■□□□ 1.28
PACSIN3-211ENST00000539589 HIRAP54198 1017 aaPredicted RBP23.03■■□□□ 1.28
PACSIN3-211ENST00000539589 SMARCE1Q969G3 411 aa23.03■■□□□ 1.28
PACSIN3-211ENST00000539589 BARHL2Q9NY43 387 aa23.03■■□□□ 1.28
PACSIN3-211ENST00000539589 ZBTB21Q9ULJ3 1066 aa23.03■■□□□ 1.28
PACSIN3-211ENST00000539589 STXBP3O00186 592 aa23.02■■□□□ 1.28
PACSIN3-211ENST00000539589 TNFAIP1Q13829 316 aa23.02■■□□□ 1.28
PACSIN3-211ENST00000539589 HEATR3Q7Z4Q2 680 aa23.02■■□□□ 1.28
PACSIN3-211ENST00000539589 HOMER1Q86YM7 354 aa23.02■■□□□ 1.28
PACSIN3-211ENST00000539589 DAGLBQ8NCG7 672 aa23.02■■□□□ 1.28
PACSIN3-211ENST00000539589 EPSTI1Q96J88 318 aa23.02■■□□□ 1.28
PACSIN3-211ENST00000539589 MYL5Q02045 173 aa23.01■■□□□ 1.27
PACSIN3-211ENST00000539589 SLFN13Q68D06 897 aa23.01■■□□□ 1.27
PACSIN3-211ENST00000539589 SYMPKQ92797 1274 aaKnown RBP23.01■■□□□ 1.27
PACSIN3-211ENST00000539589 DEFB129Q9H1M3 183 aa23.01■■□□□ 1.27
PACSIN3-211ENST00000539589 PHF20L1A8MW92 1017 aa23.01■■□□□ 1.27
PACSIN3-211ENST00000539589 MCM7P33993 719 aa23.01■■□□□ 1.27
PACSIN3-211ENST00000539589 CAP2P40123 477 aa23.01■■□□□ 1.27
PACSIN3-211ENST00000539589 SARSP49591 514 aaKnown RBP23.01■■□□□ 1.27
PACSIN3-211ENST00000539589 TERF1P54274 439 aa23.01■■□□□ 1.27
PACSIN3-211ENST00000539589 CCDC144BQ3MJ40 725 aa23.01■■□□□ 1.27
PACSIN3-211ENST00000539589 C17orf53Q8N3J3 647 aaPredicted RBP23.01■■□□□ 1.27
PACSIN3-211ENST00000539589 TRIML1Q8N9V2 468 aa23.01■■□□□ 1.27
PACSIN3-211ENST00000539589 MAN1B1Q9UKM7 699 aa23.01■■□□□ 1.27
PACSIN3-211ENST00000539589 CCDC194A0A1B0GVG4 234 aa23■■□□□ 1.27
PACSIN3-211ENST00000539589 VWA3AA6NCI4 1184 aa23■■□□□ 1.27
PACSIN3-211ENST00000539589 F5H6K3 240 aa23■■□□□ 1.27
PACSIN3-211ENST00000539589 NEMFO60524 1076 aa23■■□□□ 1.27
PACSIN3-211ENST00000539589 SLC16A2P36021 539 aa23■■□□□ 1.27
PACSIN3-211ENST00000539589 ECE1P42892 770 aa23■■□□□ 1.27
PACSIN3-211ENST00000539589 KLRC3Q07444 240 aa23■■□□□ 1.27
PACSIN3-211ENST00000539589 CCDC96Q2M329 555 aa23■■□□□ 1.27
PACSIN3-211ENST00000539589 ANGEL2Q5VTE6 544 aaKnown RBP23■■□□□ 1.27
PACSIN3-211ENST00000539589 ACER1Q8TDN7 264 aa23■■□□□ 1.27
PACSIN3-211ENST00000539589 CCDC12Q8WUD4 166 aaPredicted RBP23■■□□□ 1.27
PACSIN3-211ENST00000539589 RRP36Q96EU6 259 aaKnown RBP23■■□□□ 1.27
PACSIN3-211ENST00000539589 JMJD4Q9H9V9 463 aa23■■□□□ 1.27
PACSIN3-211ENST00000539589 R3HCC1Q9Y3T6 440 aaKnown RBP23■■□□□ 1.27
PACSIN3-211ENST00000539589 SLFN14P0C7P3 912 aa22.99■■□□□ 1.27
PACSIN3-211ENST00000539589 DNTTIP2Q5QJE6 756 aaKnown RBP22.99■■□□□ 1.27
PACSIN3-211ENST00000539589 GPATCH4Q5T3I0 446 aaKnown RBP22.99■■□□□ 1.27
PACSIN3-211ENST00000539589 C9orf131Q5VYM1 1079 aa22.99■■□□□ 1.27
PACSIN3-211ENST00000539589 ADGRF4Q8IZF3 695 aa22.99■■□□□ 1.27
PACSIN3-211ENST00000539589 DCAF4Q8WV16 495 aa22.99■■□□□ 1.27
PACSIN3-211ENST00000539589 DHX58Q96C10 678 aa22.99■■□□□ 1.27
PACSIN3-211ENST00000539589 DACH1Q9UI36 760 aa22.99■■□□□ 1.27
PACSIN3-211ENST00000539589 M0R2N6 131 aa22.99■■□□□ 1.27
PACSIN3-211ENST00000539589 RAD21O60216 631 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms