RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 PRR16Q569H4 304 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 SPOUT1Q5T280 376 aaKnown RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 SPATA1Q5VX52 437 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 KRT12Q99456 494 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 HYOU1Q9Y4L1 999 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 EIF3CLB5ME19 914 aaKnown RBP7.12□□□□□ -1.27
LSAMP-207ENST00000539563 THAP12O43422 761 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 CYP2J2P51589 502 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 YARSP54577 528 aaKnown RBP7.12□□□□□ -1.27
LSAMP-207ENST00000539563 ZNF710Q8N1W2 664 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 EIF3CQ99613 913 aaKnown RBP7.12□□□□□ -1.27
LSAMP-207ENST00000539563 RASSF4Q9H2L5 321 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 LARSQ9P2J5 1176 aaKnown RBP7.12□□□□□ -1.27
LSAMP-207ENST00000539563 RABGAP1Q9Y3P9 1069 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 PLEKHG1Q9ULL1 1385 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 PFDN6O15212 129 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 PDE8BO95263 885 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 TRAPPC10P48553 1259 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 NT5C2P49902 561 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 MUM1L1Q5H9M0 696 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.12□□□□□ -1.27
LSAMP-207ENST00000539563 SDR42E1Q8WUS8 393 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 RIC8AQ9NPQ8 531 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 FAM207AQ9NSI2 230 aaPredicted RBP7.12□□□□□ -1.27
LSAMP-207ENST00000539563 ATG3Q9NT62 314 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 ZNF804BA4D1E1 1349 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 CUL4BQ13620 913 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 MCUR1Q96AQ8 359 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 BEGAINQ9BUH8 593 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 SOS2Q07890 1332 aaPredicted RBP7.12□□□□□ -1.27
LSAMP-207ENST00000539563 A0A0D9SFI3 127 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 GOLGA8KD6RF30 607 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 TROVE2P10155 538 aaKnown RBP eCLIP7.12□□□□□ -1.27
LSAMP-207ENST00000539563 TCP1P17987 556 aaKnown RBP7.12□□□□□ -1.27
LSAMP-207ENST00000539563 IL6STP40189 918 aaPredicted RBP7.12□□□□□ -1.27
LSAMP-207ENST00000539563 CHRNDQ07001 517 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 BBOF1Q8ND07 529 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.12□□□□□ -1.27
LSAMP-207ENST00000539563 TRIM31Q9BZY9 425 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 NDUFB9Q9Y6M9 179 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 PALM3A6NDB9 673 aaPredicted RBP7.12□□□□□ -1.27
LSAMP-207ENST00000539563 K7ENM7 598 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 STAM2O75886 525 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 GSPT1P15170 499 aaKnown RBP7.12□□□□□ -1.27
LSAMP-207ENST00000539563 GABPB1Q06547 395 aaPredicted RBP7.12□□□□□ -1.27
LSAMP-207ENST00000539563 NUF2Q9BZD4 464 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 NLRC4Q9NPP4 1024 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 NRBP2Q9NSY0 501 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 TNKSO95271 1327 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 XDHP47989 1333 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 WDR17Q8IZU2 1322 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 XPOTO43592 962 aaKnown RBP7.12□□□□□ -1.27
LSAMP-207ENST00000539563 POLGP54098 1239 aaPredicted RBP7.12□□□□□ -1.27
LSAMP-207ENST00000539563 XKR9Q5GH70 373 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 RINT1Q6NUQ1 792 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 PPP1R2P3Q6NXS1 205 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 ARMCX5Q6P1M9 558 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 VSIG1Q86XK7 387 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 RDH13Q8NBN7 331 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 U2AF1L4Q8WU68 220 aaKnown RBP7.12□□□□□ -1.27
LSAMP-207ENST00000539563 COPRSQ9NQ92 184 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 ELF2Q15723 593 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 MAP3K21Q5TCX8 1036 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 GADL1Q6ZQY3 521 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 TTLL7Q6ZT98 887 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 IFT122Q9HBG6 1241 aa7.12□□□□□ -1.27
LSAMP-207ENST00000539563 hCG_1642624A0A1W2PR95 340 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 RGS16O15492 202 aaPredicted RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 BCAMP50895 628 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 BPIFB4P59827 614 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 IRX5P78411 483 aaPredicted RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 LMNB2Q03252 620 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 PTH1RQ03431 593 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 KIF22Q14807 665 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 ABCB5Q2M3G0 1257 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 PLA2G4DQ86XP0 818 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 LRRC8AQ8IWT6 810 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 DCPSQ96C86 337 aaKnown RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 MRRFQ96E11 262 aaKnown RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 JPH2Q9BR39 696 aaPredicted RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 TPCN1Q9ULQ1 816 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 YEATS2Q9ULM3 1422 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 AK9Q5TCS8 1911 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 CAPN9O14815 690 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 RNF40O75150 1001 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 GAP43P17677 238 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 BTDP43251 543 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 GYG1P46976 350 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 PTGDRQ13258 359 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 TRMT44Q8IYL2 757 aaKnown RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 RNF26Q9BY78 433 aaPredicted RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 IPO11Q9UI26 975 aaKnown RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 MAP3K4Q9Y6R4 1608 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 KRIT1O00522 736 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 KCNK3O14649 394 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 LMNB1P20700 586 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 PCK1P35558 622 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 ADKP55263 362 aaKnown RBP7.11□□□□□ -1.27
LSAMP-207ENST00000539563 PRPSAP1Q14558 356 aa7.11□□□□□ -1.27
LSAMP-207ENST00000539563 TSNAXIP1Q2TAA8 658 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms